mRNA_Ecto-sp13_S_contig6100.16776.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6100.16776.1
Unique NamemRNA_Ecto-sp13_S_contig6100.16776.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A6H5KE80_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE80_9PHAE)

HSP 1 Score: 344 bits (883), Expect = 9.900e-118
Identity = 179/203 (88.18%), Postives = 180/203 (88.67%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 819
            LG TGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR                      VESS+AQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC
Sbjct:   19 LGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRE---------------------VESSMAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSCC 200
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: D8LEW7_ECTSI (Rab22, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW7_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 9.500e-75
Identity = 115/116 (99.14%), Postives = 115/116 (99.14%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 558
            LG TGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR
Sbjct:   19 LGDTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQR 134
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: F0WNT1_9STRA (Rab5 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WNT1_9STRA)

HSP 1 Score: 224 bits (571), Expect = 2.280e-70
Identity = 114/178 (64.04%), Postives = 136/178 (76.40%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 744
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKMIMV+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP++I IA+AGNK DLE +R                      V S+ A+AYADEIGA+F+ETSAK+ T+V D+F+ +SK+LP
Sbjct:   16 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIMVENTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLATLKNWVKELKQLGPENIVIAIAGNKSDLEDKRE---------------------VPSAQAKAYADEIGALFIETSAKEDTNVSDLFISISKQLP 172
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A7S2SUM8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUM8_9STRA)

HSP 1 Score: 223 bits (569), Expect = 4.580e-70
Identity = 120/204 (58.82%), Postives = 147/204 (72.06%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSS-GASSSCC 819
            LG TGVGKSSLV RF+TN FK Y ESTIGASFMSK+IMVDGSP+KFQIWDTAGQEKYHSLAPMYY+GA AAIVVYDITK  +F+TLK+W+ EL++QGP++I IAVAGNK DLES+R                      V+++ AQ+YA  IGA F+ETSAK   +V ++F  +SK+LP++E         LNL +  G+S  CC
Sbjct:   17 LGDTGVGKSSLVLRFITNEFKQYQESTIGASFMSKLIMVDGSPIKFQIWDTAGQEKYHSLAPMYYKGAAAAIVVYDITKESTFQTLKDWVAELRSQGPENIVIAVAGNKSDLESERE---------------------VDTATAQSYAHSIGASFLETSAKTKANVDEIFSNISKQLPEQERAGQYHNK-LNLKAGKGSSGGCC 198
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: D0N0I0_PHYIT (Rab5 family GTPase, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N0I0_PHYIT)

HSP 1 Score: 218 bits (554), Expect = 9.120e-68
Identity = 119/207 (57.49%), Postives = 143/207 (69.08%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP----KREPLPPASGVDLNLDSSGASSSCC 819
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DLE +R                      V +S A+AYA EIGA+F+ETSAK+ T+V D+F+++S+ LP    +   LP    VD        SS CC
Sbjct:   17 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKRE---------------------VPASQARAYAGEIGALFIETSAKEDTNVSDLFIQISQALPTASAESNALPEI--VDPYGGGKKKSSGCC 200
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: K3X978_GLOUD (Uncharacterized protein n=22 Tax=Oomycota TaxID=4762 RepID=K3X978_GLOUD)

HSP 1 Score: 216 bits (549), Expect = 5.040e-67
Identity = 110/178 (61.80%), Postives = 134/178 (75.28%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 744
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKMI+V+ +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DLE +R                      V +S A+AYA+EIGA+F+ETSAK+  +V D+F+++S+ LP
Sbjct:   16 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMIVVNDTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLTTLKNWVKELKQLGPDNIVIAIAGNKSDLEEKRE---------------------VPASQARAYAEEIGALFIETSAKEDRNVSDLFIQISQALP 172
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A067CI89_SAPPC (Uncharacterized protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CI89_SAPPC)

HSP 1 Score: 212 bits (540), Expect = 1.090e-65
Identity = 109/178 (61.24%), Postives = 131/178 (73.60%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 744
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S +TLK W+ EL+  GP +I IA+AGNK DL+ +R                      V S  A+AYADEIGA+F+ETSAK+ T+V D+F  +S++LP
Sbjct:   15 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLQTLKNWVKELKQLGPDNIVIAIAGNKSDLKDKRE---------------------VSSETAKAYADEIGAVFIETSAKEDTNVSDLFKTISQQLP 171
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A7S1CIP5_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CIP5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 3.150e-64
Identity = 108/178 (60.67%), Postives = 131/178 (73.60%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 744
            LG TGVGKSSLV RFVTNNFKPYSESTIGASFM+KM+++D +P+K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  SF TLK W+ EL+  GP+DI IA+AGNK DL  QR                      VE   A+ YA  IGA+++ETSAK  ++V+ +FV+++ RLP
Sbjct:   97 LGDTGVGKSSLVLRFVTNNFKPYSESTIGASFMAKMMIIDSTPIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRAASFATLKNWVRELKQLGPEDIVIAIAGNKSDLAPQRE---------------------VEEEDAREYARSIGALYIETSAKTDSNVKQLFVDIAMRLP 253
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: F0Y0I1_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0I1_AURAN)

