mRNA_Ecto-sp13_S_contig6114.16796.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6114.16796.1
Unique NamemRNA_Ecto-sp13_S_contig6114.16796.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: D7FUV4_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV4_ECTSI)

HSP 1 Score: 555 bits (1430), Expect = 1.350e-189
Identity = 312/321 (97.20%), Postives = 317/321 (98.75%), Query Frame = 1 
Query:    1 MSSTLFTFAKSQMAANERESELKDARRALEERLSSLEAEKLMNASRESSEFRAELVEARMKAQQTAAVQQQHSKEMEAERVARVKLETESEMRAKAAVADKAALREELVVAEERQVELEAEVRGLKAAVVDAQTNAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            MSSTL TFAKSQMAANERESELKDARRALEERLSSLEAEKLMNASRESSEFRAELVEARMKAQQTAAVQQQHSKEMEAERVARVKLETESE+RA+AA ADKAALREELVVAEERQ+ELEAEVRGLKAAVVDAQTNAEQLEEMSRAQGELEVLRRRLEALSK+KENVA+ ASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGP EVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ
Sbjct:  602 MSSTLSTFAKSQMAANERESELKDARRALEERLSSLEAEKLMNASRESSEFRAELVEARMKAQQTAAVQQQHSKEMEAERVARVKLETESEIRAQAATADKAALREELVVAEERQLELEAEVRGLKAAVVDAQTNAEQLEEMSRAQGELEVLRRRLEALSKEKENVAIGASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPEEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 922
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BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A6H5JJH6_9PHAE (Kinesin motor domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJH6_9PHAE)

HSP 1 Score: 501 bits (1290), Expect = 9.790e-165
Identity = 301/380 (79.21%), Postives = 308/380 (81.05%), Query Frame = 1 
Query:    1 MSSTLFTFAKSQMAANERESELKDARRALEERLSS---------------------------LEAEKLMNASRESSEFRAELVEARMKAQQT--------------------------------AAVQQQHSKEMEAERVARVKLETESEMRAKAAVADKAALREELVVAEERQVELEAEVRGLKAAVVDAQTNAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            MSSTL TFAKSQMAANERESELKDARRA                                  L  E+LMNASRESSEFRAELVEARMKAQQ                                 AAVQQQHSKEMEAERVARVKLETESE+RA+AA+ADKAALREELVVAEERQVELEAEVRGL+AAVVDAQTNAEQLEEMSRAQGELEVLRRRLEALSK+KENVA+ ASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGP EVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ
Sbjct:  671 MSSTLSTFAKSQMAANERESELKDARRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLKEQLMNASRESSEFRAELVEARMKAQQAIETLAVEKEARLRAETKEEDERRERISTTAQMAAVQQQHSKEMEAERVARVKLETESEIRAQAAMADKAALREELVVAEERQVELEAEVRGLRAAVVDAQTNAEQLEEMSRAQGELEVLRRRLEALSKEKENVAIGASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPEEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 1050
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BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A835YR54_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR54_9STRA)

HSP 1 Score: 231 bits (589), Expect = 3.040e-68
Identity = 143/263 (54.37%), Postives = 175/263 (66.54%), Query Frame = 1 
Query:  226 MEAERVARVKLETESEMRAKAAVADKA--ALREELVVAEERQVELEAEVRGLKAAVVDAQTNA--EQLEEMSRAQ----------GELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLI---GDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            +EAER    + E E      AA A++A   LR  L  AEER  ELEAE R L+ A+  A ++   E L+E++RA           G+L++ R RL AL  D+ +      A V EL+ KV +GE+QRRK+HNL+QELRGNVRV+ARVRPFLP D    G  PA+  +GDGV CV+ KR     GD G     +  +F+FD+ FPPSAGQE VF EVSEFVQSALDG+NVCLFSYGQTGSGKTHT+ GSGAG MRG+IPRAMEQ
Sbjct:    9 LEAERGRTQRAEAERIAAETAAAAEQAQKVLRTSLRAAEERSTELEAEARTLREAMQSATSSVTQEHLQELTRAXXXXXXXXXXXGDLDIARVRLAALEADRLSERQRLEAAVAELDGKVRDGEVQRRKLHNLVQELRGNVRVYARVRPFLPDDQAPAGAAPAISARGDGVSCVIVKRDAQRGGDGGSGAVVKTDTFAFDRVFPPSAGQEAVFAEVSEFVQSALDGYNVCLFSYGQTGSGKTHTVVGSGAGPMRGIIPRAMEQ 271
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BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A4D9D7S4_9STRA (Kinesin motor domain-containing protein n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7S4_9STRA)

HSP 1 Score: 228 bits (582), Expect = 4.890e-64
Identity = 151/299 (50.50%), Postives = 196/299 (65.55%), Query Frame = 1 
Query:   70 DARRALEERLSSLEAEKLMNASRESSEFRAELVEARMKAQ-QTAAVQQQHSKEMEAERVARVKLETESEMRAKAAVADKAALREELVVAEERQVELEAEVRGLKAAVVDAQTNAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            +A+ AL+E  +SL  EK + +  E  E  AE  E R+ A  Q  A+QQ +  EME +R  +++   E E RA+    ++  L  E   A+E  + LE+E++ L+ A+ DA++  EQL+E+++  GE EVLR RL    +D+E  A     +V +LE  V EGELQRRKMHNLIQELRGNVRV+ARVRPFLPSD V       +          + K+    +G  L  E+  F+FD+CFPPSAGQE VF EVSEFVQSALDG+NVCLFSYGQTGSGKTHTMQG G+G M+G+IPRAMEQ
Sbjct:  546 EAQAALQELRASLAVEKELRSRAEGKE--AEEREERVAANAQLLAMQQAYGTEMENQRAEKMEAVKEWERRAQDGEQERERLLRENRDAQETAMTLESELKTLRRALEDAESRTEQLQELAQISGEAEVLRHRLLEADRDREMGAEKYRQQVSDLEKAVQEGELQRRKMHNLIQELRGNVRVYARVRPFLPSDQVDASAQHCINVSAHDDSLAILKKDGSSDGNVL--ESHGFTFDRCFPPSAGQEVVFAEVSEFVQSALDGYNVCLFSYGQTGSGKTHTMQGFGSGPMKGIIPRAMEQ 840
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BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A7S4VFE5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VFE5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 2.070e-58
Identity = 120/217 (55.30%), Postives = 151/217 (69.59%), Query Frame = 1 
Query:  319 ELVVAEERQVELEAEVRGLKAAVVDAQT--NAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            EL+  +E    LE E+  LK A+ D +   NA+  EE+ R  GE+ VL+ RL+A S+   ++  + + +V  LEA++ EG+ +RR+MHN+IQELRGNVRVFARVRPFLP DGVG    P +  K +    VLSK      G E P     F+FD+ FPPS GQ+ VF EVSEFVQSALDG++VCLFSYGQTGSGKTHTMQGSG G MRG+IPRA+EQ
Sbjct:  314 ELLEEKEINTALEGELTSLKQALNDEKNKENAKSAEEIGRLNGEINVLKERLKAESEKSMSLGQATAEQVAALEAQIREGQAERRRMHNVIQELRGNVRVFARVRPFLPGDGVGGDAQPCITPKNE-TSLVLSK------GDEYP-----FTFDRVFPPSVGQQSVFDEVSEFVQSALDGYSVCLFSYGQTGSGKTHTMQGSGVGQMRGIIPRAIEQ 518
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BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A7S3HL69_9STRA (Kinesin-like protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HL69_9STRA)

HSP 1 Score: 200 bits (509), Expect = 5.430e-57
Identity = 113/193 (58.55%), Postives = 138/193 (71.50%), Query Frame = 1 
Query:  391 DAQTNAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVP--AVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            ++  + E  E +SR  GELEV+RRRL  L+  +EN +MS + K+ E E K+  GE+QRRK+HNL+QELRGNVRVFARVRPFLP+DG+   ++P   +  +GD     + K        E   E  +FSFDK F PS  QE +F EVSEFVQSALDG+NVCLFSYGQTGSGKTHTMQGSG G MRG+IPRAMEQ
Sbjct:    7 NSSVSPETAEHISRVTGELEVMRRRLGELTASQENQSMSEAKKIAEYEDKLRAGEVQRRKLHNLVQELRGNVRVFARVRPFLPNDGLDMTKLPDPTITARGDMNSLRIYKAPATS---EERVEDHNFSFDKVFGPSVSQEALFEEVSEFVQSALDGYNVCLFSYGQTGSGKTHTMQGSGNGSMRGVIPRAMEQ 196
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A7S4V4X5_9STRA (Kinesin-like protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V4X5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 8.120e-57
Identity = 120/217 (55.30%), Postives = 151/217 (69.59%), Query Frame = 1 
Query:  319 ELVVAEERQVELEAEVRGLKAAVVDAQT--NAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            EL+  +E    LE E+  LK A+ D +   NA+  EE+ R  GE+ VL+ RL+A S+   ++  + + +V  LEA++ EG+ +RR+MHN+IQELRGNVRVFARVRPFLP DGVG    P +  K +    VLSK      G E P     F+FD+ FPPS GQ+ VF EVSEFVQSALDG++VCLFSYGQTGSGKTHTMQGSG G MRG+IPRA+EQ
Sbjct:  314 ELLEEKEINTALEGELTSLKQALNDEKNKENAKSAEEIGRLNGEINVLKERLKAESEKSMSLGQATAEQVAALEAQIREGQAERRRMHNVIQELRGNVRVFARVRPFLPGDGVGGDAQPCITPKNE-TSLVLSK------GDEYP-----FTFDRVFPPSVGQQSVFDEVSEFVQSALDGYSVCLFSYGQTGSGKTHTMQGSGVGQMRGIIPRAIEQ 518
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A7S4JBW0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JBW0_9STRA)

HSP 1 Score: 202 bits (515), Expect = 6.800e-55
Identity = 118/206 (57.28%), Postives = 147/206 (71.36%), Query Frame = 1 
Query:  352 LEAEVRGLKAAVVDAQT--NAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            LEAE   LK A+ D +   NA+  E++ +  GE+ VL+ RL+A  +  + V+++ + KV  LEA + EG+ +RR+MHNLIQELRGNVRVFARVRPFLP+DGV     P VV K +       K    D+G+E      SFSFD+ FPPS GQE VF EVSE VQSALDG+NVCLFSYGQTGSGKTHTMQGSG+G MRG+IPR++EQ
Sbjct:  871 LEAERDSLKEAMKDQKNMVNAKSAEDIGQLMGEINVLKERLKAEEQKSKFVSVAGAEKVAALEATIREGQAERRRMHNLIQELRGNVRVFARVRPFLPNDGVSDDAEPFVVPKSES----SLKLKKSDDGQEY-----SFSFDRVFPPSVGQEAVFDEVSELVQSALDGYNVCLFSYGQTGSGKTHTMQGSGSGAMRGIIPRSIEQ 1067
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A7S0BX78_9STRA (Kinesin-like protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BX78_9STRA)

HSP 1 Score: 191 bits (486), Expect = 9.410e-52
Identity = 112/220 (50.91%), Postives = 148/220 (67.27%), Query Frame = 1 
Query:  316 EELVVAEERQVELEAEVRGLKAAVVDA----QTNAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            E L +++ER   L+ E   LK A++ A    + N  ++EE++  +GE+ V+  ++E ++++KE   +S    +  LEA + +   +RR MHN IQELRGNVRVFARVRPFLP+D V     P++V KG+    VL      DN +E+      FS+D+ F PS  QE VF EVSEFVQSALDG+NVCLFSYGQTGSGKTHTMQGSG G MRG+IPRA+EQ
Sbjct:  188 ENLAISKERISRLQVECSSLKEALLKADGVEEENRNKIEEIADLRGEVHVMNEKIELITEEKEAANVSNKRAIATLEASITKFRKERRAMHNTIQELRGNVRVFARVRPFLPNDNVPADTEPSIVPKGEQDISVLK-----DNDEEV-----KFSYDRVFQPSVSQESVFAEVSEFVQSALDGYNVCLFSYGQTGSGKTHTMQGSGQGQMRGIIPRAIEQ 397
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Match: A0A7S4S9M0_9STRA (Kinesin-like protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9M0_9STRA)

HSP 1 Score: 189 bits (481), Expect = 4.610e-51
Identity = 109/206 (52.91%), Postives = 136/206 (66.02%), Query Frame = 1 
Query:  352 LEAEVRGLKAAVVDAQ--TNAEQLEEMSRAQGELEVLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRGNVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPPEAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKTHTMQGSGAGDMRGMIPRAMEQ 963
            LE E+  LK A+ D +    A+  E+MSR +GE+   R RL+       N       KV+ELE ++L+G  +RR++HN+IQELRGNVRVFAR+RPFLP D V     P +  K +     L  R+  D      P   +F+FD  FPPSAGQE VF E SEF+QSALDG+NVCLFSYGQTGSGKTHTMQGSG G MRG+IPR++EQ
Sbjct:  203 LEVEIDALKQALNDQRGMVEAKHAEDMSRLKGEIGAFRERLKMEEIRFVNAKRQYGQKVKELEEEILKGNAERRRLHNVIQELRGNVRVFARIRPFLPGDNVDDDTRPCITHKSE---KSLKLRMSEDE-----PWQHNFTFDAVFPPSAGQEAVFNEASEFIQSALDGYNVCLFSYGQTGSGKTHTMQGSGVGQMRGIIPRSIEQ 400
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6114.16796.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUV4_ECTSI1.350e-18997.20Kinesin motor domain-containing protein n=1 Tax=Ec... [more]
A0A6H5JJH6_9PHAE9.790e-16579.21Kinesin motor domain-containing protein (Fragment)... [more]
A0A835YR54_9STRA3.040e-6854.37P-loop containing nucleoside triphosphate hydrolas... [more]
A0A4D9D7S4_9STRA4.890e-6450.50Kinesin motor domain-containing protein n=5 Tax=Mo... [more]
A0A7S4VFE5_9STRA2.070e-5855.30Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S3HL69_9STRA5.430e-5758.55Kinesin-like protein (Fragment) n=1 Tax=Spumella e... [more]
A0A7S4V4X5_9STRA8.120e-5755.30Kinesin-like protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4JBW0_9STRA6.800e-5557.28Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0BX78_9STRA9.410e-5250.91Kinesin-like protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4S9M0_9STRA4.610e-5152.91Kinesin-like protein (Fragment) n=2 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6114contigEcto-sp13_S_contig6114:1984..7960 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score558.5
Seed ortholog evalue2e-156
Seed eggNOG ortholog2880.D7FUV4
Model size963
KEGG koko:K07936,ko:K10406
KEGG Pathwayko03008,ko03013,ko05166,ko05169,map03008,map03013,map05166,map05169
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0239@2759
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-26_004350.1
Cds size963
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03009,ko03016,ko03019,ko03036,ko04031,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6114.16796.1prot_Ecto-sp13_S_contig6114.16796.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6114 1984..7960 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463852.4802785-CDS-Ecto-sp13_S_contig6114:1983..21551681463852.4802785-CDS-Ecto-sp13_S_contig6114:1983..2155Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6114 1984..2155 -
1681463852.4937243-CDS-Ecto-sp13_S_contig6114:2991..31941681463852.4937243-CDS-Ecto-sp13_S_contig6114:2991..3194Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6114 2992..3194 -
1681463852.505888-CDS-Ecto-sp13_S_contig6114:3501..36581681463852.505888-CDS-Ecto-sp13_S_contig6114:3501..3658Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6114 3502..3658 -
1681463852.5147045-CDS-Ecto-sp13_S_contig6114:4451..45971681463852.5147045-CDS-Ecto-sp13_S_contig6114:4451..4597Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6114 4452..4597 -
1681463852.5233731-CDS-Ecto-sp13_S_contig6114:4951..50441681463852.5233731-CDS-Ecto-sp13_S_contig6114:4951..5044Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6114 4952..5044 -
1681463852.5318487-CDS-Ecto-sp13_S_contig6114:6134..62061681463852.5318487-CDS-Ecto-sp13_S_contig6114:6134..6206Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6114 6135..6206 -
1681463852.539791-CDS-Ecto-sp13_S_contig6114:7840..79601681463852.539791-CDS-Ecto-sp13_S_contig6114:7840..7960Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6114 7841..7960 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6114.16796.1

>prot_Ecto-sp13_S_contig6114.16796.1 ID=prot_Ecto-sp13_S_contig6114.16796.1|Name=mRNA_Ecto-sp13_S_contig6114.16796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=321bp
MSSTLFTFAKSQMAANERESELKDARRALEERLSSLEAEKLMNASRESSE
FRAELVEARMKAQQTAAVQQQHSKEMEAERVARVKLETESEMRAKAAVAD
KAALREELVVAEERQVELEAEVRGLKAAVVDAQTNAEQLEEMSRAQGELE
VLRRRLEALSKDKENVAMSASAKVEELEAKVLEGELQRRKMHNLIQELRG
NVRVFARVRPFLPSDGVGPGEVPAVVGKGDGVGCVLSKRLIGDNGKELPP
EAQSFSFDKCFPPSAGQEEVFTEVSEFVQSALDGFNVCLFSYGQTGSGKT
HTMQGSGAGDMRGMIPRAMEQ
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mRNA from alignment at Ecto-sp13_S_contig6114:1984..7960-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6114.16796.1 ID=mRNA_Ecto-sp13_S_contig6114.16796.1|Name=mRNA_Ecto-sp13_S_contig6114.16796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=5977bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6114:1984..7960- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCGACGCTGTTCACCTTCGCCAAGTCTCAGATGGCGGCCAACGA
GCGGGAGTCCGAGCTGAAGGACGCACGGAGGGCGCTGGAAGAACGCCTTT
CCTCTCTAGAAGCAGAGAAGGTGTGCTTTCCCTCCCGGCGCAGTCGCATG
GGGGTGGAGGGTGAAGGGGGAGGCGTACTCACTCATCTGAACACATGCCG
TAATCAGAAGACCATATACCTCGCATCCTCACAATGCCGGGTAGGAGTAG
TTTGCCGGGTTTTCGCTGGCCAAGGCTACCGCAGTCGCAGGAGGGGGGGA
GGGGCGGGCGTCAGTGGTGCTGTCCGAGACCCTCAACAGCGCTGTCCGGG
ATAAATACAGCGGAGCCCCTAAGTGGCGCCGGTGGCATGTCGTCGCTCGG
GTCTTGGCGACCATATGAAAACCTAGCTGTGTACGTTTTCCAATGTCCGA
GGAGCAGGGGCGGGTGAAACACTATTGCGAGACCCTCGGCGTCCCGCATT
TAGCGTGTGAAGTGTTGTCTGCCATGGTCCCTCGGCAGTGCCGGTCGGGC
ACTAGTGTGTCAACTTTCGCCTCTGATGCCTTGGTACCGAAGAGCCTAGT
TCCTCTTAAGGATTCCGGTGTTTCGGAGGTGTTTTACCACATTAAGCGTC
ACAGAAACTTTCGATGCGAGGACTGCAAGTTCAGCATTTGCCATCAAGTA
GCACCAGCAACACTCGGGTGGTACTTCCAGGATGCGGGGGCAGGTACATG
TACTTCGTTTCCCAAACAAGATGGAAGCGGCAGTGTTTGTTTCTCACACA
CTACCCGACACAAATGCTGTGAGCGCTGATTTAGAGTGATGAACAAAAAT
TCACAAAAATTAACACACACCGACTTGTTGCCTTCATAACCTGTTCGCTT
GTTGTGATGTGTTTGCTGCCCGGTGCGGCATCCCCACTTGTTTCTTTTTC
TTTTTGCAGTCGAGCCTGTCGACCGAGCTGTCATCGCGAGACACGGGCAT
GGCTTCTCTCACCGCGGAGATCAACCTGCTCAAGGAACAGGTGATTGATT
GTGCCACTGCTGGCTGTTTCTCTATTGATTTCTGCAACTGAACGGCCCCC
GCTGTCTTTTTTTTTTTGTGGTCAACGAACAAAAAAAGAACAGAGGGCCT
TCTTCGTGTTGCCATTGGCTTGTTTGGCTGTTGTTGCGTGGCACCTGCGT
TGTTTCTCGTGTGAGGCCGTCGCGAAATGTCGAGTGCAACGTACAGATAG
CGCTCCTTGTCTAGTGTAATGTATTGTACAGATCGCTCCACTACGCAAAA
TCTAGTGTAATGTATGTACGGATAGCGCCCGTGCTCTGATAGTTTGGTAG
TAACAGTGGAGAACTTCATGTTCAACGTTACATCAAACACAATAAACTTA
AGCACCATTCCTGAGTCCGGCTTAGAGCCCGTTCTTTGGAGCCTATATGC
GTAGCGGCATTTGTAGCTTGCAAGAGGAAAACGGAGAGGCTGGTCTCGGC
CGAAGCTAGCGGTTATTTAGTGCGGGCGCAATCTGTGGCTAAATCGTCAA
TGGCGACGGCACGATGCAGGCACGAAAGACCTACTATTATGCGAGGACGA
GACATTCCCGTGCCGTGCGAGCGCGGAGCGGGGCACGGCACAGCGGTTGT
GTTTCCCTCTTGAGACACCACGCCCTTACGCCAGCCTTGCACATGTGCTG
ACCTTGGCTCCCTGAACCTCTTTCTTTCTTGGTCACTCTCTCGCCGCCGC
ACAGCTCATGAACGCCAGCAGAGAGTCCTCGGAGTTCCGAGCGGAGCTTG
TGGAGGCAAGGATGAAGGCTCAGCAGGTAAATAGACGTGATGTCATGCCG
TTTTTCAATCCGATTGTTGTATTCTACGTCAGATTTTTCCACGCACACCC
GTCCTGGCTAGCCTGGGCCGACGAAACACACGGCTTGTCGCGCCGTCCCG
GCATGATTCGAGATCAATGATCTAACGACTACGACATGCATTTACATGAG
TATACCCCCCCCTTTTCCTGACTGACAATGTCTGCCGGGAATCTTCATAT
CGCTTTTGAGTTGTGTGCACAAAAGTGTCCTCCGTGTGAAGGCCGGGATG
AAGTCTGGGCTGGAAGGCCCCGCGATCAGAAGAAGCGGTCGATCCTCCCG
CTGGGACTGCTCTGCCGCAATTATTTGTTTTCGCCTTGCTTCTCTCCATG
TGCACGCTGTAGCTTTTTTTGGCACGAGGGACAGGCGGGGGCGGGGCGGG
GCACGGGCGCGATGTGGTTTGTGGCCGAACTATCAAGAACAACCTATTGC
TTATACACTTGTTGAAAAAGGAGCTCTGGTTGTTGTTGTTGATGCCGTTG
TTGTTGTTGTCGCTGTGATTGTTATTTTCGGGAGAAAGCGATTCTCGTCG
GCCACACGTCGTTCTGGCCCCCTTTTTCGGTTGCAGTGGAGGAAGCGTCC
TTTGCCAGCCCCCCTCTGTCTCCACTCCACGGCACCCCTCCGGCGAGGTA
GCTCCCGATCATTTTGCGGTGCCCCTACCGAGAACAACAACCGCGCGCTC
CTTCCCTCAAGGGGTGCGTGGGGAAACGTCCCAACGACTAATCTATGCCT
CCATGGGCGAGCGCGGGCAACGATCGAAACAATACATGGGTCCACACCTA
TGTACGACGGCAACCAGCAGAACACCCACCCCTATCTCTGCCCTTTAGGG
TTCTCTCCCTTTAGGGGTGCATGGGCCAAGTTCGAATCGATATTTTCACA
CGTATCTTATCTACGTACGCTTGCAACCAAAGAAGCCCCCATTCCCCCCC
CCCGCGACGCCGCTTTCTAGGCAGTCGAGACCCTGGCGGTGGAAAAGGAG
GCCAGGCTGAGAGCCGAAACAAAAGAGGAGGATGAGAGGCGCGAAAGGAT
CTCCACCACCGCACAGACGGCCGCCGTACAGCAGCAGCACTCGAAGGAGA
TGGAGGCCGAGCGCGTCGCCAGGGTCAAGCTCGAGACGGAGTCTGAGATG
CGCGCTAAGGTTGGTTGGGCTTGGCTGGGGCGGGTGTTGCGAGCTCGCTT
TGGTGGAGGAGGTGACCGGTGGTTGTTGCTGTTGGGGAGTTTTTTCTGAA
GCCCATGGCCCGCGTTGGGAACAGTAGTGCACCCGAAATGTTGTTGATGT
TGTCGTTACGATGTTGTTTGTTTGTTGTTGTTGCTGGTGGTGGTGGTGTA
GGGGAGGCGGTACGTTTTGGCTGGGGCCCGACAAAAACAGCTCTGACGGC
GTATGCTACCCCCCAGCGCCCATGCTGTACCCCCTCTGTTACAATACAAA
CTTGTACTAATACACACCACACAACAATACATCATGATGCGCAACAATGC
CACGTCTCGTCAGGCTGCCGTGGCCGATAAGGCCGCCCTCCGGGAGGAGC
TGGTTGTCGCGGAGGAGCGTCAGGTGGAGCTGGAGGCCGAGGTCCGCGGC
CTGAAGGCAGCCGTGGTGGACGCCCAGACCAACGCCGAGCAGCTCGAGGA
GATGAGCAGGTGATGTGTAAAACCGGGGAGGTACCGATAGCCCCCGCGCT
CTTAGGAACTTGGCGGTAACGTTTGAGAATTTGGCAATCAAGTCTAGAAC
TTTATCCTCAACGTTTCATCTAACACAAGCGACTTGGGCACCATTTGTGA
GTCCAGTTAAGATCCTCTAGAGCCTGGTTTGTAGCGGTCATTTGTAGCCC
GCGAAAGGAACGCTTAGGCTGGACCTCTCCGGTCTGGACTAAATAGCGAT
TCTTTAAGGGCGGGCGTTGTCTGTACTGCCTTGGAAGGAGTGGCCTGTTT
GGATGATGATGCCGTGCCGCGGAAAGCGAAGATGACCCAGCCCTCTTTGA
CGGCCGTAGTTGTTGTTGGCTTCACAACAACAACAAAAGCGTGCCGATGT
TTCGGGTGTGCTGTATACTTTTGCTGATGACAATTGTATCGCTGATATCA
CAATACTTGCTACTCTCTGCTTTTGCTAGCGTGGAAGGTATCGCCGATAT
CGAAGTACCTGCCGCTCTTTGCTTGCCCGCATCGAACACGGATGATATCG
CAGTCTTACTGCCTCCTGCTTGTTGATGTCGAATGCGCCGGAAATATCGC
AATACTTGCTGCTCTCTGCTTTTGCTCATTTCGAACGTATCGCTGGCTTA
TGCTACTTGTACATGTATCACAATAACCCCAACCCCCTTACTAAATGATC
AGTCCTCTCGAGGACGGGTGGTCAACCGTGTAACCGCTAAGGCATGCAAA
ACATAAGAGTGCGCTCCCCACCCCCCTACTACTACTGCCCCTACTACTAA
AGGGCCCAAGGAGAGCTGGAGGTCCTGCGCCGGCGCCTGGAAGCTCTGTC
GAAGGATAAGGAGAACGTTGCCATGAGCGCGTCGGCTAAGGTGGAGGAGC
TCGAGGCCAAGGTCCTGGAGGGGGAGCTACAGAGGAGGAAGATGCACAAC
CTCATTCAGGTCGGTTCGTGTGTTCTTGTTGCTAGTAGCATCGACTGCGC
CTATGGGTGGATCGATGGAAAGACGTCGGTCTCGAAGTTTTGCTGCAAAA
GGCAAGTGCTGCGAAAGGTTAGCGTGATCTGGGACATTGAGTGTGTGTGT
GTGTGTGTTTCTTGGATTGGCATCTACCGCGCTAACCGGCTGATCGATGG
GACGACGTCAGTCTCCCAGTGCGATTGAAACAGAAAGTGTTGCTGAAGGC
CATGATCTGGGGGCCCACGCCTTACTTCCGCCCCCCTCCCCCAACCCAAA
CCCCCTCTTGTTGCAGGAACTCCGAGGAAATGTTCGCGTTTTCGCGCGAG
TGCGGCCGTTCCTGCCCTCAGATGGCGTCGGACCGGGAGAGGTGCCGGCC
GTCGTAGGCAAGGGCGACGGGGTTGGCTGCGTGCTGTCCAAGAGGCTCAT
CGGAGACAACGGCAAGGAGCTTCCGCCAGAGGCGCAGTCGTTTTCGTTCG
ACAAGTGCTTCCCGCCCAGGTGGGTTGTTCCCTCTTTGGTCTGTTTCTGG
AATGCCGTTTTTTGTCGGTGTGCGTTTTTTTTTTCGTGTGCCGGATCGTC
CCGCGAAAGAAGAAAAAGCGAGTGCAGCAGGCCAGGTCATGAGCAAGCAG
CGCCCTTTGGCGGATATTCGAAGTTCAGGAGATTGCGTCGGGGGCGTTGC
TGGTTTCGTCCGTGTGTGCGGTTTCGTTTTTTGGTGTGTGGCTTGCCCCG
CAACGAGAAAGCAGGCCAGATGGTAGTTCTTGAGGGGTAGGCACCCGTTG
GCATGTAGTATGAGAGACGATGGGGCTTGTACCCGTTGCGGAGGAATAAG
AAAAGCGTCGACAAGGGGTGTGATAATGAAGCGTAATGTAGGGTATATCT
CCCCACCCCCAGCCAAGGGATTTATACGTAGGCGTTAAGGGTGCGTCCTT
TCATCCCCAGAATTTGGACAAAAGTCACAGGCAAACGTGCACACAATGAC
TGCTTAGTAAAACGTGCCACCCAGTCAACCTGCATCCATCCTCTGTTCCT
GCGTCTGACGCTGCTGCTGGCGCTGCTGCTGATGTCGATTGTTGTTGTTG
TTGTTGTTGTCGTCGTCGTTTTCACAGCAACAATCGCTTCCAGTCTCCAC
TCAATACCTTGTAGTGCCCGTTTTGACTCGGGCACCTTCCGTCACAGGCC
AACTACAGTACCCCCACAAAGGGCACTCACTCCTAGCCGATGAAAGGGTA
CTCACTTCTAGCCCAAAAGGGTAATCACTTGTAGCCCCAAAAGGGTAATC
ACTTCATCAAATCGATGGATGATCTTTTTGGTGCCCGTTCCCCTTGTTCG
AGCAGCGCCGGGCAGGAGGAAGTGTTCACGGAAGTGTCGGAGTTCGTCCA
GTCAGCGCTCGACGGTTTCAACGTGTGCCTTTTTAGCTACGGCCAGACCG
GCTCGGGCAAGACGCACACCATGCAGGGCAGCGGCGCGGGCGACATGAGG
GGCATGATCCCCCGCGCCATGGAGCAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6114:1984..7960-

>mRNA_Ecto-sp13_S_contig6114.16796.1 ID=mRNA_Ecto-sp13_S_contig6114.16796.1|Name=mRNA_Ecto-sp13_S_contig6114.16796.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=963bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6114:1984..7960- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAGCTCGACGCTGTTCACCTTCGCCAAGTCTCAGATGGCGGCCAACGA
GCGGGAGTCCGAGCTGAAGGACGCACGGAGGGCGCTGGAAGAACGCCTTT
CCTCTCTAGAAGCAGAGAAGCTCATGAACGCCAGCAGAGAGTCCTCGGAG
TTCCGAGCGGAGCTTGTGGAGGCAAGGATGAAGGCTCAGCAGACGGCCGC
CGTACAGCAGCAGCACTCGAAGGAGATGGAGGCCGAGCGCGTCGCCAGGG
TCAAGCTCGAGACGGAGTCTGAGATGCGCGCTAAGGCTGCCGTGGCCGAT
AAGGCCGCCCTCCGGGAGGAGCTGGTTGTCGCGGAGGAGCGTCAGGTGGA
GCTGGAGGCCGAGGTCCGCGGCCTGAAGGCAGCCGTGGTGGACGCCCAGA
CCAACGCCGAGCAGCTCGAGGAGATGAGCAGGGCCCAAGGAGAGCTGGAG
GTCCTGCGCCGGCGCCTGGAAGCTCTGTCGAAGGATAAGGAGAACGTTGC
CATGAGCGCGTCGGCTAAGGTGGAGGAGCTCGAGGCCAAGGTCCTGGAGG
GGGAGCTACAGAGGAGGAAGATGCACAACCTCATTCAGGAACTCCGAGGA
AATGTTCGCGTTTTCGCGCGAGTGCGGCCGTTCCTGCCCTCAGATGGCGT
CGGACCGGGAGAGGTGCCGGCCGTCGTAGGCAAGGGCGACGGGGTTGGCT
GCGTGCTGTCCAAGAGGCTCATCGGAGACAACGGCAAGGAGCTTCCGCCA
GAGGCGCAGTCGTTTTCGTTCGACAAGTGCTTCCCGCCCAGCGCCGGGCA
GGAGGAAGTGTTCACGGAAGTGTCGGAGTTCGTCCAGTCAGCGCTCGACG
GTTTCAACGTGTGCCTTTTTAGCTACGGCCAGACCGGCTCGGGCAAGACG
CACACCATGCAGGGCAGCGGCGCGGGCGACATGAGGGGCATGATCCCCCG
CGCCATGGAGCAG
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