mRNA_Ecto-sp13_S_contig6111.16793.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: D8LDU2_ECTSI (DNA topoisomerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDU2_ECTSI) HSP 1 Score: 928 bits (2399), Expect = 0.000e+0 Identity = 504/531 (94.92%), Postives = 505/531 (95.10%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAKVVKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLPGLESLDDRCSILVGP 1593
FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAE AVRDSFGDEYVRKGDAK VKVKGSQEAHEAIRPALVGAT AA DT DGKQA EEE XXXX T GRFLHPTELPVEEDGG RGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGE EVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCE ARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASK ATIDP+EAKRARLPGLESLDDRCSILVGP
Sbjct: 261 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEGAVRDSFGDEYVRKGDAKTVKVKGSQEAHEAIRPALVGATPAATDTADGKQAREEEXXXXXXXXXXXXXTTGGRFLHPTELPVEEDGGGG----RGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGE-EVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEDARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKRATIDPLEAKRARLPGLESLDDRCSILVGP 786
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A6H5KCV2_9PHAE (TOP1Ac domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCV2_9PHAE) HSP 1 Score: 785 bits (2027), Expect = 1.580e-278 Identity = 441/482 (91.49%), Postives = 446/482 (92.53%), Query Frame = 1
Query: 151 TAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAKVVKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEG-RFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLPGLESLDDRCSILVGP 1593
TA G GRSFEARLVEVGSKTVVTGKDFDPDTGEIKD LDASKLELLGSEKASAVAASLSSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAA VAE AVRDSFG EYVRKGDAKVVKVKGSQEAHEAIRPALVGAT AA DT DGKQAGEE XXXX G RFLHPTELPVEE XXXX RGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGE EVVDVVLKASGKTTVF+GFLKAYR EGADESVPGGAAAEGDDQETELPLLVEGG+VVCE ARPAPHRTSPPRR+ SFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASK AT+DP+EAKRARLPGLESLDDRCSILVGP
Sbjct: 12 TACGGKGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDTLDASKLELLGSEKASAVAASLSSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAARVAEGAVRDSFGGEYVRKGDAKVVKVKGSQEAHEAIRPALVGATPAATDTHDGKQAGEEXXXXXXXXXXXXXXXXXGGRFLHPTELPVEEXXXXXXX--RGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGE-EVVDVVLKASGKTTVFDGFLKAYRVEGADESVPGGAAAEGDDQETELPLLVEGGEVVCEDARPAPHRTSPPRRYR--SFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKRATVDPLEAKRARLPGLESLDDRCSILVGP 488
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A5D3YIY6_9BACT (DNA topoisomerase 1 n=1 Tax=Fodinibius salinus TaxID=860790 RepID=A0A5D3YIY6_9BACT) HSP 1 Score: 345 bits (885), Expect = 6.850e-106 Identity = 226/534 (42.32%), Postives = 301/534 (56.37%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSSLE--VLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAKVVKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLP--GLESLDDRCSILVG 1590
+T++P++W +APGLSAGRVQSVA+ +VERER R+KF+SA YWD+ A + E FEA L + K + +GKDFD +TG++K K+ LL + AS + L+ E V +V K R +R P A FITSTLQQE++RKL +TM AQ LYE G+ITYMRTD LS +A A AV+D +G +Y+ K +QEAHEAIRPA F P E GL LYDL+++RT+A+ MA++E +FT V++ A D + +V + K SGK +F GF +AY E G+D+ P A A +QE LP L EG +V E P H T PP RF+EA+ +KELE +GVGRPSTYASII T++ R Y G++L P+ T F V +LL E+ D D+ FT++ME KLD IA GE + +YLSEYY GE GLKAKV + IDP +A++ LP GL ++ ILVG
Sbjct: 160 YTISPLLWKKIAPGLSAGRVQSVAVRFLVERERERMKFRSARYWDLKAKLHKLNESD-IFEADLTRLDGKRLASGKDFDENTGKLKKP---EKVVLLDDDSASELRDDLNGAEWEVSEVKKNRRKRNPSAAFITSTLQQEANRKLNFSAKRTMGVAQKLYENGHITYMRTDSARLSGQAINAARNAVKDEYGKKYLFDRPRNYGGQKAAQEAHEAIRPAG------------------------------------SYFKKPQEA--------------GLYGDQFKLYDLIWKRTIATQMAKAELEFTNVTIKA------DADGKVAE--FKTSGKEIIFPGFFRAYVE-GSDD--PNAALA---NQERFLPKLAEGEEVTEEGIEPTSHETQPPSRFTEATLVKELEKQGVGRPSTYASIISTIQNRGYAEADGKTLIPTFTAFAVTELLEENLHDVVDSDFTSQMEAKLDQIAHGELDTDQYLSEYYKGEKGLKAKVDEQEDEIDPDDARQLNLPLPGLNGIN----ILVG 621
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A521DC44_9BACT (DNA topoisomerase 1 n=1 Tax=Gracilimonas mengyeensis TaxID=1302730 RepID=A0A521DC44_9BACT) HSP 1 Score: 344 bits (883), Expect = 1.380e-105 Identity = 217/525 (41.33%), Postives = 303/525 (57.71%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASL--SSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAKVVKV-KGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLPGLESLD 1566
+T++P++W ++PGLSAGRVQSVA+ +VERER R+KFKSA Y+D+ A + AGE FEA L + K + +GKDFD +TG++K + LL +KAS + L +S V+ VD + +R P PFITST+QQE++RK TM AQ LYE G+ITYMRTD LS +A G A AV + +G++Y+ + K KG+QEAHEAIRPA RF+ P + GL + LYDL+++RT+A+ MAE+E +FT V++ A D +A GK +F G+ +AY E G+D+ AA E +QE LP + EG + H T PP RF+EA+ +KELE +GVGRPSTYASII T++ R Y +G++L P+ T F V+ LL +HFPD D+ FT+ +E+KLDA+A G ++ V+YL +YY GE+GLK+KV ++ IDP EAK LP L++LD
Sbjct: 160 YTVSPLLWKKISPGLSAGRVQSVAVEFLVERERERMKFKSATYYDLKAKLHKAGE-NDEFEADLTHLNEKRLASGKDFDENTGKLKKP---KSVVLLDEDKASDLVDDLKNASWSVINVDVKTQKRNPAPPFITSTIQQEANRKFGFSARDTMSVAQKLYEKGFITYMRTDSTRLSGQAIGAARDAVTEEYGEDYLFERVRNYNKKGKGAQEAHEAIRPAG------------------------------------SRFVKPEKA--------------GLSGREFKLYDLIWKRTIATQMAEAELEFTNVTIRA--------TNNGTDADFRAGGKKILFPGYFRAYVE-GSDDPE---AALE--NQENFLPAMNEGDSTELDDLNFVSHETKPPARFTEATLVKELEKRGVGRPSTYASIISTIQDRGYAKSEGKTLIPTFTAFAVSTLLEKHFPDLVDSDFTSSLENKLDAVAEGTQDPVKYLEDYYNGENGLKSKVDTQEDKIDPQEAKLLDLP-LDNLD 615
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A6P0TUZ9_9CYAN (DNA topoisomerase (Fragment) n=2 Tax=unclassified Okeania TaxID=2634635 RepID=A0A6P0TUZ9_9CYAN) HSP 1 Score: 338 bits (867), Expect = 1.750e-105 Identity = 223/526 (42.40%), Postives = 293/526 (55.70%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSSLE--VLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAK-VVKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLPGLESLDD 1569
+TL+PV+W +A GLSAGRVQSVA+ ++V RER R FK YWD+ A++ A +P FE++LV +G V TG DFD +TG+I + + LL +A A+ L + V V++R V+R+P PF TSTLQQES+RKLR+G QTMR AQ+LYE G+ITYMRTD LS EA A V +G EY+ + K KG+QEAHEAIRPA GK F P E GL Q ALYDL+++RT+A MA+S TV+L +V D +++GK F GFL+AY E G+D+ AA E DQE LP L +G + C+ H T PP RF+EAS +K LE++G+GRPSTYAS+IGT+ R Y LQ +L P+ T F V LL +HFP+F D FTA+ME LD I+ GE + + YL E+Y GE GL ++ + IDP K AR L++LDD
Sbjct: 160 YTLSPVLWKKIAWGLSAGRVQSVAVRLLVNRERQRRAFKQGGYWDLKASLEQAKKP---FESKLVTLGGTKVATGSDFDENTGKIAE---GRNVVLLDEAQAEALKERLQNKPWTVNSVEERAVKRKPSPPFTTSTLQQESNRKLRMGARQTMRTAQSLYEQGFITYMRTDSVHLSDEAIAAARSCVEKMYGPEYLSPQPRQYTTKSKGAQEAHEAIRPA-------------GKT-----------------------FRTPQET--------------GLNGQELALYDLIWKRTVACQMADSRQTHITVNL------------QVEDAGFRSNGKRIDFPGFLRAYVE-GSDDPE---AALE--DQEVPLPPLKQGDRPNCKDIEVVGHETQPPARFTEASLVKTLESEGIGRPSTYASVIGTIVDRGYAKLQSNALVPTFTAFGVTSLLEKHFPEFVDVKFTARMEQTLDDISTGEVQWLPYLREFYSGESGLDTQIKEQEEHIDP---KLARTIELDNLDD 608
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A2T1C480_9CYAN (DNA topoisomerase 1 n=1 Tax=Merismopedia glauca CCAP 1448/3 TaxID=1296344 RepID=A0A2T1C480_9CYAN) HSP 1 Score: 343 bits (881), Expect = 5.960e-105 Identity = 224/522 (42.91%), Postives = 287/522 (54.98%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSS--LEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVR-KGDAKVVKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLPGLE 1557
+TL+P++W +A GLSAGRVQSVA+ ++V RERARL FK YWD+ A + + F A+LV V + TG DFDPDTG+I + K+ LL E A A+ A L V +++R V R+P PF TSTLQQES+RKLRL +TMR AQ+LYE GYITYMRTD LS +A A V + +G EY+ K K KG+QEAHEAIRPA G++ F P E GL Q +LYDLV++RT+A MA+S +V L EV D +A+GK F G+L+AY E G+D+ AA E DQE LP L G CE PH T PP RF+EAS +K LE++G+GRPSTYASIIGT+ R Y +Q ++L P+ T F V LL +HFPD DT FTAKME LD I+ GE + + YL ++Y GE GL V + + ID +A+ L LE
Sbjct: 160 YTLSPLLWKKIARGLSAGRVQSVAVRVLVNRERARLAFKQGSYWDLQALLV---HKTQKFGAKLVTVAGVKIATGADFDPDTGQI---IAGKKVTLLNEEDAKALQARLIEEIWTVKDIEERAVNRKPSPPFTTSTLQQESNRKLRLSARETMRVAQSLYEQGYITYMRTDSVHLSDQAIEAARSCVMEKYGAEYLSPKPRQYTTKAKGAQEAHEAIRPA--GSS----------------------------------FRTPRET--------------GLNGQELSLYDLVWKRTVACQMADSRQTHISVDL------------EVADAGFRATGKRIDFPGYLRAYVE-GSDDP---NAAIE--DQEVILPPLKAGDHPECEKLEAIPHETQPPARFTEASLVKTLESEGIGRPSTYASIIGTIADRGYAKMQSQALVPTFTAFAVTTLLEKHFPDLVDTSFTAKMEQTLDDISTGEAQWLPYLKKFYSGETGLDTLVKQQESQIDRAQARTIELDHLE 607
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A345UGM9_9BACT (DNA topoisomerase 1 n=1 Tax=Candidatus Cyclonatronum proteinivorum TaxID=1457365 RepID=A0A345UGM9_9BACT) HSP 1 Score: 342 bits (878), Expect = 1.250e-104 Identity = 220/539 (40.82%), Postives = 302/539 (56.03%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASL---SSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAK-VVKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAG-------------GVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLPGLESLD 1566
+T++P++W +APGLSAGRVQSVA+ ++V+RER R++F+S Y D+ A + G+ +FEA + E+ K + +GKDFD +TG++K K DA +ELL E+A A+ L +S +VL+VD + +R P PF TSTLQQES+RK TMR AQ+LYE G+ITYMRTD LS +A A V +GDEY+ + + + K K +QEAHEAIRPA F P E GL+ + LYDL+++RT+A+ MAE+ FT V + G S DG E KASGK +F G+ +AY E G+D+ A+ +DQ+ LP L E ++ C+ H T PP RF+EA+ IK LE +GVGRPSTYASIIGT++ R Y +G +L PS T F V +LL HFPD DT FT++ME++LD IA G +R+ Y+ Y+ GE GLK V + + IDP A+R LP +E LD
Sbjct: 160 YTISPLLWKKIAPGLSAGRVQSVAVKLIVDRERERMRFRSGTYCDLKAVLNPEGKKS-TFEAEMSELNGKRLASGKDFDENTGKLK-KPDA--VELLNIEQAEALKEQLLSKASWQVLQVDTKEQKRSPAPPFTTSTLQQESNRKFGFSAGDTMRVAQSLYEQGFITYMRTDSTFLSNQAIAAARSGVSALYGDEYLSEKERRYATKSKAAQEAHEAIRPAG------------------------------------SHFRVPNET--------------GLDGRELKLYDLIWKRTVATQMAEARIAFTNVLISGQIPPAKDVLSGPLEGKSRPDGSLEAR---FKASGKKILFPGYFRAYVE-GSDDP-----EAQLEDQDKPLPALNEADELACKKLEAVTHETKPPARFTEATLIKFLEKEGVGRPSTYASIIGTIQDRKYAQKEGSALVPSFTAFAVTELLETHFPDVVDTHFTSEMENQLDEIAHGNYDRLSYIRSYFEGEKGLKENVEKQESQIDPALARRINLP-IEGLD 634
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A1J0AEK9_9CYAN (DNA topoisomerase 1 n=2 Tax=Cyanobacteria TaxID=1117 RepID=A0A1J0AEK9_9CYAN) HSP 1 Score: 342 bits (877), Expect = 1.820e-104 Identity = 220/534 (41.20%), Postives = 292/534 (54.68%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASL--SSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVR-KGDAKVVKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLPGLESLDDRCSILVGP 1593
+TL+P++W V PGLSAGRVQSVA+ ++V+RER R F++A+YWD+ A +TA P FE+RLV +G + TG+DFDP TGE+ L ++ +L +A + L S+ V ++ R+V+R+P PF TSTLQQE++RKLRL TMR AQ LYE GYITYMRTD LS++A A V+ +G Y+ K + KG+QEAHEAIRPA G + GR L ALYDL+++RT+A+ MAE+ TV++ AG + + SGK F GF +AY E G+D+ P A DDQE LP L G C H T PP R++EAS +K LE++GVGRPSTYASIIGT++ R Y +G +L P+ T F V LL ++FP DTGFTA+ME LD IA GE + YL E+YLGE GL ++V ++ ATI P A+ L GL S GP
Sbjct: 174 YTLSPLLWQKVGPGLSAGRVQSVAVRLLVQRERQRRAFRTAEYWDLKAQLTAHQTP---FESRLVALGGVKLATGQDFDPQTGEL---LPRRRVRVLDQTQAETLCQQLQGSTWRVQDLESRQVQRKPAPPFTTSTLQQEANRKLRLSTRDTMRIAQNLYEQGYITYMRTDSVHLSQQAITAARSCVQQMYGASYLSPKPRQYATQSKGAQEAHEAIRPA------------------------GSDFRTPQVTGLTGREL--------------------------ALYDLIWKRTVATQMAEARLTHLTVTIQAG------------EAEFRTSGKRIDFPGFFRAYVE-GSDD--PQAAL---DDQEISLPPLAVGDTPQCTRLEALRHETQPPDRYTEASLVKTLESEGVGRPSTYASIIGTIQDRGYAQTEGNALVPTFTAFAVTTLLEQNFPHLVDTGFTAQMEQTLDDIAGGEVPWLPYLQEFYLGEQGLASRVKTQAATISPTTARTLELEGLGEAKVHISTRYGP 633
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A6A8Q780_9BACT (DNA topoisomerase 1 n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q780_9BACT) HSP 1 Score: 341 bits (875), Expect = 2.010e-104 Identity = 218/528 (41.29%), Postives = 301/528 (57.01%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASLSSLE--VLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAKV-VKVKGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYRE--EGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLP--GLESL 1563
+T++P++W ++PGLSAGRVQSVA+ +V RER R+KFKSA Y+D+ A+++ G F A L + K + +GKDFD +TG++K K DA + LL EKAS + L + V KVD ++ +R P PFITSTLQQE++RK TM AQ LYE G+ITYMRTD LS +A G A A+ D +G++Y+ + K K +QEAHEAIRP S S RF+HP + GL + LYDL+++RT+++ MA++E +FT V++ A E D + SGK +F GF +AY E + DE++ ++QE LP L EG H T PP R++EA+ +KELE +GVGRPSTYASII T++ R Y G+ L P+ T F V+ LL HFPD D+ FT+ +EDKLDA+ARG+++ V+YL +YY GE+GLKAKV + I+P EAK LP GLE +
Sbjct: 160 YTVSPLLWKKISPGLSAGRVQSVAVEFLVVRERERMKFKSAIYYDLKADLSKTGT-SEEFNADLTHLDEKRLASGKDFDENTGKLK-KPDA--VVLLDEEKASKLVDDLKEADWSVSKVDVKKQKRNPAPPFITSTLQQEANRKFGFSARDTMSVAQKLYEKGFITYMRTDSTKLSGQAIGAARDAITDQYGEDYLFERVRNYGSKSKSAQEAHEAIRP------------------------------SGS------RFVHPEKT--------------GLRGREFKLYDLIWKRTISTQMAQAELEFTNVTIRA------TNEDTTAD--FRTSGKKILFPGFFRAYVEGSDNPDEAL--------ENQEKYLPPLNEGDSTELNNLDFVSHETKPPARYTEATLVKELEKRGVGRPSTYASIISTIQNRQYARSDGKRLIPTFTAFAVSSLLENHFPDLVDSDFTSSLEDKLDAVARGKQDPVKYLDDYYKGENGLKAKVDQQEDKINPQEAKLLDLPLDGLEGI 617
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Match: A0A2D8CJG1_9BACT (DNA topoisomerase 1 n=5 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D8CJG1_9BACT) HSP 1 Score: 341 bits (874), Expect = 2.880e-104 Identity = 217/526 (41.25%), Postives = 306/526 (58.17%), Query Frame = 1
Query: 1 FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVTAAGEPGRSFEARLVEVGSKTVVTGKDFDPDTGEIKDKLDASKLELLGSEKASAVAASL--SSLEVLKVDKRRVRRQPPAPFITSTLQQESSRKLRLGVDQTMRAAQALYEAGYITYMRTDRPSLSKEAAGVAEVAVRDSFGDEYVRKGDAKVVKV-KGSQEAHEAIRPALVGATLAAADTPDGKQAGEEEEEAGXXXXSASTNATEGRFLHPTELPVEEDGGXXXXXXRGLEEQHRALYDLVYRRTLASAMAESEADFTTVSLGAGGVSLGDGEQEVVDVVLKASGKTTVFEGFLKAYREEGADESVPGGAAAEGDDQETELPLLVEGGKVVCEAARPAPHRTSPPRRFSEASFIKELEAKGVGRPSTYASIIGTLRTRTYVNLQGRSLTPSLTGFVVADLLREHFPDFTDTGFTAKMEDKLDAIARGEKERVEYLSEYYLGEDGLKAKVASKTATIDPVEAKRARLP--GLESL 1563
+T++P++W ++PGLSAGRVQSVA+ +V+RER R+KFKSA Y+D+ A + G+ + F+A L + K + +GKDFD +TG++K K D + LL +KAS++ L +S V+ VD + +R P PFITSTLQQE++RK TM AQ LYE G+ITYMRTD LS +A A AV + +GDEY+ + K K +QEAHEAIRP S S RF+ P + GL ++ LYDL+++RT+++ MA++E +FT V++ A D +A+GK +F GF +AY E G+D+ AA E +QE LP + EG + H T PP RF+EA+ +KELE +GVGRPSTYASII T++ R Y G++L PS T F V+ LL +HFP+ D+ FT+++EDKLDA+A G ++ V+YL +YY GE+GLKAKV ++ IDP EAK LP G+E +
Sbjct: 160 YTVSPLLWKKISPGLSAGRVQSVAVEFLVQRERERMKFKSATYYDLKAQLHKEGDKDK-FDADLTHLNEKRLASGKDFDENTGKLK-KPD--NVVLLDEDKASSLVDDLKEASWSVINVDVKTQKRNPSPPFITSTLQQEANRKFGFSARDTMSVAQKLYEKGFITYMRTDSTRLSGQAISAARDAVTEEYGDEYLFERVRNYNKKGKSAQEAHEAIRP------------------------------SGS------RFVKPEKA--------------GLRDREFKLYDLIWKRTISTQMAQAELEFTNVTIRA--------TNNGTDADFRANGKKILFPGFFRAYVE-GSDDPE---AALE--NQEIYLPPMAEGDTTALDDLDFVSHETKPPARFTEATLVKELEKRGVGRPSTYASIISTIQNRGYAKSDGKTLIPSFTAFAVSSLLEKHFPNLVDSDFTSQLEDKLDAVASGTQDPVKYLEDYYNGENGLKAKVDTQEDKIDPQEAKLLDLPLEGMEGI 617 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6111.16793.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6111.16793.1 >prot_Ecto-sp13_S_contig6111.16793.1 ID=prot_Ecto-sp13_S_contig6111.16793.1|Name=mRNA_Ecto-sp13_S_contig6111.16793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=531bp FTLTPVIWNFVAPGLSAGRVQSVALAMVVERERARLKFKSADYWDVVANVback to top mRNA from alignment at Ecto-sp13_S_contig6111:3..6829- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6111.16793.1 ID=mRNA_Ecto-sp13_S_contig6111.16793.1|Name=mRNA_Ecto-sp13_S_contig6111.16793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6827bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6111:3..6829- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6111:3..6829- >mRNA_Ecto-sp13_S_contig6111.16793.1 ID=mRNA_Ecto-sp13_S_contig6111.16793.1|Name=mRNA_Ecto-sp13_S_contig6111.16793.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1593bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6111:3..6829- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |