prot_Ecto-sp13_S_contig11966.1678.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig11966.1678.1
Unique Nameprot_Ecto-sp13_S_contig11966.1678.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length562
Homology
BLAST of mRNA_Ecto-sp13_S_contig11966.1678.1 vs. uniprot
Match: A0A6H5L011_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L011_9PHAE)

HSP 1 Score: 465 bits (1196), Expect = 9.620e-143
Identity = 410/566 (72.44%), Postives = 424/566 (74.91%), Query Frame = 0
Query:    1 MSFLLNYLDGALDTVTGRYDGDEGDETSNDEGSTVGAMDGDNNTEGLRDEAPSSATPASAATGTDINALEGSSSGPAAAIPPHAPARSASLSARRGLMESKVREALVLDGHRRGKRPPAQQEDDADAGPSSKTSLVPQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRLEAEAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQAEERXXXXXXXXXXXXXXXXXXXXXALVLERDC----QRNEERRVVSXXXXXXXXXXXXXXXXXXXXXXXVRTRWMRARQEAEARDNKRRLAARREEEVRGRPLPDVADAKAEXXXXXXXXXXXXXGGGGSVASRESPLGAAKVQLATESETPFRDADTAGLPAPSPTMPQDAVATVVPAAVNTSSSSRSRAREEAWAAARTLAEQKARSQAVRDAAWRASAQAERGAAGANLTDTGXXXXXXXAGFSEEPVAXXXXXXXXXXXXPEPNNSSNPGNVTLDTPVAESGLRANATPPSVAVPAALGVSSGGWRGLFSGRRQEGGGEASATSSVSGSQVSTVVATEPA 562
            MSFLLNYLDGALDTVTGRYDG EGDETSNDEGSTVGA+DGDNN  G+RDEAPSSATPAS A+GTDINAL G  SGPAAA+PPHAPAR ASLSAR+GLMESKV EALVLD H RGKRP AQQ+DDADA PSSKTSLV QAG                        X                TLRLEAEAV XXXXXXXXXXXXXXXXXXXXXXXXXXX       XXXXXXXXXXXXXXXXXXXXX            QRNEERR+   XXXXXXXXXXXXXXXXXXXXXX   RWMRAR                  EVRGRPLPDVADAK E              GGGSVASRESP GAAKV+LAT+ ETPFRDADTAGLPAPSPTM QDA                SRAREEAWAAARTLAEQKA+SQA+RDAA RASAQAERGAAGANLTD+GXXXXXXX GFSEEPVAXXXXXXXXXXXXPEPNNSSNP NVTLDTPVAESG R +AT P VAVPAAL VSSGGWRG F+GRRQE GGEASATSSVSGSQVSTVVATEPA
Sbjct:    1 MSFLLNYLDGALDTVTGRYDGYEGDETSNDEGSTVGAVDGDNNM-GVRDEAPSSATPASTASGTDINALGGRGSGPAAAVPPHAPARPASLSARQGLMESKVSEALVLDQHHRGKRPLAQQQDDADAVPSSKTSLVQQAGGDAEATRQRKGKEDEGLLHAAEEEXQKSGREDERPQREE--TLRLEAEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNEERRIAEAXXXXXXXXXXXXXXXXXXXXXXXXRRWMRARXXXXXXXXXXXXXXXXXXEVRGRPLPDVADAKVEDEQNQVEGEARERRGGGSVASRESPSGAAKVRLATQPETPFRDADTAGLPAPSPTMQQDAXXXXXXXXXXXXXXXXSRAREEAWAAARTLAEQKAQSQAMRDAALRASAQAERGAAGANLTDSGXXXXXXXXGFSEEPVAXXXXXXXXXXXXPEPNNSSNPENVTLDTPVAESGQRVDATRPPVAVPAALEVSSGGWRGFFAGRRQEAGGEASATSSVSGSQVSTVVATEPA 563          
BLAST of mRNA_Ecto-sp13_S_contig11966.1678.1 vs. uniprot
Match: D7G411_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G411_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 1.590e-84
Identity = 358/517 (69.25%), Postives = 369/517 (71.37%), Query Frame = 0
Query:   46 GLRDEAPSSATPASAATGTDINALEGSSSGPAAAIPPHAPARSASLSARRGLMESKVREALVLDGHRRGKRPPAQQEDDADAGPSSKTSLVPQAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRLEAEAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQAEERXXXXXXXXXXXXXXXXXXXXXALVLERDCQRNEERRVVSXXXXXXXXXXXXXXXXXXXXXXXVRTRWMRARQEAEARDNKRRLAARREEEVRGRPLPDVADAKAEXXXXXXXXXXXXXGGGGSVASRESPLGAAKVQLATESETPFRDADTAGLPAPSPTMPQDAVATVVPAAVNTSSSSRSRAREEAWAAARTLAEQKARSQAVRDAAWRASAQAERGAAGANLTDTGXXXXXXXAGFSEEPVAXXXXXXXXXXXXPEPNNSSNPGNVTLDTPVAESGLRANATPPSVAVPAALGVSSGGWRGLFSGRRQEGGGEASATSSVSGSQVSTVVATEPA 562
            G+RDEAPSSATPA AA GTDINALEGSSSGPA A+PPHAPAR ASLSAR+GLME K          R+G+                                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRLEAEAV XXXXXXXXXXXXXXXXXXXXXXXXXXXVLQAEERXXXXXXXXXXXXXXXXXXXXX          NE+RRV +XXXXXXXXXXXXXXXXXXXXXXX R RWMRARQEAE              EV  RPLPDVADAKA               GGGSVASRESP GAAKVQLATE ETPFRDADTAGLPAPSPTM QD                 SRAREEAWAAARTLAEQKARSQA+RDAA RASAQAERG  GANLTD  XXXXXXX         XXXXXXXXXXXX  PNNSSN GNVTLDTPVAESG RA+A  P VAVPAAL VSSGGWRG F+GRRQEG         VSGSQVSTV+ TEPA
Sbjct:   66 GVRDEAPSSATPAYAAAGTDINALEGSSSGPAEAVPPHAPARPASLSARQGLMERKAGGDAEATRQRKGEE----------------------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLRLEAEAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLQAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEDRRVAAXXXXXXXXXXXXXXXXXXXXXXXSR-RWMRARQEAEXXXXXXXXXXXXXXEVGRRPLPDVADAKAREERNQEEGIARERRGGGSVASRESPSGAAKVQLATEPETPFRDADTAGLPAPSPTMQQDXXXXXXXXXXXXXXXXXSRAREEAWAAARTLAEQKARSQAMRDAALRASAQAERGGTGANLTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPNNSSNLGNVTLDTPVAESGQRADAPRPRVAVPAALEVSSGGWRGFFAGRRQEGXXXXXXXXXVSGSQVSTVIVTEPA 547          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig11966.1678.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L011_9PHAE9.620e-14372.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G411_ECTSI1.590e-8469.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 266..286
NoneNo IPR availableCOILSCoilCoilcoord: 205..260
NoneNo IPR availableCOILSCoilCoilcoord: 182..202

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig11966contigEcto-sp13_S_contig11966:2..2342 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig11966.1678.1mRNA_Ecto-sp13_S_contig11966.1678.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig11966 2..2546 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig11966.1678.1 ID=prot_Ecto-sp13_S_contig11966.1678.1|Name=mRNA_Ecto-sp13_S_contig11966.1678.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=562bp
MSFLLNYLDGALDTVTGRYDGDEGDETSNDEGSTVGAMDGDNNTEGLRDE
APSSATPASAATGTDINALEGSSSGPAAAIPPHAPARSASLSARRGLMES
KVREALVLDGHRRGKRPPAQQEDDADAGPSSKTSLVPQAGDDAETTRQRK
GEQEEEGLLHAGEEEEEEKSGREDERRRREETLRLEAEAVEAERRRQRVL
QEEESKRLEEAAAAAAAAVLQAEERERQRLRVLEDEERERERERQRALVL
ERDCQRNEERRVVSEAAAAAAVAAEEERTAREKEEEEVRTRWMRARQEAE
ARDNKRRLAARREEEVRGRPLPDVADAKAEEEQNQEEGEARERGGGGSVA
SRESPLGAAKVQLATESETPFRDADTAGLPAPSPTMPQDAVATVVPAAVN
TSSSSRSRAREEAWAAARTLAEQKARSQAVRDAAWRASAQAERGAAGANL
TDTGSGAGASTAGFSEEPVAVAPRRGRGGGDGPEPNNSSNPGNVTLDTPV
AESGLRANATPPSVAVPAALGVSSGGWRGLFSGRRQEGGGEASATSSVSG
SQVSTVVATEPA
back to top