prot_Ecto-sp13_S_contig612.16801.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig612.16801.1
Unique Nameprot_Ecto-sp13_S_contig612.16801.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length304
Homology
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: D8LJK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJK8_ECTSI)

HSP 1 Score: 516 bits (1329), Expect = 1.570e-183
Identity = 264/303 (87.13%), Postives = 271/303 (89.44%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLEAKVATAAQSQTGLQEGGLRLRCVGFVRGNPIL 303
            MYSCSRDTTVRQWNRSGISALRVFEGHDLACTA+ALS DEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSG  SSSV Q               GLR SMT+DGYTFFPL LD SSDGHQ+LTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVF TSKEGGD GSGA +GGYGLSP+P PSLSAPSSRGMIATASKDG+VKIYDLADG ILVDHVEPECGGYTGLAIQRDSRTG PVFYASTITGGLYALRLE KVATA  S+TGL EGGLRLRCVGFVRGNPIL
Sbjct:    1 MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAIALSEDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGGPSSSVVQXXXXXXXXXXXXXXXGLRSSMTVDGYTFFPLFLDVSSDGHQVLTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDGGSGAREGGYGLSPAPWPSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGGPVFYASTITGGLYALRLEEKVATAGTSRTGLGEGGLRLRCVGFVRGNPIL 303          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: A0A6H5JBE9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE9_9PHAE)

HSP 1 Score: 470 bits (1210), Expect = 2.680e-165
Identity = 250/337 (74.18%), Postives = 256/337 (75.96%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAMALSG----------------------------------DEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLEAKVATAAQSQTGLQEGGLRLRCVGFVRGNPIL 303
            MYSCSRDTTVRQWNRSGISALRVFEGHDLACTA+ALS                                   DEK LYSGS      AWDVQTGQC SSAKVPRNLVTCLKCLSGE SSSVAQGGEDLKLRVWD R+GGLRPSMTIDGYTFFPL                           WDLRSPGIPVREYTGHTQDTTACVF TSKEGGDDGSG  + GYG+SPSP  SLSAPSSRGMIATASKDG+VKIYDLADG ILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLE +VATAAQSQT LQEGGLRLRCVGFVRGNPIL
Sbjct:    1 MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAIALSEGDVPSQRKILPARQSILSKLFHDDDPPPYEHSLEDEKALYSGSRDTSIRAWDVQTGQCISSAKVPRNLVTCLKCLSGELSSSVAQGGEDLKLRVWDAREGGLRPSMTIDGYTFFPL---------------------------WDLRSPGIPVREYTGHTQDTTACVFVTSKEGGDDGSGVEENGYGVSPSPSTSLSAPSSRGMIATASKDGTVKIYDLADGSILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLEEEVATAAQSQTELQEGGLRLRCVGFVRGNPIL 310          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: A0A835ZHR6_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHR6_9STRA)

HSP 1 Score: 202 bits (513), Expect = 2.530e-60
Identity = 118/276 (42.75%), Postives = 149/276 (53.99%), Query Frame = 0
Query:    2 YSCSRDTTVRQWNRSGISALRVFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVA-QGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVK--IYDLADGDILVDHVEPE-------CGGYTGLAI---QRDSRTGAPVF-YASTITG 263
            YS SRDTT+ QW + G   L  + GH L  +A+ LS DE  L+SGS       WDV TGQ       PRNLVTCLKC+ GE  ++V  QGGEDLKLR+WD R     P+ T+DG+ +FPLCLD S DG+ +LT  KGFN  GCE +LWD R+ G  V+EY GH QD TAC+ A                        P+  A SS G + TASKD ++K  ++    G +L D  EP         GG   L +   +    T APV   AS++ G
Sbjct:    7 YSASRDTTLAQWGQ-GEGPLATYRGHTLTVSALDLSADETHLWSGSRDTSVRLWDVSTGQQRGMVATPRNLVTCLKCMPGEEGTNVVVQGGEDLKLRLWDFRTPSSVPAQTLDGFVYFPLCLDVSEDGNYLLTGSKGFNSVGCEGRLWDRRT-GQVVQEYNGHAQDVTACLLA------------------------PAALAASSGGAVITASKDQTIKARVWGRESGQLLSDFAEPHRLCAATFTGGLYDLQLSEGEAGGETAAPVLSVASSVAG 256          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: F0YK25_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK25_AURAN)

HSP 1 Score: 163 bits (412), Expect = 9.530e-46
Identity = 96/252 (38.10%), Postives = 125/252 (49.60%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNRSGISAL----RVFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDL----ADGDILVDHVEPECGGYTGLA 244
            +YSCSRD T+ QW+    + L     VF GH+L  TA+A+S D + + SGS       WD  TG    S ++PRN+VTC   L G  +   AQG EDLKLR+WDTR+           YTFFPL  + S DGH I T+ KGFN  GCE ++WD R PG  + +  GH QD T  +F   +                                + +ASKD S+K++DL     D  I VD     CG YT L+
Sbjct:    1 IYSCSRDLTIAQWSLDVEAELDSPVSVFRGHELNVTAVAVSDDGRIVSSGSRDCSVRMWDATTGAERGSVRIPRNVVTCTCWLPG--TPVFAQGSEDLKLRLWDTRNLRKEAVQVFGTYTFFPLATNVSGDGHLIATTSKGFNRQGCEVRVWDRRKPGAALCQMHGHQQDATGIIFLDEQN------------------------------KVVSASKDSSIKVWDLNTFKLDRTIHVDG----CGMYTSLS 216          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: K3WSF6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSF6_GLOUD)

HSP 1 Score: 164 bits (414), Expect = 1.930e-44
Identity = 99/268 (36.94%), Postives = 138/268 (51.49%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNR------SGISALR------VFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRDSRTGAPVF 256
            +YSCSRDTT+   +       S  S+ R         GH L  + +A++ DE +L SG        WD+ TG+  +     +N++TC K +  E    V QG EDL L++WD R     P+ +  GY +F LC+D S DG+  LTS KGFNG GCE ++WD R+ G  + E+ GH QDTT+C F  S  G                SP  S+ A S+  +  TASKDGSVK++D A   +L + +EP  G +T +     S   A  F
Sbjct:   79 IYSCSRDTTIALTSHIASKSSSPSSSSRKQPQPVYLRGHHLNVSTIAVNDDETSLCSGGRDTQTIFWDLTTGRLKAKNTTSQNVITCSKWVPVE--PLVVQGSEDLTLKLWDERTNLRAPAQSFHGYVYFALCVDVSPDGNYFLTSSKGFNGVGCEVRIWDRRT-GKQLYEFNGHQQDTTSCCFLPSATGSSSNDSV--------TSPADSVRA-SAIPIPVTASKDGSVKVWDAATSSVLCEALEPSGGMFTSICAVDSSTVLASTF 334          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: A0A067CE75_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CE75_SAPPC)

HSP 1 Score: 159 bits (402), Expect = 7.220e-43
Identity = 92/250 (36.80%), Postives = 130/250 (52.00%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNRSG----ISALRVFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQ 246
            +Y+CSRDTT+ Q   +      +A + F GH L+ +A+A++  E  L SGS       WDV TG         +N+VTC+  +  +  + VAQGGEDL +R+WD R     P+ TI GY +FPL +DAS DG+ +LTS KGFNG GCE ++WD R+ G  V E   H QD TAC +   K                                  TASKD S++I++ A G+++    +   G +TG+A Q
Sbjct:   93 LYACSRDTTISQQAIASSDVPAAAPQSFTGHTLSVSAIAINAPETHLASGSRDTGTSLWDVTTGTRVQHTTTSQNIVTCMTWVP-QCETLVAQGGEDLCVRLWDARSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRT-GKLVTEMHVHLQDATACAYVRHKNA-----------------------------FAVTASKDSSLRIWNSASGELVASSFDQSSGMFTGVACQ 310          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: T0QNJ3_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QNJ3_SAPDV)

HSP 1 Score: 157 bits (396), Expect = 8.070e-42
Identity = 92/266 (34.59%), Postives = 137/266 (51.50%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNRSGI---SALRVFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITG 263
            +Y+CSRDTT+ Q   S     +A + F GH L+ +A+A++  E  L SGS       WDV T          +N+VTC+  +  +  + +AQGGEDL +R+WDTR     P+ TI GY +FPL +DAS DG+ +LTS KGFNG GCE ++WD R+ G  V E  GH QD +AC +   K             Y +                  TASKD S++I++ A G+++    +   G +T +A +    +     + ++  G
Sbjct:   98 LYACSRDTTISQHVLSSSDAPTAPQSFTGHTLSVSALAINAAESNLASGSRDTGTSLWDVTTRARVQHTTTSQNIVTCMTWVP-QCETLLAQGGEDLCVRLWDTRSWK-SPAQTIQGYVYFPLSIDASDDGNYLLTSSKGFNGVGCEGRVWDRRT-GKLVTEMHGHLQDASACAYMRHKNA-----------YAV------------------TASKDSSLRIWNSASGELITSSFDHSSGMFTSVACRSVETSDEVTVFTTSFAG 331          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: A0A485KVW2_9STRA (Aste57867_12386 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVW2_9STRA)

HSP 1 Score: 155 bits (391), Expect = 8.490e-41
Identity = 89/265 (33.58%), Postives = 133/265 (50.19%), Query Frame = 0
Query:    1 MYSCSRDTTVRQW------------NRSGISALRVFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRDSRTGA 253
            +YSCSRDTT+ +             + + ++    + GH L  +A+A++  E TL SGS       WDV T          +N+VTC+  +  + ++ VAQGGEDL++R+WD R     P+ TI+GY +FPL +  S DGH +LTS KGFN  GCE ++WD R+ G  V E  GH QD TAC +             G+   G+                  TASKD S++++D   GD+L    +   G +T ++   +  T +
Sbjct:  117 LYSCSRDTTIARHTFGSLANDPTTPSPTAVTTHPPYHGHTLTVSALAINESESTLASGSRDTGVSLWDVATSMRRQHTITSQNIVTCMAWVPRD-ANVVAQGGEDLRVRLWDAR-AWKAPTQTIEGYIYFPLSIACSDDGHYLLTSSKGFNAVGCEGRVWDRRT-GKQVAEMRGHAQDATACAYIP-----------GRNHEGI------------------TASKDSSIRVWDTTTGDLLASTQDANAGMFTSVSCVPNDTTSS 349          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: UPI0009E229CA (WD repeat-containing protein 31-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E229CA)

HSP 1 Score: 150 bits (379), Expect = 2.890e-39
Identity = 92/248 (37.10%), Postives = 124/248 (50.00%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRD 248
            +YS SRD T++ W++     L  FEGH L  TA+ L+ D   L+SGS       WD       S  +V RNLV+C+K + G + + VAQ GED  LRVWDTR+  ++P  T     +F    D S DG  ILT   GFNG GCE+ LWD+R+  +  R Y GH Q T+AC+F                        LP L    S+ +IATAS D +VKI++    + +        G  T L +  D
Sbjct:  106 VYSSSRDKTIKAWHQEKNDPLLTFEGHRLVVTAIDLNDDGTLLFSGSRDNCVRLWDTTRKTSVSEKEVSRNLVSCVKWIPG-TQTQVAQTGEDKMLRVWDTRN--MQPVFTFPAQQYFQTYCDCSRDGRFILTCSNGFNGKGCESTLWDVRAQQMICR-YIGHYQTTSACIF------------------------LPRLEHVWSKDLIATASHDSTVKIWEREGTECITTLDCAGAGPLTDLCVWDD 325          
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Match: A0A1V9Z8M6_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z8M6_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.780e-38
Identity = 95/294 (32.31%), Postives = 135/294 (45.92%), Query Frame = 0
Query:    1 MYSCSRDTTVRQWNRSGISALRV-----FEGHDLACTAMALSGDEKTLYSGSXXXXXXAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWDTRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKG-------------FNGAGCETKLWDLRSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSLSAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRDSRTGAPVFYASTITGGLYALRLEAKVAT 276
            +Y+CSRDTT+ ++      A+       F GH L+ +A+ ++G E  L SGS       WDV T          +N+VTC+  +     + VAQGGEDL++R+WD+R     P  TI+GY +FPL LD S DG+ ILTS KG             FNG GCE ++WD R+ G  V E  GH QD TAC +   +                                + TASKD S+++++ A G ++    +   G +T L        G    + S+ TG L         AT
Sbjct:   97 LYACSRDTTISRYRLDFDGAVNTVKMESFAGHSLSVSAITINGSETQLASGSRDTSVSLWDVATTTQLQHTTTSQNIVTCMAWVPIH-DTLVAQGGEDLRVRIWDSR-AWKSPVQTIEGYVYFPLSLDVSDDGNYILTSSKGTILSWICWLMPLGFNGVGCEGRVWDRRT-GKQVCEMAGHLQDATACSYIKQRNE-----------------------------YVLTASKDSSLRVWNSASGALVSSTYDHALGMFTALTSLPPDDAGIVRIFTSSFTGHLAVYAFNTATAT 358          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig612.16801.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJK8_ECTSI1.570e-18387.13Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBE9_9PHAE2.680e-16574.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZHR6_9STRA2.530e-6042.75WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
F0YK25_AURAN9.530e-4638.10Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
K3WSF6_GLOUD1.930e-4436.94Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A067CE75_SAPPC7.220e-4336.80Uncharacterized protein (Fragment) n=1 Tax=Saprole... [more]
T0QNJ3_SAPDV8.070e-4234.59Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A485KVW2_9STRA8.490e-4133.58Aste57867_12386 protein n=1 Tax=Aphanomyces stella... [more]
UPI0009E229CA2.890e-3937.10WD repeat-containing protein 31-like n=1 Tax=Orbic... [more]
A0A1V9Z8M6_9STRA1.780e-3832.31Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 43..57
score: 37.43
coord: 87..101
score: 31.95
coord: 1..14
score: 31.53
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 105..149
e-value: 21.0
score: 8.7
coord: 17..56
e-value: 5.6E-6
score: 35.9
coord: 153..222
e-value: 1.7E-4
score: 31.0
coord: 59..100
e-value: 3.1
score: 13.9
IPR001680WD40 repeatPFAMPF00400WD40coord: 21..56
e-value: 4.9E-4
score: 20.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 24..65
score: 13.984
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1..75
e-value: 1.5E-15
score: 59.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 76..251
e-value: 7.1E-20
score: 73.4
IPR040066WD repeat-containing protein 31PANTHERPTHR19869SPERMATID WD-REPEAT PROTEINcoord: 1..273
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 43..57
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 1..109
score: 20.408
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 2..244

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig612contigEcto-sp13_S_contig612:1239..4788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig612.16801.1mRNA_Ecto-sp13_S_contig612.16801.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig612 1239..4788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig612.16801.1 ID=prot_Ecto-sp13_S_contig612.16801.1|Name=mRNA_Ecto-sp13_S_contig612.16801.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=304bp
MYSCSRDTTVRQWNRSGISALRVFEGHDLACTAMALSGDEKTLYSGSRDT
SIRAWDVQTGQCTSSAKVPRNLVTCLKCLSGESSSSVAQGGEDLKLRVWD
TRDGGLRPSMTIDGYTFFPLCLDASSDGHQILTSCKGFNGAGCETKLWDL
RSPGIPVREYTGHTQDTTACVFATSKEGGDDGSGAGKGGYGLSPSPLPSL
SAPSSRGMIATASKDGSVKIYDLADGDILVDHVEPECGGYTGLAIQRDSR
TGAPVFYASTITGGLYALRLEAKVATAAQSQTGLQEGGLRLRCVGFVRGN
PIL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR040066WDR31
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf