Homology
BLAST of mRNA_Ecto-sp13_S_contig10141.168.1 vs. uniprot
Match:
A0A6H5JGV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGV0_9PHAE)
HSP 1 Score: 530 bits (1364), Expect = 8.730e-184
Identity = 283/316 (89.56%), Postives = 290/316 (91.77%), Query Frame = 1
Query: 214 VMGLSRRVKADVQRAIKVKDDELGEMVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGMLRNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQXXXXXXXXXXXXXRASIADLPVSDESSNATVLGRLSRKCVHTAPSSRHPARAVAKNRPVSAPSGAVERISPRPDQRETTRTPSLARLARVFYQSTVASTASTLGECSSRQQPSSIEYLSGEKPDPAESVCFQASSQPEIYKGEASKDDSHAETTTSVVHGERNGDTIRSSELDGVEKRMESVRLLWA 1161
VMGLSRRVKADVQRAI+VKD ELG+MVAMMDEEELRAL DFGPTGKEDINLWKRDRRKRSWRRLSAFGM+RNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQ RASIADLPVSDESS AT LGRL KCVHTAPSSRHPARAVAKNRP SAPSGAVER+SPR DQRET RTPSLARLARVFYQSTVASTASTLGECSSRQQPSSIEYLSGE PDPAESVCFQ SSQPE ++GEASKDDSHA+TTTSVVHGERNGDTIRSS LDGVEKRMESVRLLWA
Sbjct: 146 VMGLSRRVKADVQRAIQVKDYELGKMVAMMDEEELRALVDFGPTGKEDINLWKRDRRKRSWRRLSAFGMVRNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQQQPGIKQQQQRQQRASIADLPVSDESSIATGLGRL--KCVHTAPSSRHPARAVAKNRPASAPSGAVERVSPRQDQRETARTPSLARLARVFYQSTVASTASTLGECSSRQQPSSIEYLSGEIPDPAESVCFQVSSQPEAHEGEASKDDSHAQTTTSVVHGERNGDTIRSSALDGVEKRMESVRLLWA 459
BLAST of mRNA_Ecto-sp13_S_contig10141.168.1 vs. uniprot
Match:
D7G463_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G463_ECTSI)
HSP 1 Score: 467 bits (1202), Expect = 8.150e-156
Identity = 247/275 (89.82%), Postives = 256/275 (93.09%), Query Frame = 1
Query: 1 ELKERGQKKRKALTTSVKRITKSQRDSFVRKVTGVTKGSGKACTENALSMPAPRARRIQKNLDTTRYARAEVMGLSRRVKADVQRAIKVKDDELGEMVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGMLRNDPSLYRQWAQQRYQRLASQAEVTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQXXXXXXXXXXXXXRASIADLPVSDESSNATVLGRLSRKCVHTAPSSRHPARAVAKNRPVSAPSGAVERISPRPDQ 825
ELKERGQK+RKALTTSVKRI KSQRDSFVRKV+GVTKGSGKACTENALSMP+PRAR+IQKNLDTTRYARAEVMGLSRRVKADVQRAI+VKDDELG+MVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGM+RNDPSLYRQWAQQRYQRLASQAE TNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQ RASIADLP+SDESSNA LGRLSRKCVHTAPSSRHPARAVAKNRP SAPSGA ER+SPRPDQ
Sbjct: 214 ELKERGQKRRKALTTSVKRIPKSQRDSFVRKVSGVTKGSGKACTENALSMPSPRARKIQKNLDTTRYARAEVMGLSRRVKADVQRAIQVKDDELGKMVAMMDEEELRALADFGPTGKEDINLWKRDRRKRSWRRLSAFGMVRNDPSLYRQWAQQRYQRLASQAEGTNTDRMLGTTCATDAARRPPWSTDLHYSHRCRAQQMQPAIKQQQQRQQRASIADLPMSDESSNAKGLGRLSRKCVHTAPSSRHPARAVAKNRPASAPSGAAERVSPRPDQ 488
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig10141.168.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 8.73e-184 / Id = 89.56 Expect = 8.15e-156 / Id = 89.82 Sequence A0A6H5JGV0_9PHAE D7G463_ECTSI
Match Name E-value Identity Description
A0A6H5JGV0_9PHAE 8.730e-184 89.56 Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more] D7G463_ECTSI 8.150e-156 89.82 Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Stop 1 Start 0 Seed ortholog score 478.4 Seed ortholog evalue 3.7e-132 Seed eggNOG ortholog 2880.D7G463 Preferred name RPS7 Model size 1362 KEGG ko ko:K02993,ko:K11592 KEGG Pathway ko03010,ko05206,map03010,map05206 KEGG Module M00177 Hectar predicted targeting category other localisation GOs GO:0000184,GO:0000956,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002181,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0003730,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006401,GO:0006402,GO:0006412,GO:0006413,GO:0006518,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009653,GO:0009790,GO:0009792,GO:0009888,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009966,GO:0009967,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010941,GO:0010942,GO:0014020,GO:0015031,GO:0015833,GO:0015935,GO:0016070,GO:0016071,GO:0016072,GO:0016331,GO:0019222,GO:0019439,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0021915,GO:0022613,GO:0022626,GO:0022627,GO:0023051,GO:0023056,GO:0030097,GO:0030154,GO:0030162,GO:0030234,GO:0030684,GO:0030686,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031647,GO:0031974,GO:0031981,GO:0032040,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033365,GO:0034470,GO:0034613,GO:0034641,GO:0034645,GO:0034655,GO:0034660,GO:0035148,GO:0035239,GO:0035295,GO:0042176,GO:0042177,GO:0042254,GO:0042274,GO:0042886,GO:0042981,GO:0043009,GO:0043043,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045047,GO:0045184,GO:0045861,GO:0046483,GO:0046700,GO:0046907,GO:0048027,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048584,GO:0048598,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0051171,GO:0051172,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0051438,GO:0051444,GO:0051641,GO:0051649,GO:0051726,GO:0055105,GO:0055106,GO:0060255,GO:0060429,GO:0060562,GO:0060606,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072175,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0090150,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901796,GO:1901798,GO:1902253,GO:1902255,GO:1902531,GO:1902533,GO:1903050,GO:1903051,GO:1903320,GO:1903321,GO:1903362,GO:1903363,GO:1904666,GO:1904667,GO:1990904,GO:1990948,GO:2000058,GO:2000059,GO:2001233,GO:2001235,GO:2001242,GO:2001244 Exons 3 EggNOG free text desc. structural constituent of ribosome EggNOG OGs KOG3320@1,KOG3320@2759 Ec32 ortholog description Ribosomal protein S7e Ec32 ortholog Ec-02_001430.1 Cds size 1362 COG Functional cat. J Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE br01610,ko00000,ko00001,ko00002,ko01000,ko03011,ko03036
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1681462510.3731031-CDS-Ecto-sp13_S_contig10141:0..93 1681462510.3731031-CDS-Ecto-sp13_S_contig10141:0..93 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10141 1..93 + 1681462510.3848953-CDS-Ecto-sp13_S_contig10141:353..473 1681462510.3848953-CDS-Ecto-sp13_S_contig10141:353..473 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10141 354..473 + 1681462510.394291-CDS-Ecto-sp13_S_contig10141:729..1878 1681462510.394291-CDS-Ecto-sp13_S_contig10141:729..1878 Ectocarpus species13 EcNAP12_S_4_19m CDS Ecto-sp13_S_contig10141 730..1878 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig10141.168.1
>prot_Ecto-sp13_S_contig10141.168.1 ID=prot_Ecto-sp13_S_contig10141.168.1|Name=mRNA_Ecto-sp13_S_contig10141.168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=454bp
ELKERGQKKRKALTTSVKRITKSQRDSFVRKVTGVTKGSGKACTENALSM back to top mRNA from alignment at Ecto-sp13_S_contig10141:1..1878+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig10141.168.1 ID=mRNA_Ecto-sp13_S_contig10141.168.1|Name=mRNA_Ecto-sp13_S_contig10141.168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1878bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10141:1..1878+ (Ectocarpus species13 EcNAP12_S_4_19m)GAGCTGAAGGAACGCGGGCAGAAAAAAAGGAAGGCATTGACAACCTCGGT
CAAGCGCATCACGAAGTCTCAACGAGACAGCTTCGTCCGAAAA GTGATTT
CCAGATGATGTTGATGGAAGCAGGCATCAGCACTGCCCCTTTACCTTTCA
GTCGTAGTCGCAATGAGTACCGCGTGTGTTGCTGACGACGTGCATACGAG
GTTCGATAGAGTGATTTCATTCGCACGGCTTGTCTGCTATGGTGTTTTAC
GCGACACGTTGATCAAGCGTTCGTCACAGCTGCATGTGATACGCACGTTG
CAAAGAACGATGAAAGCCACACGTCACAATTTTACGATGATGCCTATCCT
CAGGTTACTGGCGTTACCAAAGGCAGTGGTAAAGCTTGCACCGAAAACGC
ATTATCGATGCCGGCTCCTAGGGCACGAAGAATACAGAAGAACCTCGATA
CCACGCGATACGCCCGGGCAGAG GTAGGCATGTGCTATGTGCTCGCCCTC
TTGTAGTGCGTGACTTACCGCGGTCTCAGGGCGTGCCCCGTTGTCGTGGT
GAGAACAATTGCACTGTTTCAAATCACTACGCATGCCATCCGAGTGACAC
ACGCCGCACCTGTGCCGTGCCCTTGTCGACAAACAAAGTGGGCCATGTTT
CAGCGAAACGCCCTTGCATGTACCTACCCGCGTCGGCCATCCGAGTGACA
CACGCCATCCTTTTCACGACCCGGAACAGGTGATGGGTTTGAGTAGACGC
GTGAAGGCAGACGTTCAGCGTGCTATTAAGGTCAAAGATGATGAGCTGGG
GGAAATGGTAGCCATGATGGACGAGGAAGAGCTCCGTGCGCTGGCGGACT
TCGGACCTACGGGAAAGGAGGACATCAACCTCTGGAAACGAGATCGTCGA
AAACGGTCATGGCGACGTCTTTCTGCCTTTGGGATGCTTCGAAATGACCC
ATCCCTTTACCGCCAATGGGCCCAGCAGCGATATCAACGCTTGGCATCAC
AAGCTGAGGTCACGAACACCGACCGTATGCTTGGGACTACCTGCGCTACC
GATGCCGCCCGCCGGCCACCTTGGTCGACGGACCTCCATTACTCGCACAG
ATGTCGCGCACAGCAACAGCAACCCGGAAAAAAGCAGCAGCAACAGCGAC
AGCAACGCGCCTCCATTGCAGACCTGCCCGTGTCTGACGAGAGCTCGAAT
GCTACAGTTCTGGGGCGACTGTCTCGAAAATGTGTCCACACGGCCCCTTC
CTCGAGACATCCGGCAAGGGCGGTCGCGAAAAATCGACCGGTTTCGGCGC
CTTCGGGGGCGGTAGAAAGGATATCACCCCGGCCAGACCAACGTGAGACC
ACAAGGACCCCAAGTTTGGCGAGACTTGCAAGGGTTTTCTACCAGTCGAC
CGTGGCGTCAACCGCTTCTACGCTCGGGGAATGTTCGAGTCGGCAGCAGC
CTTCAAGTATTGAGTACCTTTCAGGAGAAAAACCAGACCCCGCTGAAAGC
GTGTGTTTCCAAGCTTCCTCTCAGCCGGAAATATACAAAGGCGAGGCGAG
CAAGGACGACAGCCATGCTGAAACAACGACTAGCGTAGTGCACGGAGAAC
GGAACGGTGACACAATTCGTTCATCAGAGCTGGACGGTGTTGAGAAGCGC
ATGGAGAGCGTGCGCTTGCTGTGGGCGGTGTCACAGCTTTCGACCGACGC
CGTAACCAAGAAAATTATGCATGGGTACTCAGAGCGACAGCGAGCCAGAG
AGCCGAACAGGACAAAGTGGAACACGCCGTCCCGTAGGCCTCAGCCACCA
GCGGGTCCCCGTAACTCCCAGGTCAACGCCCATAGAAAAGAACGAGGTTA
TAACGCGGGCAGGCGTATCGTTCGCTGA back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig10141:1..1878+
>mRNA_Ecto-sp13_S_contig10141.168.1 ID=mRNA_Ecto-sp13_S_contig10141.168.1|Name=mRNA_Ecto-sp13_S_contig10141.168.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1362bp|location=Sequence derived from alignment at Ecto-sp13_S_contig10141:1..1878+ (Ectocarpus species13 EcNAP12_S_4_19m) back to top