prot_Ecto-sp13_S_contig6115.16797.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6115.16797.1
Unique Nameprot_Ecto-sp13_S_contig6115.16797.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length346
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6115.16797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 192..202
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 322..345
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 233..256
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..169
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 289..299
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 268..288
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 89..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 170..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 257..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 175..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 203..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 222..232
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 300..321
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..149
NoneNo IPR availableTMHMMTMhelixcoord: 234..256
NoneNo IPR availableTMHMMTMhelixcoord: 89..108
NoneNo IPR availableTMHMMTMhelixcoord: 150..172
NoneNo IPR availableTMHMMTMhelixcoord: 300..322
NoneNo IPR availableTMHMMTMhelixcoord: 263..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6115contigEcto-sp13_S_contig6115:2668..5091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6115.16797.1mRNA_Ecto-sp13_S_contig6115.16797.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6115 2423..6047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6115.16797.1 ID=prot_Ecto-sp13_S_contig6115.16797.1|Name=mRNA_Ecto-sp13_S_contig6115.16797.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=346bp
MLFSNLFVKLRDFNAAVDRMTPEQRKCCAETFSRIAMGEPVGVPRSCWAD
GTNCPLMKGLGQPGNLHQTTQLDPAISKKQSWPNGHSCYAPRGILVFAST
SIFSLWMIRKVSRFMIRLLLARVPEPRALQSSLCRLVQMGMRTARHAAKV
VDWVFIVSVVCSLHCPTGVTPLDWSTLALGISGTSVVFLALGDVEKHLDS
PVLLRFLSSSYCGSTLAAEVARLPGFDWENFETLVLGFGGGGVWIVGLNN
IHLFCALSDIVTNPLVRLAAATAAAASTAIAAVVLFYMDKPGDSKSMEST
IMFYACASTSPLLLLFIRQVLPARLMERLRNSSVLTDVARLVCWR*
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