prot_Ecto-sp13_S_contig6100.16776.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6100.16776.1
Unique Nameprot_Ecto-sp13_S_contig6100.16776.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length274
Homology
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 9.900e-118
Identity = 179/203 (88.18%), Postives = 180/203 (88.67%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 273
            LG TGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR                      VESS+AQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC
Sbjct:   19 LGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRE---------------------VESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 200          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: D8LEW7_ECTSI (Rab22, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW7_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 9.500e-75
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 186
            LG TGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR
Sbjct:   19 LGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 134          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.280e-70
Identity = 114/178 (64.04%), Postives = 136/178 (76.40%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 248
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKMIMV+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP++I IA+AGNK DLE +R                      V S+ A+AYADEIGA+F+ETSAK+ T+V D+F+ +SK+LP
Sbjct:   16 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKRE---------------------VPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 4.580e-70
Identity = 120/204 (58.82%), Postives = 147/204 (72.06%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSS-GASSSCC 273
            LG TGVGKSSLV RF+TN FK Y ESTIGASFMSK+IMVDGSP+KFQIWDTAGQEKYHSLAPMYY+GA AAIVVYDITK  +F+TLK+W+ EL++QGP++I IAVAGNK DLES+R                      V+++ AQ+YA  IGA F+ETSAK   +V ++F  +SK+LP++E         LNL +  G+S  CC
Sbjct:   17 LGDTGVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESERE---------------------VDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNK-LNLKAGKGSSGGCC 198          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 218 bits (554), Expect = 9.120e-68
Identity = 119/207 (57.49%), Postives = 143/207 (69.08%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP----KREPLPPASGVDLNLDSSGASSSCC 273
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DLE +R                      V +S A+AYA EIGA+F+ETSAK+ T+V D+F+++S+ LP    +   LP    VD        SS CC
Sbjct:   17 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKRE---------------------VPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEI--VDPYGGGKKKSSGCC 200          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 216 bits (549), Expect = 5.040e-67
Identity = 110/178 (61.80%), Postives = 134/178 (75.28%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 248
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DLE +R                      V +S A+AYA+EIGA+F+ETSAK+  +V D+F+++S+ LP
Sbjct:   16 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKRE---------------------VPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 172          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 212 bits (540), Expect = 1.090e-65
Identity = 109/178 (61.24%), Postives = 131/178 (73.60%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 248
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S +TLK W+ EL+  GP +I IA+AGNK DL+ +R                      V S  A+AYADEIGA+F+ETSAK+ T+V D+F  +S++LP
Sbjct:   15 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKRE---------------------VSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLP 171          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.150e-64
Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 248
            LG TGVGKSSLV RFVTNNFKPYSESTIGASFM+KM+++D +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  SF TLK W+ EL+  GP+DI IA+AGNK DL  QR                      VE   A+ YA  IGA+++ETSAK  ++V+ +FV+++ RLP
Sbjct:   97 LGDTGVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQRE---------------------VEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 253          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: F0Y0I1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0I1_AURAN)

HSP 1 Score: 205 bits (521), Expect = 8.380e-63
Identity = 109/202 (53.96%), Postives = 132/202 (65.35%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSC 272
            LG TGVGKSSL  R+VTN FKPYSESTIGASFMSKMI+VDG+P K QIWDTAGQEKYHSLAPMYYRGA AAI+V+DITK  S   LK W+ ELQ QGP+ +A+A+AGNK DL  +R                      V +  A+A+A +IGA++ ETSAKD T+V  +F +L +R P           DL  D++     C
Sbjct:   16 LGDTGVGKSSLAQRYVTNTFKPYSESTIGASFMSKMILVDGAPCKCQIWDTAGQEKYHSLAPMYYRGAAAAILVFDITKPASLDKLKAWVRELQTQGPERLALAIAGNKADLADRRA---------------------VPADDAKAFAADIGALYCETSAKDDTNVSQLFADLVRRAPAGGAARTDDAFDLGHDAAPRRGCC 196          
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.310e-62
Identity = 109/178 (61.24%), Postives = 131/178 (73.60%), Query Frame = 0
Query:   71 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 248
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DL+ +R                      V S+ A+AYADEIGA+F+ETSAK+ T+V D+F  +S++LP
Sbjct:  207 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKRE---------------------VSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLP 363          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE80_9PHAE9.900e-11888.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEW7_ECTSI9.500e-7599.14Rab22, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
F0WNT1_9STRA2.280e-7064.04Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6... [more]
A0A7S2SUM8_9STRA4.580e-7058.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D0N0I0_PHYIT9.120e-6857.49Rab5 family GTPase, putative n=2 Tax=Phytophthora ... [more]
K3X978_GLOUD5.040e-6761.80Uncharacterized protein n=22 Tax=Oomycota TaxID=47... [more]
A0A067CI89_SAPPC1.090e-6561.24Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7S1CIP5_9STRA3.150e-6460.67Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
F0Y0I1_AURAN8.380e-6353.96Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A3R7AA57_9STRA1.310e-6261.24Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 66..87
score: 36.02
coord: 107..129
score: 47.9
coord: 169..182
score: 39.59
coord: 225..247
score: 35.63
coord: 89..105
score: 30.04
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 71..250
e-value: 5.0E-55
score: 198.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 71..261
e-value: 5.9E-5
score: 21.4
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 71..250
e-value: 9.0E-14
score: 61.8
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 71..245
e-value: 1.7E-7
score: -22.3
NoneNo IPR availableGENE3D3.40.50.300coord: 69..261
e-value: 5.6E-56
score: 191.0
NoneNo IPR availablePANTHERPTHR24073:SF366RAS-RELATED PROTEIN RAB-5Ccoord: 66..186
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 66..186
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 31..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 20..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..273
NoneNo IPR availablePROSITEPS51419RABcoord: 61..273
score: 27.063
IPR001806Small GTPasePFAMPF00071Rascoord: 71..247
e-value: 7.2E-49
score: 165.5
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 71..189
e-value: 4.8E-23
score: 79.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 70..253

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6100contigEcto-sp13_S_contig6100:3381..5395 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6100.16776.1mRNA_Ecto-sp13_S_contig6100.16776.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6100 3381..5395 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6100.16776.1 ID=prot_Ecto-sp13_S_contig6100.16776.1|Name=mRNA_Ecto-sp13_S_contig6100.16776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MLSRCRCRMCHANREKVLKSLCLGCCSVHLRLSAGTVLVQQQEQQQQPLL
ATMPNTVNVPSAHVFGCWPCLGRTGVGKSSLVHRFVTNNFKPYSESTIGA
SFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKM
HSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKI
PSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKR
EPLPPASGVDLNLDSSGASSSCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase