prot_Ecto-sp13_S_contig6109.16789.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6109.16789.1
Unique Nameprot_Ecto-sp13_S_contig6109.16789.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length299
Homology
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: D7FL48_ECTSI (Leucine rich repeat carbohydrate binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL48_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 2.030e-135
Identity = 215/268 (80.22%), Postives = 225/268 (83.96%), Query Frame = 0
Query:    1 MLVDDGDDGSEVDVVEVGELGTVTA--DLDDGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTS--ESVDMSGATGQAVTNIGAELSDSEWLSIVETEIMVYNGVAPPPSLTTPATPSPTLPPSTEKNICGTQFADWSTCPIVPIALMATDLNNCNFVDADDADIPACLETFGKANVQFVYIPFHDDLTTLPVGVFLGLDNILDMDISYTGLQ 264
            +LVDDGDDGSEVDVVE GELGTVTA  DL D RLG+TVGC+PEGCTAALTRDGDM E   WSC PELG LCSISYDLGAEYSIDE QLA  QGDTRVRTV VAVDGDLVTTWTSSGTTS  ESVDMSGATGQ VT  GAELSDSEWLSIVETEIMVYNGVAPPPS TTPATPSPTLPP+T+ N+C    +D   C           LNNCNFVDAD ADIPACLE FGKA++QFVY+PFHDDLTTLPVGVF GLDNILDMDISYTGLQ
Sbjct:  166 ILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTVGCDPEGCTAALTRDGDMSEDSRWSCAPELGGLCSISYDLGAEYSIDELQLAMYQGDTRVRTVGVAVDGDLVTTWTSSGTTSGFESVDMSGATGQVVTITGAELSDSEWLSIVETEIMVYNGVAPPPSPTTPATPSPTLPPTTDLNVCFDSTSDDYRCLPSEDDPNTVYLNNCNFVDADGADIPACLEIFGKADIQFVYMPFHDDLTTLPVGVFSGLDNILDMDISYTGLQ 433          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: A0A6H5L1V3_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L1V3_9PHAE)

HSP 1 Score: 299 bits (766), Expect = 1.460e-94
Identity = 167/276 (60.51%), Postives = 202/276 (73.19%), Query Frame = 0
Query:    3 VDDG--DDGSEV--DVVEVGELGTVTA--DLDDGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTSE--SVDMSGATGQAVTNIGAELSDSEWLSIVETEIMVYNGVAPPPSLTTPA------TPSPTLPPSTEKNICGTQFADWSTCPIVPIALMATDLNNCNFVDADDADIPACLETFGKANVQFVYIPFHDDLTTLPVGVFLGLDNILDMDISYTGLQ 264
            VDDG  DD + V  DVVE  E+GTVTA  DL D RLG+TVGC+PEGCTAALTRDGDM EG  WSC P+LG  CSISYDLGAEY++++ +L   +GD+R RTVDV+VDG LVTTWTSSGTT+E  SVD+SGA GQ VT  G+  +DS+WLSI+ETEIMVY G AP PS TTP       TPSP + P+   N C     D   C          DLNNCNFVD+D AD+PAC E+FGK +++ +++ FHDDLTTLP GVF GL+N++DMD+SYTGL+
Sbjct:  167 VDDGIVDDDTVVVLDVVEAAEMGTVTATADLYDTRLGDTVGCDPEGCTAALTRDGDMSEGSRWSCAPKLGGPCSISYDLGAEYNVEQLRLRMYRGDSRTRTVDVSVDGALVTTWTSSGTTTEFESVDLSGAYGQVVTISGSNQADSQWLSIIETEIMVYEGDAPAPSPTTPPPVVMPMTPSP-VSPTAGINPCFDSTNDDYRCQPSVDQPAYIDLNNCNFVDSDAADLPACFESFGKTDIETLHLTFHDDLTTLPAGVFEGLENVVDMDMSYTGLE 441          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: A0A6H5KL74_9PHAE (F5/8 type C domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL74_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 3.340e-45
Identity = 106/177 (59.89%), Postives = 123/177 (69.49%), Query Frame = 0
Query:    1 MLVDDG----DDGSEVDVVEVGELGTVTAD--LDDGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTS--ESVDMSGATGQAVTNIGAELSDSEWLSIVETEIMVYNG--VAPP-PSLTTPA 166
            +LVDDG    DD +    VE G LG VTA   L D RLG++ GC+P GCTA LTRDGD+ +G  WSC P LG  CSISYDLGA Y + E +LA  +G TRVRTVDV VDG L TTWTSSGTT   E+VD+SG +GQ VT  G  L DSEW+SI ET+IMV +   V+PP PS TTPA
Sbjct:  168 ILVDDGVTDTDDVAGTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDGSRWSCAPSLGGTCSISYDLGAVYDLSELRLALYKGTTRVRTVDVTVDGSLATTWTSSGTTDGFENVDLSGYSGQDVTVTGV-LDDSEWVSITETDIMVLSDSVVSPPSPSTTTPA 343          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: A0A6H5KFA6_9PHAE (F5/8 type C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KFA6_9PHAE)

HSP 1 Score: 167 bits (422), Expect = 8.420e-43
Identity = 103/183 (56.28%), Postives = 124/183 (67.76%), Query Frame = 0
Query:    1 MLVDDG----DDGSEVDVVEVGELGTVTAD--LDDGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTS--ESVDMSGATGQAVTNIGAELSDSEWLSIVETEIMVYN-GVAPPPSLTTPATPSPTLPP 174
            +LVDDG    DD  +   VE G LG VTA   L D RLG++ GC+P GCTA LTRDGD+ +   WSC P LG  CSISYDLGA Y + + +LA   G TRVRTVDV+VDG L TTWTSSGTT   E++D+SG +GQ +T  G  L + EWLSI ETEIMV + GV  PPS ++P TP+P   P
Sbjct:  166 ILVDDGVTDTDDVVDTTEVEAGSLGIVTATSALFDPRLGDSNGCDPAGCTAELTRDGDVSDESRWSCAPSLGGTCSISYDLGAVYDLSKLRLALYNGATRVRTVDVSVDGSLATTWTSSGTTDGFENIDLSGYSGQDITVTGV-LDNLEWLSIKETEIMVLSDGVVFPPSASSP-TPAPVFAP 346          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: D7G5L7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5L7_ECTSI)

HSP 1 Score: 140 bits (353), Expect = 6.110e-38
Identity = 70/88 (79.55%), Postives = 74/88 (84.09%), Query Frame = 0
Query:    1 MLVDDGDDGSEVDVVEVGELGTVTA--DLDDGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQL 86
            +LVDDGDDGSEVDVVE GELGTVTA  DL D RLG+TVGC+P+GCTAALTRDGDM E   WSC PELG LCSISYD GAEY IDE QL
Sbjct:   28 ILVDDGDDGSEVDVVEAGELGTVTATADLYDDRLGDTVGCDPDGCTAALTRDGDMSEDSRWSCAPELGGLCSISYDRGAEYRIDELQL 115          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: D7FZZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZZ4_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.220e-35
Identity = 86/153 (56.21%), Postives = 100/153 (65.36%), Query Frame = 0
Query:   22 TVTADLDDGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELG---SLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTS--ESVDMSGATGQAVTNIGAELSDSEWLSIVETEIMVY--NGVAPPPSLTTPAT 167
            T TADL D  L    GC+P GCTAALTRDGD  +   WSC   LG   ++CSISYDLG E+ +DE ++A   GD RVRT+DV+VDG LV TWTSSGTT   ES+         V N+   L DSEWLSI+ETEIMV+  N V PPP   TPAT
Sbjct:  252 TTTADLFDPALAIDNGCDPAGCTAALTRDGDTGDASRWSCATNLGGEGAVCSISYDLGREFGLDELRVALYNGDIRVRTIDVSVDGVLVATWTSSGTTDGFESIAFPDGVSGTVINLQGVLDDSEWLSIIETEIMVWPQNVVTPPP---TPAT 401          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: D7FTH1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH1_ECTSI)

HSP 1 Score: 140 bits (352), Expect = 1.710e-33
Identity = 87/173 (50.29%), Postives = 107/173 (61.85%), Query Frame = 0
Query:    1 MLVDDGDDGSEVD-------VVEVGELGTVT--ADLDDGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTS--ESVDMSGATGQAVTNIGAELSDSEWLSIVETEIMVY-NGVAPPPS 161
            ++V+DGD GS  D        VE   LG+VT  A L D  L    GC+P GC A  TRDGD+     WSC P+LG  CSISYDLG  Y +DE +LA  +G  R  T++V VD  LV TWTSSGTT   E++DMSG +GQ V  I   L DSEWLSI+E EIM+  +G +P P+
Sbjct:  336 IMVEDGDQGSGDDDTTTNTSAVEASTLGSVTVGASLYDPSLAVDGGCDPSGCVADNTRDGDLSAASRWSCAPKLGGECSISYDLGTAYDLDEVRLAMFKGTERQVTMEVRVDDALVITWTSSGTTDGFEAIDMSGTSGQ-VLEITGVLDDSEWLSIIEAEIMLLEDGASPTPT 507          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: A0A6H5KH45_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KH45_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 4.690e-32
Identity = 84/173 (48.55%), Postives = 105/173 (60.69%), Query Frame = 0
Query:    1 MLVDDGDDGSEVDV-------VEVGELGTVTADLD--DGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTS--ESVDMSGATGQAVTNIGAELSDSEWLSIVETEIMVY-NGVAPPPS 161
            +++DDG+ GS+ D        VE   LG+VTA     D RL    GC+P GC    TRDGD+     WSC P LG  C+ISYDLG  Y +DE +LA  +G  R  ++ V VD  LVTTWTSSGTT   E++D+SG  GQ V  I   L DSEWLSI+E EIMV  +G +P P+
Sbjct:  149 IMIDDGETGSDDDNTTTNASGVEASTLGSVTAGASFYDPRLAVDGGCDPSGCVVDNTRDGDLSTASRWSCAPTLGGECTISYDLGTAYDLDELRLAMFKGTERQVSMKVRVDDALVTTWTSSGTTDGFEAIDLSGTWGQ-VLEITGVLDDSEWLSIIEAEIMVLEDGASPMPT 320          
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Match: D7G277_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G277_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 2.210e-14
Identity = 59/154 (38.31%), Postives = 85/154 (55.19%), Query Frame = 0
Query:   15 VEVGELGTVTADLD--DGRLGNTVGCNPEGCTAALTRDGDMFEGPIWSCTPEL--------GSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDVAVDGDLVTTWTSSGTTS--ESVDMSGATGQ-AVTNIGAE---LSDSEWLSIVETEIMV 152
            VE GE+ TVT   +  D R  +  GC P+GCT   TRDGD+ +   WSC+  L        G  C + ++LG    +    +A  +GDTR RT+++ V+G+L    TS GTTS  E+ ++ G  G   V ++G E   L+  E+LSI+E EI V
Sbjct:  248 VEAGEVTTVTVTTNAFDARTDDD-GCAPDGCTGENTRDGDLTDNSRWSCSAGLVEAAGGAAGEECQVMFELGEAQLVTSVSVAFLKGDTRTRTLNINVNGELFEVVTSGGTTSGLETFELDGGAGAPGVLSLGMESSGLTADEFLSIIEVEIAV 400          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6109.16789.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FL48_ECTSI2.030e-13580.22Leucine rich repeat carbohydrate binding protein n... [more]
A0A6H5L1V3_9PHAE1.460e-9460.51F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
A0A6H5KL74_9PHAE3.340e-4559.89F5/8 type C domain-containing protein n=3 Tax=Ecto... [more]
A0A6H5KFA6_9PHAE8.420e-4356.28F5/8 type C domain-containing protein n=2 Tax=Ecto... [more]
D7G5L7_ECTSI6.110e-3879.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FZZ4_ECTSI1.220e-3556.21Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTH1_ECTSI1.710e-3350.29Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KH45_9PHAE4.690e-3248.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G277_ECTSI2.210e-1438.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 177..281
e-value: 9.2E-6
score: 26.8
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 36..154
e-value: 3.7E-6
score: 28.9
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 202..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6109contigEcto-sp13_S_contig6109:2288..6224 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6109.16789.1mRNA_Ecto-sp13_S_contig6109.16789.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6109 22..7438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6109.16789.1 ID=prot_Ecto-sp13_S_contig6109.16789.1|Name=mRNA_Ecto-sp13_S_contig6109.16789.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=299bp
MLVDDGDDGSEVDVVEVGELGTVTADLDDGRLGNTVGCNPEGCTAALTRD
GDMFEGPIWSCTPELGSLCSISYDLGAEYSIDEFQLAQDQGDTRVRTVDV
AVDGDLVTTWTSSGTTSESVDMSGATGQAVTNIGAELSDSEWLSIVETEI
MVYNGVAPPPSLTTPATPSPTLPPSTEKNICGTQFADWSTCPIVPIALMA
TDLNNCNFVDADDADIPACLETFGKANVQFVYIPFHDDLTTLPVGVFLGL
DNILDMDISYTGLQTLPAGVFDGLSSLTKLVKFTGAAWRLCPKASSKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008979Galactose-bd-like_sf