prot_Ecto-sp13_S_contig10141.168.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig10141.168.1
Unique Nameprot_Ecto-sp13_S_contig10141.168.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length454
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10141.168.1 vs. uniprot
Match: A0A6H5JGV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV0_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 8.730e-184
Identity = 283/316 (89.56%), Postives = 290/316 (91.77%), Query Frame = 0 
Query:   72 VMGLSRRVKADVQRAIKVKDDELGEMVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGMLRNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQXXXXXXXXXXXXXRASIADLPVSDESSNATVLGRLSRKCVHTAPSSRHPARAVAKNRPVSAPSGAVERISPRPDQRETTRTPSLARLARVFYQSTVASTASTLGECSSRQQPSSIEYLSGEKPDPAESVCFQASSQPEIYKGEASKDDSHAETTTSVVHGERNGDTIRSSELDGVEKRMESVRLLWA 387
            VMGLSRRVKADVQRAI+VKD ELG+MVAMMDEEELRAL DFGPTGKEDINLWKRDRRKRSWRRLSAFGM+RNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQ             RASIADLPVSDESS AT LGRL  KCVHTAPSSRHPARAVAKNRP SAPSGAVER+SPR DQRET RTPSLARLARVFYQSTVASTASTLGECSSRQQPSSIEYLSGE PDPAESVCFQ SSQPE ++GEASKDDSHA+TTTSVVHGERNGDTIRSS LDGVEKRMESVRLLWA
Sbjct:  146 VMGLSRRVKADVQRAIQVKDYELGKMVAMMDEEELRALVDFGPTGKEDINLWKRDRRKRSWRRLSAFGMVRNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQQQPGIKQQQQRQQRASIADLPVSDESSIATGLGRL--KCVHTAPSSRHPARAVAKNRPASAPSGAVERVSPRQDQRETARTPSLARLARVFYQSTVASTASTLGECSSRQQPSSIEYLSGEIPDPAESVCFQVSSQPEAHEGEASKDDSHAQTTTSVVHGERNGDTIRSSALDGVEKRMESVRLLWA 459
[Close]
BLAST of mRNA_Ecto-sp13_S_contig10141.168.1 vs. uniprot
Match: D7G463_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G463_ECTSI)

HSP 1 Score: 467 bits (1202), Expect = 8.150e-156
Identity = 247/275 (89.82%), Postives = 256/275 (93.09%), Query Frame = 0 
Query:    1 ELKERGQKKRKALTTSVKRITKSQRDSFVRKVTGVTKGSGKACTENALSMPAPRARRIQKNLDTTRYARAEVMGLSRRVKADVQRAIKVKDDELGEMVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGMLRNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQXXXXXXXXXXXXXRASIADLPVSDESSNATVLGRLSRKCVHTAPSSRHPARAVAKNRPVSAPSGAVERISPRPDQ 275
            ELKERGQK+RKALTTSVKRI KSQRDSFVRKV+GVTKGSGKACTENALSMP+PRAR+IQKNLDTTRYARAEVMGLSRRVKADVQRAI+VKDDELG+MVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGM+RNDPSLYRQWAQQRYQRLASQAE TNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQ             RASIADLP+SDESSNA  LGRLSRKCVHTAPSSRHPARAVAKNRP SAPSGA ER+SPRPDQ
Sbjct:  214 ELKERGQKRRKALTTSVKRIPKSQRDSFVRKVSGVTKGSGKACTENALSMPSPRARKIQKNLDTTRYARAEVMGLSRRVKADVQRAIQVKDDELGKMVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGMVRNDPSLYRQWAQQRYQRLASQAEGTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQMQPAIKQQQQRQQRASIADLPMSDESSNAKGLGRLSRKCVHTAPSSRHPARAVAKNRPASAPSGAAERVSPRPDQ 488
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10141.168.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGV0_9PHAE8.730e-18489.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G463_ECTSI8.150e-15689.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig10141contigEcto-sp13_S_contig10141:1..1878 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig10141.168.1mRNA_Ecto-sp13_S_contig10141.168.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig10141 1..1878 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig10141.168.1 ID=prot_Ecto-sp13_S_contig10141.168.1|Name=mRNA_Ecto-sp13_S_contig10141.168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=454bp
ELKERGQKKRKALTTSVKRITKSQRDSFVRKVTGVTKGSGKACTENALSM
PAPRARRIQKNLDTTRYARAEVMGLSRRVKADVQRAIKVKDDELGEMVAM
MDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGMLRNDPSLYRQ
WAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQ
QQPGKKQQQQRQQRASIADLPVSDESSNATVLGRLSRKCVHTAPSSRHPA
RAVAKNRPVSAPSGAVERISPRPDQRETTRTPSLARLARVFYQSTVASTA
STLGECSSRQQPSSIEYLSGEKPDPAESVCFQASSQPEIYKGEASKDDSH
AETTTSVVHGERNGDTIRSSELDGVEKRMESVRLLWAVSQLSTDAVTKKI
MHGYSERQRAREPNRTKWNTPSRRPQPPAGPRNSQVNAHRKERGYNAGRR
IVR*
back to top