prot_Ecto-sp13_S_contig60947.16760.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60947.16760.1
Unique Nameprot_Ecto-sp13_S_contig60947.16760.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length106
Homology
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: D7FMZ3_ECTSI (Flagellar associated protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FMZ3_ECTSI)

HSP 1 Score: 160 bits (406), Expect = 5.180e-44
Identity = 84/106 (79.25%), Postives = 89/106 (83.96%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRHVLDVAD 106
            QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSV+EYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQ        +  +C   VD+ + D  D
Sbjct:   41 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVEEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQGAIKYEQDELAACKGLVDQCLGDDPD 146
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A7S2B7F7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B7F7_9STRA)

HSP 1 Score: 132 bits (333), Expect = 6.040e-34
Identity = 66/106 (62.26%), Postives = 80/106 (75.47%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRHVLDVAD 106
            QNFPR+RAALSLL YCY+ M D+ AA  MYE+LVKICP VDEYK+Y AQ+LYKAG+YPEATRAAVRVD+PQY QRM+ LQ        +  +C A +D+ + D  D
Sbjct:   37 QNFPRARAALSLLGYCYFMMSDFLAAAKMYEELVKICPDVDEYKMYYAQALYKAGLYPEATRAAVRVDNPQYSQRMLMLQSAIKYEQDELAACKALLDQCLPDDPD 142
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A7S2RIL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RIL6_9STRA)

HSP 1 Score: 116 bits (291), Expect = 8.250e-31
Identity = 59/103 (57.28%), Postives = 69/103 (66.99%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRHVLD 103
            QNFPRSRAALSLL+Y YY +QD+  A  MYEQL K+ P V EY++Y AQSLYKAG+YPEATRA  +VD PQY QRM  LQ           +C A  D  + D
Sbjct:   48 QNFPRSRAALSLLAYSYYMLQDFPNAVRMYEQLTKLFPEVQEYRIYFAQSLYKAGLYPEATRACFQVDDPQYAQRMAMLQAAIKYEQEDLRACEALADTCLTD 150
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A7S2RJ83_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJ83_9STRA)

HSP 1 Score: 121 bits (303), Expect = 8.170e-30
Identity = 58/103 (56.31%), Postives = 76/103 (73.79%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRHVLD 103
            QNFPRSRAALSLL +CY+ M D+  A  MYE+L+K+CP V+EYK+Y AQSLYKAG+YPEATRA++RVDSPQY QR+  L+        +  +C + +D  + D
Sbjct:   45 QNFPRSRAALSLLGHCYFMMTDFIQAAKMYEELIKVCPDVEEYKMYYAQSLYKAGLYPEATRASMRVDSPQYTQRITMLKAAVKYQMDELGACKSLLDHCLPD 147
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A2R5GSG9_9STRA (Tetratricopeptide repeat protein 30A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GSG9_9STRA)

HSP 1 Score: 119 bits (299), Expect = 3.010e-29
Identity = 60/103 (58.25%), Postives = 72/103 (69.90%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRHVLD 103
            QNFPRSRAALSLL+Y YY +QDY  A  MYEQL K+ P V EY++Y AQSLYKAG+YPEATRA  +VD PQY QRMV LQ       +   +C +  D+ + D
Sbjct:   55 QNFPRSRAALSLLAYSYYMLQDYPNAVRMYEQLTKLFPDVQEYRIYFAQSLYKAGLYPEATRACFQVDDPQYTQRMVMLQASIKYEQNDLRACESLADQCLAD 157
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A482ST77_9ARCH (Tetratricopeptide repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482ST77_9ARCH)

HSP 1 Score: 112 bits (281), Expect = 5.930e-28
Identity = 52/80 (65.00%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQ 80
            QNFPRSRAALSLL YCYY++ D+ +A   YEQLV ICP V+EYK+Y +QSLYK+G+Y EA RAA+RV+  QY QR++ LQ
Sbjct:   34 QNFPRSRAALSLLGYCYYRLGDFTSAAQCYEQLVSICPDVEEYKLYYSQSLYKSGLYAEAMRAAIRVEGEQYSQRVLMLQ 113
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A7S3H5F2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H5F2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.250e-27
Identity = 54/80 (67.50%), Postives = 65/80 (81.25%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQ 80
            QNFPRSRAALSLL YCYY+  D+ +A   YEQLV ICP V+EYK+Y AQSLYKAG+YP+A RAA+RV+  QY QR++ LQ
Sbjct:   42 QNFPRSRAALSLLGYCYYRTGDFTSAAQSYEQLVGICPDVEEYKLYYAQSLYKAGLYPDAVRAAIRVEGEQYAQRVLMLQ 121
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A812TK29_9DINO (Ttc30a protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TK29_9DINO)

HSP 1 Score: 112 bits (279), Expect = 1.540e-26
Identity = 55/106 (51.89%), Postives = 75/106 (70.75%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRHVLDVAD 106
            Q FPRSRAALSLL +CYY MQD+++A   YEQLV+  P V+EYK+YLAQSL+KAG+Y +AT+A +RVD+ +Y+QR++ L         +  +C   VD+ V D  D
Sbjct:   58 QTFPRSRAALSLLGHCYYHMQDFRSAALTYEQLVRFHPEVEEYKMYLAQSLFKAGLYEDATKACMRVDNEKYEQRLLQLHAAIKYEQDELAACTTLVDQCVPDEPD 163
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A813A192_9DINO (Ttc30a protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A192_9DINO)

HSP 1 Score: 108 bits (270), Expect = 1.700e-26
Identity = 51/80 (63.75%), Postives = 64/80 (80.00%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQ 80
            QNFPRSRAALSLL YCYY +QD++AAT  YEQLV+  P V+EYK+Y AQSLYKAG+Y +A++ A+ VD  ++ QRM  LQ
Sbjct:   40 QNFPRSRAALSLLGYCYYYLQDFRAATQTYEQLVQFHPEVEEYKIYYAQSLYKAGIYADASKVAMSVDGAEHSQRMSMLQ 119
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Match: A0A7S1G6M3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6M3_9STRA)

HSP 1 Score: 110 bits (274), Expect = 7.320e-26
Identity = 56/106 (52.83%), Postives = 71/106 (66.98%), Query Frame = 0 
Query:    1 QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQSLYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRHVLDVAD 106
            QNFPRSRAALSLL YCYY +QD+  A   YEQLVK  P V+EYK+Y AQ+L++AG+Y EATRAA+RVD  QY  +++ LQ        +   C   +D+ V D  D
Sbjct:   59 QNFPRSRAALSLLGYCYYYLQDFGNAAQAYEQLVKFFPEVEEYKIYYAQTLHRAGVYAEATRAALRVDDSQYHHKLLMLQAAIKYEEDELVPCRTLLDQCVPDDPD 164
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60947.16760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMZ3_ECTSI5.180e-4479.25Flagellar associated protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S2B7F7_9STRA6.040e-3462.26Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2RIL6_9STRA8.250e-3157.28Hypothetical protein (Fragment) n=1 Tax=labyrinthu... [more]
A0A7S2RJ83_9STRA8.170e-3056.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2R5GSG9_9STRA3.010e-2958.25Tetratricopeptide repeat protein 30A n=1 Tax=Honda... [more]
A0A482ST77_9ARCH5.930e-2865.00Tetratricopeptide repeat protein n=1 Tax=archaeon ... [more]
A0A7S3H5F2_9STRA1.250e-2767.50Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A812TK29_9DINO1.540e-2651.89Ttc30a protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A813A192_9DINO1.700e-2663.75Ttc30a protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A7S1G6M3_9STRA7.320e-2652.83Hypothetical protein n=1 Tax=Bicosoecida sp. CB-20... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12895ANAPC3coord: 4..63
e-value: 5.5E-7
score: 29.7
NoneNo IPR availablePANTHERPTHR20931:SF0TETRATRICOPEPTIDE REPEAT PROTEIN 30Acoord: 1..81
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..81
e-value: 2.3E-9
score: 39.0
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 4..64
IPR039941Tetratricopeptide repeat protein 30PANTHERPTHR20931UNCHARACTERIZEDcoord: 1..81
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 7..40
score: 8.172
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..40
score: 8.924

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60947contigEcto-sp13_S_contig60947:374..817 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60947.16760.1mRNA_Ecto-sp13_S_contig60947.16760.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60947 374..817 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60947.16760.1 ID=prot_Ecto-sp13_S_contig60947.16760.1|Name=mRNA_Ecto-sp13_S_contig60947.16760.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=106bp
QNFPRSRAALSLLSYCYYQMQDYKAATTMYEQLVKICPSVDEYKVYLAQS
LYKAGMYPEATRAAVRVDSPQYQQRMVALQVRGSAIPSKGFSCPARVDRH
VLDVAD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039941TT30
IPR019734TPR_repeat
IPR013026TPR-contain_dom