HSP 1 Score: 205 bits (521), Expect = 8.380e-63
Identity = 109/202 (53.96%), Postives = 132/202 (65.35%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKREPLPPASGVDLNLDSSGASSSC 816
            LG TGVGKSSL  R+VTN FKPYSESTIGASFMSKMI+VDG+P K QIWDTAGQEKYHSLAPMYYRGA AAI+V+DITK  S   LK W+ ELQ QGP+ +A+A+AGNK DL  +R                      V +  A+A+A +IGA++ ETSAKD T+V  +F +L +R P           DL  D++     C
Sbjct:   16 LGDTGVGKSSLAQRYVTNTFKPYSESTIGASFMSKMILVDGAPCKCQIWDTAGQEKYHSLAPMYYRGAAAAILVFDITKPASLDKLKAWVRELQTQGPERLALAIAGNKADLADRRA---------------------VPADDAKAFAADIGALYCETSAKDDTNVSQLFADLVRRAPAGGAARTDDAFDLGHDAAPRRGCC 196
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BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Match: A0A3R7AA57_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7AA57_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.310e-62
Identity = 109/178 (61.24%), Postives = 131/178 (73.60%), Query Frame = 1 
Query:  211 LGRTGVGKSSLVHRFVTNNFKPYSESTIGASFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKMHSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKIPSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLP 744
            LG TGVGKSSLV RFVTNNF+PYSESTIGASFMSKM++V    +K+QIWDTAGQEKYHSLAPMYYRGA AAIVVYDIT+  S  TLK W+ EL+  GP +I IA+AGNK DL+ +R                      V S+ A+AYADEIGA+F+ETSAK+ T+V D+F  +S++LP
Sbjct:  207 LGDTGVGKSSLVLRFVTNNFRPYSESTIGASFMSKMLLVGDQAIKYQIWDTAGQEKYHSLAPMYYRGAAAAIVVYDITRKQSLVTLKNWVKELKQLGPDNIVIAIAGNKSDLDDKRE---------------------VSSATAKAYADEIGAVFIETSAKEDTNVLDLFKTISQQLP 363
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6100.16776.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE80_9PHAE9.900e-11888.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEW7_ECTSI9.500e-7599.14Rab22, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
F0WNT1_9STRA2.280e-7064.04Rab5 family GTPase putative n=3 Tax=Albugo TaxID=6... [more]
A0A7S2SUM8_9STRA4.580e-7058.82Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D0N0I0_PHYIT9.120e-6857.49Rab5 family GTPase, putative n=2 Tax=Phytophthora ... [more]
K3X978_GLOUD5.040e-6761.80Uncharacterized protein n=22 Tax=Oomycota TaxID=47... [more]
A0A067CI89_SAPPC1.090e-6561.24Uncharacterized protein n=7 Tax=Saprolegniaceae Ta... [more]
A0A7S1CIP5_9STRA3.150e-6460.67Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]
F0Y0I1_AURAN8.380e-6353.96Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A3R7AA57_9STRA1.310e-6261.24Uncharacterized protein n=4 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6100contigEcto-sp13_S_contig6100:3381..5395 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score232.6
Seed ortholog evalue2.1e-58
Seed eggNOG ortholog2880.D8LEW7
Preferred nameRAB31
Model size822
KEGG koko:K07891
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000166,GO:0001775,GO:0001882,GO:0001883,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0005794,GO:0005802,GO:0005829,GO:0005856,GO:0005886,GO:0006810,GO:0006887,GO:0006892,GO:0006893,GO:0006897,GO:0006898,GO:0006955,GO:0006996,GO:0007032,GO:0008104,GO:0008150,GO:0008152,GO:0009719,GO:0009725,GO:0009987,GO:0010008,GO:0010033,GO:0010243,GO:0010256,GO:0012505,GO:0012506,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030139,GO:0030141,GO:0030659,GO:0030667,GO:0031090,GO:0031410,GO:0031623,GO:0031901,GO:0031982,GO:0031984,GO:0032535,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032588,GO:0032868,GO:0032869,GO:0032870,GO:0032940,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0036230,GO:0042119,GO:0042221,GO:0042886,GO:0043001,GO:0043112,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043299,GO:0043312,GO:0043434,GO:0044237,GO:0044260,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045184,GO:0045321,GO:0045335,GO:0046903,GO:0048193,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051716,GO:0061951,GO:0065007,GO:0065008,GO:0070727,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0072659,GO:0090066,GO:0090150,GO:0090382,GO:0097159,GO:0097367,GO:0097494,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0098805,GO:0098876,GO:0099503,GO:1901265,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1990778
Exons4
EggNOG free text desc.GTPase activity
EggNOG OGsKOG0092@1,KOG0092@2759
Cds size822
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04031,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463851.0022693-CDS-Ecto-sp13_S_contig6100:3380..35781681463851.0022693-CDS-Ecto-sp13_S_contig6100:3380..3578Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6100 3381..3578 -
1681463851.0135493-CDS-Ecto-sp13_S_contig6100:3902..41751681463851.0135493-CDS-Ecto-sp13_S_contig6100:3902..4175Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6100 3903..4175 -
1681463851.0235186-CDS-Ecto-sp13_S_contig6100:4535..45901681463851.0235186-CDS-Ecto-sp13_S_contig6100:4535..4590Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6100 4536..4590 -
1681463851.040738-CDS-Ecto-sp13_S_contig6100:5099..53951681463851.040738-CDS-Ecto-sp13_S_contig6100:5099..5395Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6100 5100..5395 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6100.16776.1prot_Ecto-sp13_S_contig6100.16776.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6100 3381..5395 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6100.16776.1

>prot_Ecto-sp13_S_contig6100.16776.1 ID=prot_Ecto-sp13_S_contig6100.16776.1|Name=mRNA_Ecto-sp13_S_contig6100.16776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=274bp
MLSRCRCRMCHANREKVLKSLCLGCCSVHLRLSAGTVLVQQQEQQQQPLL
ATMPNTVNVPSAHVFGCWPCLGRTGVGKSSLVHRFVTNNFKPYSESTIGA
SFMSKMIMVDGSPMKFQIWDTAGQEKYHSLAPMYYRGAGAAIVVYDITKM
HSFRTLKEWINELQAQGPQDIAIAVAGNKRDLESQRVSQSGLRFLLWLKI
PSFFSCLCVESSVAQAYADEIGAMFVETSAKDATHVQDMFVELSKRLPKR
EPLPPASGVDLNLDSSGASSSCC*
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mRNA from alignment at Ecto-sp13_S_contig6100:3381..5395-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6100.16776.1 ID=mRNA_Ecto-sp13_S_contig6100.16776.1|Name=mRNA_Ecto-sp13_S_contig6100.16776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2015bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6100:3381..5395- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTCCCGGTGTAGGTGTAGAATGTGCCATGCGAATCGCGAGAAGGT
CCTCAAGTCGCTCTGTCTGGGATGCTGTTCGGTGCATCTGCGTCTGTCTG
CCGGAACGGTTTTAGTCCAACAACAAGAACAACAACAACAACCTCTCTTG
GCAACGATGCCTAACACGGTGAATGTCCCTTCCGCGCATGTCTTTGGATG
TTGGCCTTGTCTTGGGCGAACAGGAGTGGGGAAGTCCAGCCTGGTGCATA
GGTTCGTGACAAACAACTTCAAGCCATACAGCGAGAGCACGATCGGGTGA
GGCAAATATGTTTGCTCTTGGGGGCGTGTTCACTTATCATGTTTTGGCGC
ATGGCTGGTGGCAGTATTGCTTCACCAGCTAATAAACCGTGGGTAAACTT
AGTGTTCTCTGTAAAATCGAAAGGGAACAGCAGTTGTTGCCTACGGAATT
GTAGCCTGTTTTACTAAGTATTCTGTGTGATATCGGAAGAGAATAACAAC
TTTTGACTACGAAATTCCACAGGGACCCTTCTCGGCCCGGACCCCCTGGG
CTACACGTGTTGTTGTTGTTGTCGCGTTTGCTGCTGTATTCCTAGGCTAC
CAGCGTTGGCAATCCCGCTCCGTCATATGGTAAACCGTGCGCTATTCCAC
CCCGCAACAGACGACCGACGTATCCACAGGGTCATGGGCGTATGCGCCCG
CTTTAGAAAAAGACACAAGTGCACCCTGCTGTTGCTCGCTGCTCTGTTTA
GTTTCAAGCCCATCGCGTTGTCGTGTACGTTTCGTTTCGTCTCCGAACCC
AACAGGGCGTCCTTCATGTCGAAGATGATCATGGTGGATGGTTCGCCGAT
GAAATTTCAGGTGAGGAAGTTCTCCCCCCCCCTGTCCGGTGGGAAAAGTA
GAAGGAAGGAAGCTACAGCAGTGAGATGCTTGAGGCATGGAATAGCCAGG
AGAAGACGGTAGCTGTACTGGGGCATAGGGGTTGAGAAGATGGAAAGTGA
TCTCGATACTATTGATAGACTAGGGGAAAATTTTTGAGCCACCTGTGGCA
AAGTAGGCAGGAACGATTGGCCGTCGGTGATCGGCCCTGTGGTGTGGGAA
CAATGCTCCGTCCTCTCGAGGATGCGCGGTCACTGGTCTTAGCACCTCAG
GCATGCAAAACACAAGAGTACGCCCCCCCACCCCCACCCCCCTGCCTACG
GCCTCCGCGACGCTGCGTAGATCTGGGACACCGCGGGGCAGGAGAAGTAC
CACAGCCTGGCCCCGATGTACTACCGAGGGGCGGGCGCCGCTATCGTGGT
GTACGACATCACGAAGATGCACTCCTTCCGTACCTTGAAAGAGTGGATAA
ACGAGCTGCAGGCACAGGGACCGCAGGACATCGCGATCGCGGTCGCCGGG
AACAAGCGCGACTTGGAATCGCAGAGAGTGAGTCAGAGTGGACTGAGGTT
TTTGCTGTGGCTCAAGATCCCGTCATTCTTTTCCTGCCTGTGCGTGCTCT
GTATGTGACGCGCGTGCTGCAAGGTTTTCGGGCGCCTGGTTGCACACACG
TCTTGTGCCGGGTTACCAGATGTAGAGAAATGGTGCCCCAACCCGACCAG
CCGCGGACGGCAAAGCAATCGAACAATGCATGGCTGTTTATCGGCTTACT
GAAGACGCCTGCTTGTTTTTTTTGGCGCTTGCTTGTTCCATCTGTGATGC
TTAATTTACCCCGCCCCCACGTGCTTGTTCTGTTTCTCCTCTCCCTAACC
CCCCCACCGTCCGCTTTTCTCTCCCTACTCTCTCTCTCGCCGCCACGCGT
GTCATCGTCCTCAGGAGGTGGAGTCCTCGGTGGCCCAGGCATACGCGGAC
GAGATCGGTGCGATGTTCGTGGAGACGTCTGCGAAGGACGCCACTCACGT
GCAGGACATGTTTGTCGAGCTCAGCAAACGCCTCCCGAAGCGGGAACCCT
TGCCGCCGGCCTCGGGCGTGGATCTCAATCTCGACTCATCTGGGGCATCC
TCCTCCTGCTGCTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6100:3381..5395-

>mRNA_Ecto-sp13_S_contig6100.16776.1 ID=mRNA_Ecto-sp13_S_contig6100.16776.1|Name=mRNA_Ecto-sp13_S_contig6100.16776.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=822bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6100:3381..5395- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCTGTCCCGGTGTAGGTGTAGAATGTGCCATGCGAATCGCGAGAAGGT
CCTCAAGTCGCTCTGTCTGGGATGCTGTTCGGTGCATCTGCGTCTGTCTG
CCGGAACGGTTTTAGTCCAACAACAAGAACAACAACAACAACCTCTCTTG
GCAACGATGCCTAACACGGTGAATGTCCCTTCCGCGCATGTCTTTGGATG
TTGGCCTTGTCTTGGGCGAACAGGAGTGGGGAAGTCCAGCCTGGTGCATA
GGTTCGTGACAAACAACTTCAAGCCATACAGCGAGAGCACGATCGGGGCG
TCCTTCATGTCGAAGATGATCATGGTGGATGGTTCGCCGATGAAATTTCA
GATCTGGGACACCGCGGGGCAGGAGAAGTACCACAGCCTGGCCCCGATGT
ACTACCGAGGGGCGGGCGCCGCTATCGTGGTGTACGACATCACGAAGATG
CACTCCTTCCGTACCTTGAAAGAGTGGATAAACGAGCTGCAGGCACAGGG
ACCGCAGGACATCGCGATCGCGGTCGCCGGGAACAAGCGCGACTTGGAAT
CGCAGAGAGTGAGTCAGAGTGGACTGAGGTTTTTGCTGTGGCTCAAGATC
CCGTCATTCTTTTCCTGCCTGTGCGTGGAGTCCTCGGTGGCCCAGGCATA
CGCGGACGAGATCGGTGCGATGTTCGTGGAGACGTCTGCGAAGGACGCCA
CTCACGTGCAGGACATGTTTGTCGAGCTCAGCAAACGCCTCCCGAAGCGG
GAACCCTTGCCGCCGGCCTCGGGCGTGGATCTCAATCTCGACTCATCTGG
GGCATCCTCCTCCTGCTGCTGA
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