mRNA_Ecto-sp13_S_contig610.16774.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig610.16774.1
Unique NamemRNA_Ecto-sp13_S_contig610.16774.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: D7FLD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLD9_ECTSI)

HSP 1 Score: 593 bits (1530), Expect = 9.300e-214
Identity = 312/315 (99.05%), Postives = 313/315 (99.37%), Query Frame = 1 
Query:    1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY 945
            MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGET WKE+ SSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY
Sbjct:    1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETVWKEDGSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPSPHY 315
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: A0A836CBZ9_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBZ9_9STRA)

HSP 1 Score: 338 bits (867), Expect = 8.250e-113
Identity = 191/324 (58.95%), Postives = 227/324 (70.06%), Query Frame = 1 
Query:    1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSRE---GEKVYMRLVTGSCDNRVRFWRCAV---------GETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAGPTPS 936
            M+ + L  I+T H+  IHDAQLDYY +KLATASSD  I IF++ G+   N+   L+GH+GPVWQV WAHP+FGVLLASCSYD SV+IH E+PPG W+ VH H LH   XXXXXXXXXXXXXXXXXXXXXXXX          W  +  QD KLGCN+VSWAP+ S G ++   G  V MRLVTGSCDNRVR W+C           G+  W +E +   S P H+DWVRDVAWAPATGMP N +ASC ED+ V IWTQ +    W   +M  F APVWR+SWS+TGNVLAVS GD DV+LWKQN+EG WE +S+V EE G  P+
Sbjct:    1 MSVSTLVNIETQHNEMIHDAQLDYYSRKLATASSDRTIEIFDINGEVT-NRSAVLTGHEGPVWQVAWAHPRFGVLLASCSYDGSVLIHTESPPGVWTTVHAHRLHXXXXXXXXXXXXXXXXXXXXXXXXXXXSILQHMDDDSWQVSTFQDGKLGCNAVSWAPYGSGGGKDDAMGRDV-MRLVTGSCDNRVRVWKCPAPTAGEVLGQGQLVWTDELTH--SEPAHTDWVRDVAWAPATGMPFNTIASCGEDKAVYIWTQQEGGTEWTLTKMHEFSAPVWRLSWSVTGNVLAVSHGDDDVTLWKQNIEGRWEMVSSV-EEGGRGPN 319
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: A0A7S2UZ04_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ04_9STRA)

HSP 1 Score: 317 bits (811), Expect = 4.170e-104
Identity = 198/325 (60.92%), Postives = 228/325 (70.15%), Query Frame = 1 
Query:    1 MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSR-EGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGP-----------------WAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEA 921
            MA     TIDT H   IHDAQ DYY KK+AT SSD  I I++V GD + N+   L+GHDGPVWQV WAHPKFGVLLASCSYD  VIIHRE+P   W+ +H H  H S XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       QDS LGCN++SWAP+N++GS+ E   V MR+VTGSCDN+VRFWR    E  W+EE    D    HSDWVRDVAWAP++GMPCN+VAS SED  V IW Q++ SG                  W    +  F APVWRVSWS+TGNVLAVSSGD  V+LWKQ+L+G W  +S+V EEA
Sbjct:    1 MAADQPVTIDTQHEDMIHDAQFDYYAKKVATCSSDRTIQIYDVTGDVY-NKSAVLTGHDGPVWQVAWAHPKFGVLLASCSYDGQVIIHRESPQSCWTQIHVHRFHESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHFQDSPLGCNAISWAPYNAIGSQNERGAVEMRVVTGSCDNKVRFWRST--ERGWEEEAKQADV---HSDWVRDVAWAPSSGMPCNLVASGSEDGQVHIWQQTETSGAPTSGGGAASSPASGQAVWQPHLVHNFGAPVWRVSWSVTGNVLAVSSGDHMVTLWKQSLDGTWFQVSSVKEEA 319
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: K3XB55_GLOUD (Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4782 RepID=K3XB55_GLOUD)

HSP 1 Score: 315 bits (806), Expect = 9.760e-104
Identity = 175/306 (57.19%), Postives = 216/306 (70.59%), Query Frame = 1 
Query:    7 TTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 924
            T  + +IDT H   IHDAQLDYYGK+LAT SSD  + +++V G+  +N+   L+GH+GPVWQV WAHPKFG LLASCSYD  VII+RE     W+  + H      XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFN+LGS+       R+VT SCD  ++ W  A G+TEW +E  S  S+P HSDWVRD AWAP+TGMP N++ASCSED+ V IW+Q++ +GPW    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    2 TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTVKVYDVTGEVQNNE-QLLTGHEGPVWQVAWAHPKFGALLASCSYDGKVIIYREQSLNQWAQTYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVISYSTEG-WSVSHFKDSSLGCNAVSWAPFNALGSKGETGPIRRIVTASCDKTIKIWSLAEGQTEWTKEDIS--SAPAHSDWVRDAAWAPSTGMPVNLIASCSEDKHVYIWSQTEENGPWKRELLHTFEAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: D0NKZ1_PHYIT (Protein transport protein SEC13 n=16 Tax=Peronosporaceae TaxID=4777 RepID=D0NKZ1_PHYIT)

HSP 1 Score: 310 bits (794), Expect = 6.640e-102
Identity = 174/303 (57.43%), Postives = 213/303 (70.30%), Query Frame = 1 
Query:   16 LQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 924
            + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   L+GH+GPVWQV WAHPKFGVLLA+CSYD  VII+RE     W+  + H  H S XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFNS+GS+       R++T SCD  ++ W    GETEW ++  S  S P HSDWVRDVAWAP+TG+P N++ASCSED+ V IW+Q+     W    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    5 ILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVAGDVQNNE-QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAFHDSXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEG-WSVSHFKDSALGCNAVSWAPFNSVGSQGPSGPIRRVMTASCDKTIKIWSLPEGETEWTKQELS--SVPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDSSWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: H3GAW1_PHYRM (Uncharacterized protein n=7 Tax=Peronosporaceae TaxID=4777 RepID=H3GAW1_PHYRM)

HSP 1 Score: 307 bits (787), Expect = 7.630e-101
Identity = 173/303 (57.10%), Postives = 212/303 (69.97%), Query Frame = 1 
Query:   16 LQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 924
            + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   L+GH+GPVWQV WAHPKFGVLLA+CSYD  VII+RE     W+  + H  H   XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFNS+GS+       R+VT SCD  ++ W    GETEW ++  S  S+P H DWVRDVAWAP+TG+P N++ASCSED+ V IW+Q+     W    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    5 ILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE-QILTGHEGPVWQVAWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYMHGFHXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEG-WSVSHFKDSALGCNAVSWAPFNSVGSQGPTGPIRRVVTASCDKTIKIWSLQEGETEWTKQELS--SAPAHGDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQTAEDTVWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: A0A3M6VUN6_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VUN6_9STRA)

HSP 1 Score: 307 bits (787), Expect = 1.160e-97
Identity = 173/303 (57.10%), Postives = 212/303 (69.97%), Query Frame = 1 
Query:   16 LQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 924
            + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   L+GH+GPVWQV WAHPKFGVLLA+CSYD  VII+RE     W+  + H +    XXXXXXXXXXXXXXXXXXXXXXX           W  +  +DS LGCN+VSWAPFNS+GS+       R+VT SCD  ++ W    GE EW ++  S  S+P HSDWVRDVAWAP+TG+P N++ASCSED+ V IW+QS     W    + TF APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W  IS+V +EAG
Sbjct:    5 ILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE-QILTGHEGPVWQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAIXXXXXXXXXXXXXXXXXXXXXXXXXXXVSVLSYSPEG-WSVSHFKDSALGCNAVSWAPFNSVGSQSPAGPIRRVVTASCDKTIKIWSLTEGEKEWTKQELS--SAPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWSQSAEDSAWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSV-DEAG 302
[Close]
BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: A0A2D4BZT8_PYTIN (Protein transport protein SEC13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZT8_PYTIN)

HSP 1 Score: 307 bits (787), Expect = 1.110e-95
Identity = 176/312 (56.41%), Postives = 208/312 (66.67%), Query Frame = 1 
Query:    7 TTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAW-----ECISTVPEEAGP 927
            T  + +IDT H   IHDAQLDYYGK+LAT SSD  I +++V GD  +N+   LSGH+GPVWQV WAHPKFGVLLASCSYD  VII +E     W+  + H      XXXXXXXXXXXXXXXXXXXXXXXX          W  +  +DS LGC +VSWAPFNSLGS+       R+VT SCD  ++ W    G TEW ++  S  S+P H DWVRD AWAP TGMP NI+ASCSED+ V IWTQS+ +GPW    +  F APVWRVSWS+TGNVLAVSSGD  V+LWK+ L+  W       I+  P   GP
Sbjct:  136 TAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVTGDVQNNE-QILSGHEGPVWQVSWAHPKFGVLLASCSYDGKVIIFKEQSLNQWTQAYVHAFXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVLSYTAEG-WVVSHFKDSSLGCXAVSWAPFNSLGSKNEAGPIKRVVTASCDKTIKIWSLPEGHTEWTKQEIS--SAPAHVDWVRDAAWAPGTGMPVNIIASCSEDKHVYIWTQSEENGPWKRELLHVFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIPWVPRSIAAPPTRTGP 443
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: A0A7R9ZAI8_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7R9ZAI8_9STRA)

HSP 1 Score: 289 bits (740), Expect = 4.650e-93
Identity = 158/309 (51.13%), Postives = 203/309 (65.70%), Query Frame = 1 
Query:   25 IDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVHKHE-LHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAP---FNSLGSREGEKVYMR----LVTGSCDNRVRFWRCAVGETEWKEERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGP-WAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTVPEEAG 924
            +DT H   +HDAQLDYYG KLAT+SSD  I I++V G+S  +   +L GH+GPVW+V W+HPKFG++LASCS+D SV+IHRE+ P  W+ +H    LH SS         XXXXXXXXXXXXXX           W   +I+D+ LG N+VSWAP   FN  G+ EGE V       +VTG CDNR+RFW  +    +W+EE  +    P H+DWVRDVAWAPA     ++VASCSED+ V++WT++   G  W    +  F APVWR+SWS+TG+VLAVSSGDS V+LWK  L+G W  +S V + AG
Sbjct:   39 VDTQHDDMVHDAQLDYYGCKLATSSSDRTIKIYDVSGNSFAHTA-TLQGHEGPVWEVSWSHPKFGIVLASCSFDGSVLIHRESRPREWTLLHAARGLHDSSVNGVAFAPHXXXXXXXXXXXXXXVSVLTHNEDDTWGVEYIRDNSLGVNAVSWAPYAPFNEAGAGEGEGVAAAPQPTVVTGGCDNRIRFWTRSAQNGQWEEEPGALGPGPAHTDWVRDVAWAPAIIPGVDVVASCSEDKTVIVWTRTGGRGSSWEPKLLHAFEAPVWRLSWSVTGSVLAVSSGDSSVTLWKAGLDGVWRRVSHVEDVAG 346
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BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Match: A0A7S2JUM7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JUM7_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.830e-91
Identity = 161/304 (52.96%), Postives = 205/304 (67.43%), Query Frame = 1 
Query:    7 TTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHNQLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPP-GTWSPVHKHELHTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWHTTFIQDSKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWKEER-SSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQASGP-WAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECISTV 909
            T A  +IDT H   +HDAQLDYYG KLAT SSD  + ++ V  D   +   +L+GH+GPV+++ WAHPKFG +LAS S+D SV++HRE  P G+W+ VH H +H   XXXXXXXXXXXXXXXXXXXXXX            W  TF QD+ LG NSVS+AP + + + +  K  MRLV G CDN+VRFW+       W+++   S  +   H+DWVRDVAWAP T    N VASCSED+ V+IWTQS+     W    + TF APVWRVSWS+TG +LAVSSGDSDV++WKQ L+G W  +++V
Sbjct:   22 TPAPVSIDTQHDDMVHDAQLDYYGVKLATCSSDRTVKVYSVAKDQEVSHTATLTGHEGPVYEIAWAHPKFGSILASSSFDGSVLLHREVQPMGSWTLVHAHRMHXXXXXXXXXXXXXXXXXXXXXXXXXKVSVITHREDDSWDATFFQDNMLGVNSVSFAPCSFMSASDDAKDGMRLVVGGCDNKVRFWKLNAETKTWEQDDFDSSKADVTHTDWVRDVAWAP-TVSSFNTVASCSEDKTVIIWTQSEDDRTEWKPVLLHTFDAPVWRVSWSVTGTILAVSSGDSDVTMWKQELDGKWSQVASV 324
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig610.16774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLD9_ECTSI9.300e-21499.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CBZ9_9STRA8.250e-11358.95WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A7S2UZ04_9STRA4.170e-10460.92Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XB55_GLOUD9.760e-10457.19Uncharacterized protein n=2 Tax=Pythiaceae TaxID=4... [more]
D0NKZ1_PHYIT6.640e-10257.43Protein transport protein SEC13 n=16 Tax=Peronospo... [more]
H3GAW1_PHYRM7.630e-10157.10Uncharacterized protein n=7 Tax=Peronosporaceae Ta... [more]
A0A3M6VUN6_9STRA1.160e-9757.10Uncharacterized protein n=3 Tax=Peronosporaceae Ta... [more]
A0A2D4BZT8_PYTIN1.110e-9556.41Protein transport protein SEC13 n=1 Tax=Pythium in... [more]
A0A7R9ZAI8_9STRA4.650e-9351.13Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]
A0A7S2JUM7_9STRA2.830e-9152.96Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig610contigEcto-sp13_S_contig610:13584..15458 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score592.4
Seed ortholog evalue1.2e-166
Seed eggNOG ortholog2880.D7FLD9
Preferred nameSEC13
Model size948
KEGG koko:K14004
KEGG Pathwayko03013,ko04141,ko04150,map03013,map04141,map04150
KEGG ModuleM00404,M00427
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000278,GO:0000280,GO:0000323,GO:0000785,GO:0000819,GO:0002164,GO:0002165,GO:0002168,GO:0002376,GO:0002474,GO:0002478,GO:0002495,GO:0002504,GO:0003002,GO:0003674,GO:0003682,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005643,GO:0005654,GO:0005694,GO:0005700,GO:0005703,GO:0005730,GO:0005737,GO:0005764,GO:0005765,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005829,GO:0006323,GO:0006355,GO:0006357,GO:0006508,GO:0006511,GO:0006606,GO:0006807,GO:0006810,GO:0006886,GO:0006888,GO:0006900,GO:0006901,GO:0006903,GO:0006913,GO:0006950,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007076,GO:0007275,GO:0007346,GO:0007389,GO:0007591,GO:0008104,GO:0008150,GO:0008152,GO:0008363,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009719,GO:0009725,GO:0009790,GO:0009791,GO:0009792,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010243,GO:0010468,GO:0010498,GO:0010556,GO:0010557,GO:0010564,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010973,GO:0012505,GO:0012506,GO:0012507,GO:0014070,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016050,GO:0016192,GO:0017038,GO:0019219,GO:0019222,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019941,GO:0022402,GO:0022607,GO:0023051,GO:0023056,GO:0030117,GO:0030120,GO:0030127,GO:0030133,GO:0030134,GO:0030135,GO:0030163,GO:0030261,GO:0030433,GO:0030658,GO:0030659,GO:0030660,GO:0030662,GO:0031080,GO:0031081,GO:0031090,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0031410,GO:0031503,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031982,GO:0031984,GO:0032006,GO:0032008,GO:0032465,GO:0032467,GO:0032501,GO:0032502,GO:0032870,GO:0032954,GO:0032955,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0033993,GO:0034504,GO:0034605,GO:0034613,GO:0034622,GO:0034629,GO:0034976,GO:0035017,GO:0035075,GO:0035077,GO:0035079,GO:0035293,GO:0035459,GO:0035859,GO:0036314,GO:0036315,GO:0036503,GO:0040003,GO:0042175,GO:0042221,GO:0042303,GO:0042335,GO:0042337,GO:0042802,GO:0042886,GO:0043085,GO:0043087,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043547,GO:0043632,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044427,GO:0044428,GO:0044432,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045787,GO:0045893,GO:0045931,GO:0045935,GO:0045944,GO:0046907,GO:0048002,GO:0048193,GO:0048194,GO:0048199,GO:0048207,GO:0048208,GO:0048285,GO:0048475,GO:0048518,GO:0048519,GO:0048522,GO:0048583,GO:0048584,GO:0048856,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051169,GO:0051170,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051252,GO:0051254,GO:0051276,GO:0051302,GO:0051336,GO:0051345,GO:0051603,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051664,GO:0051668,GO:0051716,GO:0051726,GO:0051781,GO:0060255,GO:0060260,GO:0060261,GO:0061024,GO:0061700,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070727,GO:0070887,GO:0071103,GO:0071310,GO:0071390,GO:0071396,GO:0071407,GO:0071495,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072594,GO:0080090,GO:0090068,GO:0090110,GO:0090114,GO:0097305,GO:0097306,GO:0097708,GO:0098588,GO:0098687,GO:0098796,GO:0098805,GO:0098813,GO:0098827,GO:0098852,GO:0140014,GO:1901564,GO:1901565,GO:1901575,GO:1901654,GO:1901655,GO:1901698,GO:1901700,GO:1901701,GO:1901891,GO:1901893,GO:1902412,GO:1902531,GO:1902533,GO:1902680,GO:1903047,GO:1903432,GO:1903436,GO:1903438,GO:1903490,GO:1903506,GO:1903508,GO:1904263,GO:1990893,GO:2000112,GO:2000142,GO:2000144,GO:2001141
Exons3
EggNOG free text desc.positive regulation of TORC1 signaling
EggNOG OGsKOG1332@1,KOG1332@2759
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-12_007790.1
Cds size948
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03019,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463850.8638742-CDS-Ecto-sp13_S_contig610:13583..139591681463850.8638742-CDS-Ecto-sp13_S_contig610:13583..13959Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig610 13584..13959 -
1681463850.8773868-CDS-Ecto-sp13_S_contig610:14396..146361681463850.8773868-CDS-Ecto-sp13_S_contig610:14396..14636Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig610 14397..14636 -
1681463850.8892372-CDS-Ecto-sp13_S_contig610:15126..154581681463850.8892372-CDS-Ecto-sp13_S_contig610:15126..15458Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig610 15127..15458 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig610.16774.1prot_Ecto-sp13_S_contig610.16774.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig610 13584..15458 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig610.16774.1

>prot_Ecto-sp13_S_contig610.16774.1 ID=prot_Ecto-sp13_S_contig610.16774.1|Name=mRNA_Ecto-sp13_S_contig610.16774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MATTALQTIDTHHSGNIHDAQLDYYGKKLATASSDCKINIFEVVGDSHHN
QLDSLSGHDGPVWQVGWAHPKFGVLLASCSYDKSVIIHRETPPGTWSPVH
KHELHTSSVNSIAWAPHELGLMLACASSDGRVSILQHQPNDEWHTTFIQD
SKLGCNSVSWAPFNSLGSREGEKVYMRLVTGSCDNRVRFWRCAVGETEWK
EERSSHDSSPRHSDWVRDVAWAPATGMPCNIVASCSEDRGVVIWTQSQAS
GPWAAAEMKTFPAPVWRVSWSITGNVLAVSSGDSDVSLWKQNLEGAWECI
STVPEEAGPTPSPHY*
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mRNA from alignment at Ecto-sp13_S_contig610:13584..15458-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig610.16774.1 ID=mRNA_Ecto-sp13_S_contig610.16774.1|Name=mRNA_Ecto-sp13_S_contig610.16774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1875bp|location=Sequence derived from alignment at Ecto-sp13_S_contig610:13584..15458- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTACGACCGCCCTGCAAACGATAGACACACATCACAGCGGGAACAT
CCACGACGCGCAGCTGGACTACTATGGCAAGAAGCTCGCCACCGCGTCAA
GTGACTGCAAGATCAACATCTTTGAGGTTGTCGGGGACAGCCACCACAAC
CAACTAGACTCCCTCTCCGGGCACGACGGTCCGGTTTGGCAAGTCGGTTG
GGCACACCCGAAGTTTGGTGTGCTCCTGGCTTCCTGCTCGTACGATAAAT
CCGTCATCATCCACCGGGAGACGCCGCCGGGAACCTGGAGCCCGGTACAC
AAGCACGAACTCCATACGTCCAGTGTCAACAGGTGCGAATAACTTACTCT
GAACGCGAACGGTGGATTTCTCCCAATACATGTACTCGAAACGTTTCCAA
CTCTCTGGAACAACATCACTCGCATTCCGGACTGCTGTAAGACATCCTGG
TAGCGGGTACTTGCTACTGCTGTAAGCGCGTTGTGGTCGATCCCAAACTA
CTACATTCGAGTGGTAGTTGCTGTTCTGAAGCAGTAACATGACGCAGGAC
ATGTCGCAGGTCACGCAGTAGCGGTTGGTGTTGGTTGCTACGTAACCCGT
CCCACATCCATCGTATTTCACCCCGAGTCTCCAGGTCAAGCATGTACTCC
CCGCCGAGCGATTTGCCCGGCGTTGCGCCATGGTCCTTGCATATATTACC
AGATTGTAATACACTTTTAAGTGAGTTGGCCCCAAAAAGCGTCCAAGTGG
CAAATTGAAAAACGAAATCCACACCCCTAACTACTGTACGCCCTACACTA
TCCCGTACTCGCTGCTGTACAGCATTGCATGGGCGCCCCATGAGCTAGGC
TTGATGCTCGCGTGTGCTTCGAGCGACGGCCGCGTGAGCATTCTTCAGCA
CCAGCCGAACGACGAGTGGCATACCACATTCATCCAAGATTCCAAGCTTG
GCTGTAACTCTGTGAGCTGGGCTCCTTTTAACAGCTTGGGATCGAGGGAG
GGCGAGAAAGTGTACATGCGGCTAGTCACCGGTAGCTGCGACAACCGGGT
CAGGTTTTGGAGGTAAGCCGGATTGTGGGTTGGAAGCGAAATTTTTTCCC
ACGATCACGTAGCGAAGGTGGCACTTACATGTTCTCTAGTACTTGGGCGA
TCATGTGCTTGGTGGCCTGTAGTCATGTGACAACTTTTTTCTCTCTCGAA
GGGTTCCTAAGATTGCAGATTAGCTATCCCAAACACATATTTGCGCCATT
TGCCGTGTGCCCCTCTCTCGGACCAAAGACGAAGATTACTCATAAGTTGT
ATCGTTCTTATGCCCGACATGTGATTGAGATGTTACTTGGTTGCGGAAGG
CACTATGTCGAGAACTGCGGAGATCCGTAAACCCGAAAACCTTCGCAAAG
AAGTCATTGCGGCTCGGCTGTTTTACGCCGCTTGAAGGTAATCACACTTC
TCTGGACAACAACTTAACACACAGTTTGCTCCCGACCATAAATACGCAGA
TGCGCGGTGGGGGAGACGGAGTGGAAAGAAGAGAGGAGCTCCCATGACTC
CTCCCCCCGGCACTCGGACTGGGTGCGAGACGTGGCCTGGGCGCCCGCGA
CGGGCATGCCGTGCAATATCGTCGCCAGCTGTTCGGAGGATAGAGGTGTG
GTCATCTGGACGCAGTCGCAAGCCTCGGGACCCTGGGCAGCGGCTGAAAT
GAAGACCTTCCCGGCGCCGGTGTGGCGTGTTTCTTGGTCCATCACCGGAA
ACGTTCTCGCCGTTTCGTCGGGTGACAGCGATGTGTCGCTCTGGAAGCAG
AACCTGGAGGGTGCGTGGGAGTGTATTTCTACGGTGCCGGAGGAGGCAGG
TCCCACGCCTTCGCCTCACTACTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig610:13584..15458-

>mRNA_Ecto-sp13_S_contig610.16774.1 ID=mRNA_Ecto-sp13_S_contig610.16774.1|Name=mRNA_Ecto-sp13_S_contig610.16774.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig610:13584..15458- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGCTACGACCGCCCTGCAAACGATAGACACACATCACAGCGGGAACAT
CCACGACGCGCAGCTGGACTACTATGGCAAGAAGCTCGCCACCGCGTCAA
GTGACTGCAAGATCAACATCTTTGAGGTTGTCGGGGACAGCCACCACAAC
CAACTAGACTCCCTCTCCGGGCACGACGGTCCGGTTTGGCAAGTCGGTTG
GGCACACCCGAAGTTTGGTGTGCTCCTGGCTTCCTGCTCGTACGATAAAT
CCGTCATCATCCACCGGGAGACGCCGCCGGGAACCTGGAGCCCGGTACAC
AAGCACGAACTCCATACGTCCAGTGTCAACAGCATTGCATGGGCGCCCCA
TGAGCTAGGCTTGATGCTCGCGTGTGCTTCGAGCGACGGCCGCGTGAGCA
TTCTTCAGCACCAGCCGAACGACGAGTGGCATACCACATTCATCCAAGAT
TCCAAGCTTGGCTGTAACTCTGTGAGCTGGGCTCCTTTTAACAGCTTGGG
ATCGAGGGAGGGCGAGAAAGTGTACATGCGGCTAGTCACCGGTAGCTGCG
ACAACCGGGTCAGGTTTTGGAGATGCGCGGTGGGGGAGACGGAGTGGAAA
GAAGAGAGGAGCTCCCATGACTCCTCCCCCCGGCACTCGGACTGGGTGCG
AGACGTGGCCTGGGCGCCCGCGACGGGCATGCCGTGCAATATCGTCGCCA
GCTGTTCGGAGGATAGAGGTGTGGTCATCTGGACGCAGTCGCAAGCCTCG
GGACCCTGGGCAGCGGCTGAAATGAAGACCTTCCCGGCGCCGGTGTGGCG
TGTTTCTTGGTCCATCACCGGAAACGTTCTCGCCGTTTCGTCGGGTGACA
GCGATGTGTCGCTCTGGAAGCAGAACCTGGAGGGTGCGTGGGAGTGTATT
TCTACGGTGCCGGAGGAGGCAGGTCCCACGCCTTCGCCTCACTACTGA
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