prot_Ecto-sp13_S_contig61.16769.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig61.16769.1
Unique Nameprot_Ecto-sp13_S_contig61.16769.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length517
Homology
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BLAST of mRNA_Ecto-sp13_S_contig61.16769.1 vs. uniprot
Match: A0A6H5KPK2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPK2_9PHAE)

HSP 1 Score: 637 bits (1642), Expect = 1.060e-223
Identity = 460/551 (83.48%), Postives = 471/551 (85.48%), Query Frame = 0 
Query:    1 MSGRTLRPAVASSACSLVTKHNERATDTSLSFETPKKWAPLQAPPKVVAAPVAFATDEFADFGWPGDDETKLAEKEELDDLLRLGLELGDLECVFGNTNLNCDTADDDAEERDFENAGDCGSGKGGGWGKEPYLAGGATEELLLDADD------------------------------ALFDLPDLDLNCLEDKGDRGQGKHGCGSDSPKNTH-----EEAATEPPPDLEVLKQMSPAPSXXXXXXXXXXXXGSATLAVTPAPPSSAELPLRETPGALPGENLALAFDAAGDEHRPITMVDLTNAPAXXXXXTADAGGVAPSGVESNSDGKPDGANEHRESRPCRMTATGDTTIIDTRAVASVPANAVAGVPTRLLDAVDLWESAANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAPALEDPALLVAAPATXXXXXXXXXXXXXXXXXXXXXXRATKGKKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG 516
            MSGRTLRPA ASSACSLVTKHNE ATDT L FETPKKWAPLQAPPKV+AAPVAFATDEFADFGWPGDDETKLAEKEELDDLLRLGLELGDLECVFGNT+LNCDTADDDAEE DFENAGD GS +GGGWGKEPY AGGATEELLLD DD                              ALFDLPDLDL+ LEDKGDRGQ KHGCGSDSPK+T      EEAAT+PPPDLEVL+QMSPA  XXXXXXXXXXXX            S AELP RETPGALPGENL +AFDA GDEHRPIT+VDLT+APA XXX T DAGGVAPS  E NSDGKPDGANEHRESR CRMT T D TIIDTRA ASV A+AVAGVPTRLLDAVDLWESAANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RTAPALEDPALLVAAPAT XXXXXXXXXXXXXXXXXXXXXRATKGKKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG
Sbjct:    1 MSGRTLRPAAASSACSLVTKHNEGATDTGLPFETPKKWAPLQAPPKVIAAPVAFATDEFADFGWPGDDETKLAEKEELDDLLRLGLELGDLECVFGNTDLNCDTADDDAEEGDFENAGDGGSDRGGGWGKEPYFAGGATEELLLDTDDXXXXXXXXXXXXXXXXXXXXXXXXXXDLQDALFDLPDLDLDRLEDKGDRGQEKHGCGSDSPKSTQVDCGAEEAATKPPPDLEVLQQMSPAXXXXXXXXXXXXXXXXXXXXXXXXXXSPAELPRRETPGALPGENLVVAFDAVGDEHRPITVVDLTDAPAPXXXPTVDAGGVAPSDSEDNSDGKPDGANEHRESRACRMTDTVDITIIDTRAGASVSADAVAGVPTRLLDAVDLWESAANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--RTAPALEDPALLVAAPATGXXXXXXXXXXXXXXXXXXXXXRATKGKKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG 549
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BLAST of mRNA_Ecto-sp13_S_contig61.16769.1 vs. uniprot
Match: D7FLV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLV8_ECTSI)

HSP 1 Score: 316 bits (810), Expect = 2.480e-101
Identity = 266/285 (93.33%), Postives = 271/285 (95.09%), Query Frame = 0 
Query:  232 AELPLRETPGALPGENLALAFDAAGDEHRPITMVDLTNAPAXXXXXTADAGGVAPSGVESNSDGKPDGANEHRESRPCRMTATGDTTIIDTRAVASVPANAVAGVPTRLLDAVDLWESAANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTAPALEDPALLVAAPATXXXXXXXXXXXXXXXXXXXXXXRATKGKKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG 516
            AELP RETPGALPGENLA+AFDA  DEHRPIT+VDLT+APAXXXX T DAGGV+PSGVE NSDGKPDG NEHRESRPCRMTATGDTTIID RAVASV A+  AGVPTRLLDAVDLWESAANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   RTAPALEDPALLVAAPATXXXXXXXXXXXXXXXXXXXXXXRATKGKKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG
Sbjct:   33 AELPRRETPGALPGENLAVAFDAVRDEHRPITVVDLTDAPAXXXXPTVDAGGVSPSGVERNSDGKPDGDNEHRESRPCRMTATGDTTIIDARAVASVSADPAAGVPTRLLDAVDLWESAANAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---RTAPALEDPALLVAAPATXXXXXXXXXXXXXXXXXXXXXXRATKGKKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGKAVGSLSAISRYWGSGG 314
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig61.16769.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KPK2_9PHAE1.060e-22383.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FLV8_ECTSI2.480e-10193.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig61contigEcto-sp13_S_contig61:27018..30783 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig61.16769.1mRNA_Ecto-sp13_S_contig61.16769.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig61 27018..30783 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig61.16769.1 ID=prot_Ecto-sp13_S_contig61.16769.1|Name=mRNA_Ecto-sp13_S_contig61.16769.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=517bp
MSGRTLRPAVASSACSLVTKHNERATDTSLSFETPKKWAPLQAPPKVVAA
PVAFATDEFADFGWPGDDETKLAEKEELDDLLRLGLELGDLECVFGNTNL
NCDTADDDAEERDFENAGDCGSGKGGGWGKEPYLAGGATEELLLDADDAL
FDLPDLDLNCLEDKGDRGQGKHGCGSDSPKNTHEEAATEPPPDLEVLKQM
SPAPSPPAATAAAAAATGSATLAVTPAPPSSAELPLRETPGALPGENLAL
AFDAAGDEHRPITMVDLTNAPAPAPAPTADAGGVAPSGVESNSDGKPDGA
NEHRESRPCRMTATGDTTIIDTRAVASVPANAVAGVPTRLLDAVDLWESA
ANAKKKKAAAAAATAAAASRERANRSAAMNKLSNTASSASSSSSSSKKKN
EFGKRRRSSGGGGRTAPALEDPALLVAAPATATSTTTGGGGGSASKVKGK
GKGRATKGKKVDPLVTLRDARGMARKPLIVQWLKSDGCESDEEAEAALGK
AVGSLSAISRYWGSGG*
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