mRNA_Ecto-sp13_S_contig61074.16787.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A6H5JZJ2_9PHAE (S5A_REDUCTASE domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZJ2_9PHAE) HSP 1 Score: 73.9 bits (180), Expect = 1.650e-14 Identity = 30/33 (90.91%), Postives = 31/33 (93.94%), Query Frame = 1
Query: 1 SGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
+GLYRFSRHPNY GEAVFWTGAWLAAIPAY KW
Sbjct: 289 TGLYRFSRHPNYLGEAVFWTGAWLAAIPAYTKW 321
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: UPI000A1753CB (DUF1295 domain-containing protein n=1 Tax=Derxia lacustris TaxID=764842 RepID=UPI000A1753CB) HSP 1 Score: 54.3 bits (129), Expect = 1.280e-7 Identity = 21/33 (63.64%), Postives = 24/33 (72.73%), Query Frame = 1
Query: 1 SGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
SGL+RFSRHPNYFGE + W G WL A+ A W
Sbjct: 172 SGLWRFSRHPNYFGECLLWWGLWLVALAAGGAW 204
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A2N5WZL4_9GAMM (DUF1295 domain-containing protein n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5WZL4_9GAMM) HSP 1 Score: 53.9 bits (128), Expect = 1.940e-7 Identity = 22/33 (66.67%), Postives = 25/33 (75.76%), Query Frame = 1
Query: 1 SGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
SGL+RFSRHPNYFGE V W+G L A+PA W
Sbjct: 195 SGLWRFSRHPNYFGEIVLWSGVALLALPALQGW 227
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A1M7F5N2_9BURK (Steroid 5-alpha reductase family enzyme n=1 Tax=Rhizobacter sp. OV335 TaxID=1500264 RepID=A0A1M7F5N2_9BURK) HSP 1 Score: 53.5 bits (127), Expect = 2.460e-7 Identity = 21/32 (65.62%), Postives = 23/32 (71.88%), Query Frame = 1
Query: 4 GLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
GL+R SRHPNYFGEA W G WL A+PA W
Sbjct: 178 GLWRLSRHPNYFGEACAWWGLWLMAVPAGGAW 209
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A5C7XKM5_LYSSP (DUF1295 domain-containing protein n=1 Tax=Lysobacter sp. TaxID=72226 RepID=A0A5C7XKM5_LYSSP) HSP 1 Score: 53.5 bits (127), Expect = 2.470e-7 Identity = 20/32 (62.50%), Postives = 24/32 (75.00%), Query Frame = 1
Query: 4 GLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
GL+R+SRHPNYFGEAVFW G W A++ W
Sbjct: 179 GLWRYSRHPNYFGEAVFWWGMWTASVSMGGAW 210
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A0Q6LTS4_9BURK (S5A_REDUCTASE domain-containing protein n=1 Tax=Rhizobacter sp. Root29 TaxID=1736511 RepID=A0A0Q6LTS4_9BURK) HSP 1 Score: 53.5 bits (127), Expect = 2.540e-7 Identity = 21/32 (65.62%), Postives = 23/32 (71.88%), Query Frame = 1
Query: 4 GLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
GL+R SRHPNYFGEA W G WL A+PA W
Sbjct: 185 GLWRLSRHPNYFGEACAWWGLWLMAVPAGGAW 216
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: UPI00168777E7 (DUF1295 domain-containing protein n=1 Tax=Spongiibacter pelagi TaxID=2760804 RepID=UPI00168777E7) HSP 1 Score: 53.5 bits (127), Expect = 2.550e-7 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 4 GLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
GL+RFSRHPNYFGE+V W G +LAAIP+ W
Sbjct: 178 GLWRFSRHPNYFGESVIWWGLFLAAIPSGQWW 209
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A831PF17_9BACT (DUF1295 domain-containing protein n=1 Tax=Candidatus Aminicenantes bacterium TaxID=2052149 RepID=A0A831PF17_9BACT) HSP 1 Score: 53.1 bits (126), Expect = 3.390e-7 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 1
Query: 1 SGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
SGL+++SRHPNYFGE + W G WL A+P + W
Sbjct: 168 SGLWKYSRHPNYFGEMLVWWGIWLTALPRLSGW 200
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A6N8Y981_9ACTN (DUF1295 domain-containing protein n=9 Tax=Bacteria TaxID=2 RepID=A0A6N8Y981_9ACTN) HSP 1 Score: 52.8 bits (125), Expect = 4.710e-7 Identity = 20/32 (62.50%), Postives = 25/32 (78.12%), Query Frame = 1
Query: 4 GLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
GL+R+SRHPNYFG++V W G WL A+ A A W
Sbjct: 176 GLWRYSRHPNYFGDSVVWWGIWLVAVAAGAWW 207
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Match: A0A7W0NJQ8_9ACTN (DUF1295 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0NJQ8_9ACTN) HSP 1 Score: 52.4 bits (124), Expect = 5.890e-7 Identity = 19/33 (57.58%), Postives = 25/33 (75.76%), Query Frame = 1
Query: 1 SGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW 99
+GL+R++RHPNYFG+A W G WL A+ A A W
Sbjct: 157 TGLWRYTRHPNYFGDATVWWGLWLVAVAAGAPW 189 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61074.16787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig61074.16787.1 >prot_Ecto-sp13_S_contig61074.16787.1 ID=prot_Ecto-sp13_S_contig61074.16787.1|Name=mRNA_Ecto-sp13_S_contig61074.16787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=34bp SGLYRFSRHPNYFGEAVFWTGAWLAAIPAYAKW*back to top mRNA from alignment at Ecto-sp13_S_contig61074:702..803+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig61074.16787.1 ID=mRNA_Ecto-sp13_S_contig61074.16787.1|Name=mRNA_Ecto-sp13_S_contig61074.16787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=102bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61074:702..803+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig61074:702..803+ >mRNA_Ecto-sp13_S_contig61074.16787.1 ID=mRNA_Ecto-sp13_S_contig61074.16787.1|Name=mRNA_Ecto-sp13_S_contig61074.16787.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=102bp|location=Sequence derived from alignment at Ecto-sp13_S_contig61074:702..803+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |