mRNA_Ecto-sp13_S_contig611.16791.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: D8LPV9_ECTSI (NB-ARC and TPR repeat-containig protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPV9_ECTSI) HSP 1 Score: 508 bits (1309), Expect = 6.210e-149 Identity = 311/644 (48.29%), Postives = 392/644 (60.87%), Query Frame = 3
Query: 3204 QIRTFNSMLHVLLQSGSPDKFKSELQRLHVIYHEVEALHVKHTAGPEDPRRIRFGKKVNSGTQHKSIEEDLDAIDGEALQLFTAIAANSSIDNSKVIRQILQDLKLEGRRVSAGSKLLVAGGVFGAVFVVLAALALVHRDGEAPVDVLKAVELVLRDFGPDGLRVIDGTQLFVVGLFGTTVVPFGAVTTAQRNAVFSMIRGALPPTLPEQAAVPAAALVLPHSYVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVVSS*SRW*PRV--TTRLSVYQGDGWGWET*LKKRLWSCCRRRAWLWAGLEPTPGPK-RPRLLRAVDVCH---WVSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ 5117
++ ++ +L VLLQS D K+EL RL +Y E++ALHVKHTA P DP+ + KKVN GTQHKSIEEDLDAID EA QLF IA SSID K I+QIL+ L+ + G+ + +AGGVF A+ V AA+ L HR+ + +D+ + V LVL+D +G+R+ + + +V +FG +V AV AQR A +MIR LPPTLP++AAVP AL LP SYVER V EA L++P+ LAPY +VGMGGGGKTVLASA+VR S+ EHF GGIF + +GR SL LQ LARE+ APTD PHGVPH DSLEQV QHLAA S G+SPRLVVLDDVWEREVV++ +V TTR G G L W +G PG R ++ + VD C V A+ P KG+ E + G R + FL+M+V+A GAVAP E L NLWEIQDVEGT+EEA+GLV+KCLLQ V GYRVHDL+L +++ +K D + VK ATALQAQ L RL+VV YGD +HGAD GLF L TL +E+LSGD LE S RA L EL+SC +VAN W+ ++++ Q
Sbjct: 32 RLADYDGVLQVLLQSDFAD-IKNELLRLRGLYEEIDALHVKHTADPADPKWAKAAKKVNRGTQHKSIEEDLDAIDKEARQLFGIIATKSSIDTRKTIKQILE---LQRGPNTVGTPVAIAGGVFAALLVAFAAVILSHRNEISHIDMGEVVGLVLQDLQLEGVRITFASHVSIVAVFGALLVVSSAVIWAQRKAFSTMIRDVLPPTLPQRAAVPTGALALPRSYVERPGVQEAMGDLMDPEKALAPYMIVGMGGGGKTVLASALVRKSSVLEHFRGGIFWMEMGRGANKSLLHRLQGLAREMGAAPTDAPHGVPHVFDSLEQVMQHLAAVVSRGSSPRLVVLDDVWEREVVAAFLGVGLKVLVTTRDRSIVGVPGGLLE-LGDMAEDEALELLWKTSGTVGQPGDGVRTQMTKVVDRCGRLPLVLAIAGSMPVVKGKGLKDGAWEELIEEFENVTTIMWEPGEESRNLDMVLGASFNALAARKREEFLRMAVLAPGAVAPFEMLRNLWEIQDVEGTKEEAEGLVNKCLLQDVDGVGYRVHDLLLKYLRVKIKQDGERVKKATALQAQYLGRLDVVMSYGDQKHGADNQGLFGLGTLWRCLEKLSGDPVLETASYRAILGELDSCEATAEVANCLEWVALLYDIQ 670
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: A0A6H5KFQ0_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFQ0_9PHAE) HSP 1 Score: 457 bits (1177), Expect = 1.810e-140 Identity = 247/323 (76.47%), Postives = 259/323 (80.19%), Query Frame = 3
Query: 3204 QIRTFNSMLHVLLQSGSPDKFKSELQRLHVIYHEVEALHVKHTAGPEDPRRIRFGKKVNSGTQHKSIEEDLDAIDGEALQLFTAIAANSSIDNSKVIRQILQDLKLEGRRVSAGSKLLVAGGVFGAVFVVLAALALVHRDGEAPVDVLKAVELVLRDFGPDGLRVIDGTQLFVVGLFGTTVVPFGAVTTAQRNAVFSMIRGALPPTLPEQAAVPAAALVLPHSYVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQV 4172
+++ ++S LHVLLQSGSPDKFKSELQRLH IYHE+EALHVKHTA PEDP +RF KKVN GTQHKSIEEDLDAIDG+ALQL TAIAA SSI NSK IRQILQDLKLEGRRVS GS LLVAGGVFGAVFV +AALAL HRDGEAPVDV +AVELVLRDFGPDGLRV DGTQLFVVGL G VV FGAVTTAQRNAVFSMIR AADG INP+T LAP TVVGMGGGGKTVLASAIVRDPS+REHFLGGI VSVGRNGK SLPPLLQTLAREI APTD PHGVPHALD LEQV
Sbjct: 32 RLKDYDSTLHVLLQSGSPDKFKSELQRLHDIYHEIEALHVKHTADPEDPTWVRFAKKVNRGTQHKSIEEDLDAIDGQALQLITAIAAKSSIGNSKAIRQILQDLKLEGRRVSGGSTLLVAGGVFGAVFVEIAALALAHRDGEAPVDVFEAVELVLRDFGPDGLRVSDGTQLFVVGLIGALVVAFGAVTTAQRNAVFSMIR--------------------------------AADGPINPETALAPSTVVGMGGGGKTVLASAIVRDPSVREHFLGGISWVSVGRNGKRSLPPLLQTLAREITTAPTDAPHGVPHALDGLEQV 322
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: A0A6H5LJA6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJA6_9PHAE) HSP 1 Score: 377 bits (968), Expect = 4.860e-111 Identity = 225/439 (51.25%), Postives = 279/439 (63.55%), Query Frame = 3
Query: 3834 AAVPAAALVLPHSYVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVVSS*SRW*PRV--TTRLSVYQGDGWGWET*LKKRLWSCCRRRAWLWAGLEPT-----PGPK-RPRLLRAVDVCHW---VSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ 5117
AAVPA AL LP SYVER V E ADGLI P+ APY VVGMGGGGKT+L SA+VR ++REHF GG+F + VGR+ K+SL LLQ LARE++ APTDTPHGVPH L+SLEQVKQHLA AS GTSPRLVVLDDVWEREVV + +V TTR G G L A L L+ + PG + R ++ + V +C V A+ KG+ V E + + ++ + G + + LKM+V+AAGA+APIE L NLWEI+D EGTREEA+GLVSKCLLQ VG GYRVHDLVL+ +K +++A+ ++V+ ATALQAQ L R++V++ YGDP HGA GLF LD L +VE+LSGD +LEV S RASL ELESC DVA+SY W+G +FN Q
Sbjct: 2 AAVPAGALTLPQSYVERAAVQEVADGLIKPEEPRAPYAVVGMGGGGKTMLVSAVVRKSNVREHFRGGVFWMRVGRHAKNSLLSLLQGLAREMSAAPTDTPHGVPHVLESLEQVKQHLATVASAGTSPRLVVLDDVWEREVVDALLSLGLKVLVTTRDRSVVGVSGG-----LLELGDMTEEEA-LELLLKTSRTVGQPGHEVRTQMTKVVVLCGHLPLVLAIAGSMSVVKGKGLTAVAWEELIKEFENVAKKMRVRGEQSSSIKVVLGTSFDALAARKQEESLKMTVLAAGALAPIEMLRNLWEIEDAEGTREEAEGLVSKCLLQAVGGSGYRVHDLVLEFVKTSIRAEEEMVEKATALQAQYLGRVDVLKSYGDPEHGAGNQGLFFLDALWRSVEKLSGDPELEVASYRASLGELESCEATEDVASSYRWVGFLFNIQ 434
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: D7G722_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI) HSP 1 Score: 374 bits (959), Expect = 1.940e-102 Identity = 228/447 (51.01%), Postives = 276/447 (61.74%), Query Frame = 3
Query: 3810 LPPTLPEQAAVPAAALVLPHS-YVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVVSS*SRW*PRV--TTRLSVYQGDGWGWET*LKKRLWSCCRRRAW----LWAGLEPTPGPK-RPRLLRAVDVCHW---VSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ 5117
LPP+LP+ AAVP AL LP S YVER V E ADGL P+ + APYTVVGMGGGGK+VLASA VR PS+REHF GGIF V VGR KSSL LLQ LA ++ APTD PHGVPH LD LEQV+QHLAA ASTGTSPRLVVLDDVWEREVV + +V TTR G G + L A +G PG R ++ + V +C V A+ +G+ V E ++ ++ G + + + FLKM+V+AAGA+APIE L NLWE++D EGTR++A+GLVSKCLL VG GYRVHDLVL+ K +++A+ + VK ATALQAQ L RL+V+EGYGDP HGA GLF LD L +VE+LSGD +LEV S SL ELESC VA SY +G +FN Q
Sbjct: 252 LPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAG-----RLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQ 693
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: D7G720_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI) HSP 1 Score: 371 bits (953), Expect = 2.540e-100 Identity = 228/447 (51.01%), Postives = 276/447 (61.74%), Query Frame = 3
Query: 3810 LPPTLPEQAAVPAAALVLPHS-YVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVVSS*SRW*PRV--TTRLSVYQGDGWGWET*LKKRLWSCCRRRAW----LWAGLEPTPGPK-RPRLLRAVDVCHW---VSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ 5117
LPP+LP+ AAVPA AL LP S YVER V E ADGL P+ + APYTVVGMGGGGK+VLASA+VR PS+REHF GGIF V VGR KSSL LLQ LAR++ APTD P GVP LDSLEQV+QHLAA STGTS RLVVLDDVWEREVV + +V TTR G G + L A +G PG R ++ + V +C V A+ +G+ V E ++ ++ G + + + FLKM+V+AAGA+APIE L NLWEI+D EGTR++A+GLVSKCLL VG GYRVHDLVL+ K +++A+ + VK ATALQAQ L RL+V+E YGDP HG GLF LD L +VE+LSGD LEV S RASL+ELESC VA SY +G +FN Q
Sbjct: 235 LPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAG-----RLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEELESCEATEAVATSYGSVGFLFNIQ 676
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: D8LGG5_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI) HSP 1 Score: 375 bits (962), Expect = 2.910e-100 Identity = 224/451 (49.67%), Postives = 283/451 (62.75%), Query Frame = 3
Query: 3813 PPTLPEQAAVPAAALVLPHSYVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAA-ASTGTSPRLVVLDDVWEREVVSS*-----------SRW*PRVTTRLSVYQGDGWGWET*LKKRLWSCCRRRAWLWAGLEPTPGPK-RPRLLRAVDVCHW---VSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ 5117
PP L + AAVPA AL LP YVER V E ADGL P+ APYTVVG+GGGGK+VLASA+VR PS+REHF GGI V VGR K+SL PLLQ LARE+ VAPTD PH VP LDSLEQV+QHLAA ASTGTSPRLVVLDDVWEREVV + W V + GD ++ R+ + G PG R ++ + V +C V A+ + KG+ V E ++S+ ++ G + + + FL+MSV+AAGA+APIE L NLWEI+D EGTR+EA+GLV+KCLL VGD GYRVHD+VL+ K +++AD + V+ ATALQAQ L RL+V++ Y DP HGA GLF LD+L +VE+LSGD +LEV + RASL+ELESC D+A+SY+ +G +F+AQ
Sbjct: 211 PPRLLDMAAVPAGALDLPRGYVERAAVQEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDM------TEEEALELLRKTS----GTVGQPGDYVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKSFENVAKKMRARGQQSSAIKVVLETSFDSLAVQKQEEFLRMSVLAAGALAPIEMLRNLWEIEDAEGTRDEAEGLVNKCLLHAVGDGGYRVHDMVLEFAKTSIRADEETVEKATALQAQFLGRLDVLKSYRDPEHGAGDRGLFFLDSLWRSVEKLSGDPELEVTTYRASLRELESCKATEDMASSYSAVGFLFDAQ 651
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: D7FUD7_ECTSI (NB-ARC and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUD7_ECTSI) HSP 1 Score: 363 bits (933), Expect = 1.850e-98 Identity = 238/505 (47.13%), Postives = 291/505 (57.62%), Query Frame = 3
Query: 3648 KAVELVLRDFGPDGLRVIDGTQLFVVGLFGTTVVPFGAVTTAQRNAVFSMIRGALPPTLPEQAAVPAAALVLPHS-YVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVVSS*SRW*PR-----VTTRLSVYQGDGWGWET*LKKRLWSCCRRRAWLWAGLEPTPGPKRP------RLLRAVDVCHW---VSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ 5117
K +E L++ G D RV+D A+R +F+ I LPP+LP+ A VP AL LPHS YVER V E ADGL NP+ PYTVVG+GGGGK+VLASA+VR PS+REHF GGI V VGR K+SL PLLQ LARE+ APTD PHGVPHALDSLEQV+QHLAA AST SPRLVVLDDVWEREVV + + P +TTR D G + L A L T G P ++ + V +C V A+ + KG+ V E ++ + ++ G + ++ FL M+V+AAGA+APIE L NLWEI+D EGT EA+GLVSK LL VG GYR+HDLVLD K +++A+ + VK ATALQAQ L RL+VVE YGDP HGA G+F LD L +VE+LSGD QLEV S RASL LE A SY +G +FN Q
Sbjct: 7 KKLEKKLQEIGGDVCRVVDAIA-------------------AKR--IFTDI---LPPSLPDMAEVPVGALELPHSSYVERAAVQEVADGLTNPEEPRTPYTVVGIGGGGKSVLASAVVRMPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREVGAAPTDAPHGVPHALDSLEQVQQHLAAVASTRNSPRLVVLDDVWEREVVDA---FVPLGFKLLLTTRDRSIVCDPAG-----RLELGDMTEEEA--LELLRKTSGTVDPGDDVRMKMTKVVALCGHLPLVLAIAGSMSAVKGKGLTAVAWEELAKEFENVAKKMRARGQQSSSIKVVLETTFDSLATRKQKEFLMMAVLAAGALAPIEMLSNLWEIEDAEGTHAEAEGLVSKYLLHAVGGGGYRMHDLVLDFAKTSIRAEEETVKRATALQAQYLGRLDVVESYGDPEHGAGDQGIFFLDALWRSVEKLSGDPQLEVASYRASLGALEWGEATEAAARSYFSVGFLFNVQ 477
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: A0A6H5KXS7_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE) HSP 1 Score: 331 bits (848), Expect = 2.650e-93 Identity = 217/475 (45.68%), Postives = 268/475 (56.42%), Query Frame = 3
Query: 3810 LPPTLPEQAAVPAAALVLP-HSYVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVVSS*SRW*PRV--TTR---LSVYQGDGWGWET*LKKRLWSCCRRRAWLWAGLEPTPGPK-RPRLLRAVDVCHW---VSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAG-----------------------------AVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ 5117
LPP+LP+ AAVPA AL LP SYVER V E ADGL +P+ APYTVVGMGGGGK+VLASA+VR PS+REHF GGIF V VGR KSSL LLQ LARE+ A TD PH VPH LD LEQVKQHLAA ASTGT PRLVVLDDVWEREVV + +V TTR + V ++ R+ + G PG R ++ + V +C V A+ KG+ V + + + ++ G + + + + FLK++V+AA A+APIE L NLWEI+D EGTR+EA+GLVSKCLL VG GYRVHDLVL+ K ++AD ++V+ TALQA L RL+V++ Y DP HGA LF LD L +VE+LSGD +LEV LESC VA SY +G +FN Q
Sbjct: 198 LPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSS----GAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVKGKGLTAVAWKELAENLENVAKKMRARGEQSSSINAVLETSFDSLAVRKQEEFLKLAVLAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAPIEMLRNLWEIEDAEGTRDEAEGLVSKCLLHAVGGGGYRVHDLVLEYAKTRIRADAEMVRKVTALQAHFLGRLDVLKSYRDPEHGAGNQSLFFLDALWRSVEKLSGDPELEVA--------LESCEATEAVARSYWSVGFLFNIQ 660
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: A0A6H5KU94_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE) HSP 1 Score: 340 bits (873), Expect = 1.040e-92 Identity = 219/464 (47.20%), Postives = 277/464 (59.70%), Query Frame = 3
Query: 3810 LPPTLPEQAAVPAAALVLPHS-YVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVV------------SS*SRW*PRVTTRLSVYQGDGWGWET*LKKRLWSCCRRRAWLWAGLEPTPGPK-RPRLLRAVDVCH---WVSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQ---HGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVFNAQ-VQEVLFG 5138
LPP+LP+ A VPA A+ L S YVER V + ADG+ NP+ APYTV GMGGGGK+VLASA+VR S+REHF GGIF ++VGR K L PLLQ L ++ APTDTPHGVPH LDSLEQV++HL A ASTGTSPRLVVLDDVWEREVV ++ R V TR + GD E L+ L + +G PG R + + V +C V A+ P KG+ + +W + +S S+ + T +++F K +V+A GAVA E LLNLWE +D GTRE+A+GLVSKCLLQ VG GYRVHDLVLD +K+ +KAD ++ K ALQAQ L RL V++ Y P HGA GLF+LD L +VE+LSGD +LEV S SL LESC VA+SY+ +G +F+ Q +QE + G
Sbjct: 129 LPPSLPDMAKVPAEAVALSDSLYVERAAVRKVADGITNPEEPRAPYTVFGMGGGGKSVLASAVVRKSSVREHFRGGIFWLTVGRGAKKRLLPLLQGLTGDMGAAPTDTPHGVPHVLDSLEQVQRHLGAVASTGTSPRLVVLDDVWEREVVDALLPLGFKVLVTTRDRSVVGVPTRC-LELGDMTEEEA-LELLLKT---------SGTVGRPGDSVRTVMTKVVTLCGRLPLVLAIAGSLPVVKGKG---LTAGAWGKLIDELENVVTKMEASLEDSNSLNVVLETSFDALTFRKKQAFKKTAVLAPGAVASTEMLLNLWETEDTGGTREDAEGLVSKCLLQDVGGGGYRVHDLVLDFVKIKIKADMEMAKKIAALQAQFLGRLNVLKSYEHPEHGAGNQGLFVLDALWRSVEQLSGDPKLEVPSYSTSLAALESCEATTVVASSYSSVGFLFSIQAIQEQILG 578
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Match: A0A6H5KQU6_9PHAE (NB-ARC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQU6_9PHAE) HSP 1 Score: 185 bits (470), Expect = 3.490e-44 Identity = 159/451 (35.25%), Postives = 213/451 (47.23%), Query Frame = 3
Query: 3819 TLPEQAAVPAAALVLPHSYVERRCV*EAADGLINPQTTLAPYTVVGMGGGGKTVLASAIVRDPSMREHFLGGIFRVSVGRNGKSSLPPLLQTLAREIAVAPTDTPHGVPHALDSLEQVKQHLAAAASTGTSPRLVVLDDVWEREVVSS*SRW*PRV--TTRLSVYQG--------DGWGWET*LKKRLWSCCRRRAWLWAGLEPTPGPKRP-----------RLLRAVDVCHWVSALRAPCPS*KGRA*PPVPGESWSRSWRTWPRRCGLAGSSRRLSSWYSKPASTPCQHGSERSFLKMSVMAAGAVAPIEKLLNLWEIQDVEGTREEADGLVSKCLLQRVGDDGYRVHDLVLDAMKLNVKADTDIVKNATALQAQNLSRLEVVEGYGDPRHGADKNGLFILDTL*CAVEELSGDHQLEVDSNRASLKELESCVEAMDVANSYAWIGVVF 5108
+L +AAVPA A LPH YV R V +A +GLIN + AP+ VVGM G GKTVL SA+VR +REHF GGIF + VGR K+SL PL+QTLARE+ HGVP+ LD LEQV QH+AA ASTGTSPRLVVLDDVWEREVV + R +V TTR G + + ++ L + + L ++ RP ++ A W ++ + E+ +R R R L + L S + A + + M V+A ++AP E L NLWE+Q E++ +C G + K +T L+ H A GL +LD L +VE+L GD L+V S RASL+ELES + ANSY+ +G +F
Sbjct: 89 SLSNRAAVPAGAHGLPHYYVARSVVRKAVEGLINAEEPSAPFVVVGMSGAGKTVLVSAVVRHLRVREHFHGGIFWMRVGRGAKTSLLPLMQTLAREMGA------HGVPYVLDGLEQVGQHVAAVASTGTSPRLVVLDDVWEREVVDALLRLKLKVLVTTRDHSVVGVPGTRLEPEDMAEDEAMELLLKTSVPKNKALEKLIKAAMTVGRPANFLAQMTKVREIMTAAAAAAWDEMVK-------------LLNENMARFLRL--RGDQLPSLNVVLESSFDALAIRK-----QEEPIMMVVIAPRSIAPREMLENLWELQAGHWGCEKSS---RRCSHNTFGGWTWS--------------------KVSTTLE-----------------HVAGNQGLLVLDALWRSVEKLCGDLGLQVSSYRASLQELESREPTANTANSYSLVGALF 473 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig611.16791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig611.16791.1 >prot_Ecto-sp13_S_contig611.16791.1 ID=prot_Ecto-sp13_S_contig611.16791.1|Name=mRNA_Ecto-sp13_S_contig611.16791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=224bp MLHVLLQSGSPDKFKSELQRLHVIYHEVEALHVKHTAGPEDPRRIRFGKKback to top mRNA from alignment at Ecto-sp13_S_contig611:1249..15633+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig611.16791.1 ID=mRNA_Ecto-sp13_S_contig611.16791.1|Name=mRNA_Ecto-sp13_S_contig611.16791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=14385bp|location=Sequence derived from alignment at Ecto-sp13_S_contig611:1249..15633+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig611:1249..15633+ >mRNA_Ecto-sp13_S_contig611.16791.1 ID=mRNA_Ecto-sp13_S_contig611.16791.1|Name=mRNA_Ecto-sp13_S_contig611.16791.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=672bp|location=Sequence derived from alignment at Ecto-sp13_S_contig611:1249..15633+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |