prot_Ecto-sp13_S_contig6094.16758.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6094.16758.1
Unique Nameprot_Ecto-sp13_S_contig6094.16758.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length199
Homology
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: D7FYT8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYT8_ECTSI)

HSP 1 Score: 370 bits (950), Expect = 2.980e-129
Identity = 193/198 (97.47%), Postives = 196/198 (98.99%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTDPT 198
            MRAIFIGLGEA MSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASS+LDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVA VLGFVGCKIGG+FFGYDVSTELSLGIITGVLAAGVAASLILPG+KTDPT
Sbjct:    1 MRAIFIGLGEAAMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSSLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAVVLGFVGCKIGGDFFGYDVSTELSLGIITGVLAAGVAASLILPGDKTDPT 198          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A6H5LB61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB61_9PHAE)

HSP 1 Score: 371 bits (952), Expect = 3.310e-127
Identity = 195/198 (98.48%), Postives = 196/198 (98.99%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTDPT 198
            MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGY+VSTELSL IITGVLAAGVAASLILPG KTDPT
Sbjct:  156 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYNVSTELSLEIITGVLAAGVAASLILPGEKTDPT 353          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A835YKR2_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR2_9STRA)

HSP 1 Score: 248 bits (632), Expect = 1.470e-78
Identity = 126/189 (66.67%), Postives = 156/189 (82.54%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLI 189
            +R +FI LGEA +  F P+LLGFA IL+ S+Y L +E EG G+ DL+DN+++ F+S  L AT+ YDGDKFFTMVDGVRRATPLLLVLVCVELSD+VFAVDSIPAVF  T+DPF+VYTSNI+AI+NLRSL+T+L++AV DL YLRPAVA VL FVG K+  E+FGY+V T LSLG+I+ +L  GVA SL+
Sbjct:  162 LRGVFIALGEAALESFQPVLLGFAAILMVSAYKLFTEEEG-GEADLTDNQVVQFSSKILKATDQYDGDKFFTMVDGVRRATPLLLVLVCVELSDLVFAVDSIPAVFGCTRDPFLVYTSNIFAIVNLRSLYTVLSNAVGDLEYLRPAVAGVLAFVGAKLAAEYFGYEVDTLLSLGVISTLLGGGVALSLL 349          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A835YPV1_9STRA (Integral membrane protein TerC family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV1_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.460e-74
Identity = 127/189 (67.20%), Postives = 152/189 (80.42%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDED-LSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASL 188
            +R IF+ LG+A +  F P+LL FAGILL SSY LL+E  GDG+E+ L +NK++  +   L ATE YDGD+FFTMVDG+RRATPLLLVLVCVE SD+VFAVDSIPAVF VTKDP IVY+SNI+AILNLRSL+T+L++AV DLVYLRPAVA VL FVG K+G E+F   V T LSLGII+ +LA GV  SL
Sbjct:   93 LRGIFVALGQAALESFQPVLLIFAGILLVSSYKLLTEG-GDGEEESLHNNKIVQVSKRLLRATEEYDGDRFFTMVDGMRRATPLLLVLVCVEASDLVFAVDSIPAVFGVTKDPLIVYSSNIFAILNLRSLYTVLSTAVGDLVYLRPAVALVLAFVGLKLGAEYFSVTVDTVLSLGIISTILAGGVGLSL 280          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A7S2V8N4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N4_9STRA)

HSP 1 Score: 224 bits (570), Expect = 4.650e-69
Identity = 114/192 (59.38%), Postives = 147/192 (76.56%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSE---SEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLI 189
            +R I IG+G   + +F PI L FA +L YSSY +L+E    EG+ +EDL DN +I  AS  L  ++ YDG KFFT+VDGV+ ATPLLL LVCVELSDIVFAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+L+ AV +L YL+PAV  VLGF+G K+G E++GY++ST +SLG++  +L  GV  S++
Sbjct:  177 LRGIMIGIGVEAVELFQPIFLVFAAVLAYSSYKILAEWVTGEGEEEEDLEDNAIIKLASKVLTVSDEYDGGKFFTVVDGVKVATPLLLCLVCVELSDIVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLSKAVSELDYLQPAVGIVLGFIGSKLGLEYYGYEISTGVSLGVVAALLGGGVGLSVL 368          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A096PAW2_OSTTA (Integral membrane protein TerC,riboswitch-linked n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A096PAW2_OSTTA)

HSP 1 Score: 218 bits (556), Expect = 3.960e-68
Identity = 111/196 (56.63%), Postives = 149/196 (76.02%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTD 196
            MRA+ I  G   +  F PILL FAGIL++SSY L+S+ + D +ED++DN ++ F S   D ++ YDGD FFT+ +GV+ ATPLLLVL  VE+SD+VFAVDSIPAVF VTKDPFIVYTSN++AIL+LR L+TL+++AV +L YL+ AVA VLGF+G K+  E+ G ++ TELSL ++  +L+ GVAASL LP +  D
Sbjct:   84 MRAVMIVAGVELIENFKPILLVFAGILIFSSYKLISQGDSDEEEDMADNAVVKFCSKLFDVSDDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISTAVGELKYLQTAVALVLGFIGSKMVVEYTGVEIPTELSLAVVVTLLSGGVAASLYLPDDSKD 279          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A7R9W7A1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W7A1_9STRA)

HSP 1 Score: 216 bits (551), Expect = 1.300e-67
Identity = 103/196 (52.55%), Postives = 149/196 (76.02%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTD 196
            MRA+ IGLG A +  FH ILL FAGIL+YSS  +L   EG+ +ED+S+N+++ F+ + +D+ + +DGD+FFT VDGV++ATPL + ++ VELSD+VFAVDSIPAVF VT++P +V+TSN++AI+ LRSL+T+L+ A  DL YL PAVA VLGF+G K+  E+FGY ++TE++L ++  +L  GV  SL   G + +
Sbjct:   62 MRAVMIGLGAAALENFHAILLVFAGILVYSSVKVLFGGEGEEEEDMSENQIVKFSKNLIDSVDQFDGDRFFTFVDGVKKATPLFICMIAVELSDVVFAVDSIPAVFGVTENPLVVFTSNMFAIMGLRSLYTILSKAASDLEYLEPAVAIVLGFIGGKMIAEYFGYKLATEIALAVVVTLLGGGVGLSLYAKGQREE 257          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: W7U074_9STRA (Integral membrane protein TerC n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U074_9STRA)

HSP 1 Score: 219 bits (559), Expect = 4.370e-67
Identity = 115/196 (58.67%), Postives = 152/196 (77.55%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDG-DEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRR-ATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNK 194
            MRA+ +  G   +  F  +LL FAGIL+++S  LL+E EG+G +EDL+DN+++ FA S +   ++YDG  FFT V G  R ATPLLLVL+CVELSD+VFAVDS+PAVF VTKDPFIVYTSNI+AIL LRSL+T+LA+A+ DL YL+PAVA +LG VG K+G E+FG++VS  +SLG+IT +L +GV ASL L  ++
Sbjct:  203 MRAVMVFAGVEAIENFRVVLLAFAGILIFTSVKLLAEDEGEGGEEDLADNQIVKFARSLITTVDTYDGPNFFTEVPGQGRVATPLLLVLICVELSDVVFAVDSVPAVFGVTKDPFIVYTSNIFAILGLRSLYTVLANAMVDLPYLKPAVALILGLVGLKLGAEYFGFEVSNAVSLGVITSLLGSGVWASLYLKPDR 398          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A0A6V3AJS8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3AJS8_HETAK)

HSP 1 Score: 217 bits (552), Expect = 2.070e-66
Identity = 106/198 (53.54%), Postives = 145/198 (73.23%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSE----SEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNK 194
            +R +F+G+G   +  F P+ L F+G L+ SS+ +L E     +GD +EDLS+NK++ F+ S  D T+ +D +KFFT+VDGVR+ATPL + L+ VELSDI FAVDS+PAVF VT DPFIVYTSN++AIL LRSLFT+LA  V DL YL PAV  VLGF+G K+G ++FGY++ + +SL ++   LA G+ ASL+L   K
Sbjct:  165 LRGLFVGIGVEAIEYFQPVFLLFSGFLIVSSFKILQEWASGDDGDEEEDLSENKIVQFSKSLFDTTDEFDEEKFFTVVDGVRKATPLFVCLMSVELSDIAFAVDSVPAVFGVTTDPFIVYTSNLFAILGLRSLFTVLAKLVADLPYLEPAVGVVLGFIGAKLGAQYFGYEIPSAVSLEVVLACLAGGIGASLLLKNEK 362          
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Match: A4S7T9_OSTLU (Uncharacterized protein n=1 Tax=Ostreococcus lucimarinus (strain CCE9901) TaxID=436017 RepID=A4S7T9_OSTLU)

HSP 1 Score: 212 bits (540), Expect = 1.110e-65
Identity = 110/196 (56.12%), Postives = 146/196 (74.49%), Query Frame = 0
Query:    1 MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNKLIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVDSIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAVLGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTD 196
            MRA+ +G G   +  F PILL FAGIL++SSY LL+E E + +ED+ DN ++ F  + L+ +E YDGD FFT+ +GV+ ATPLLLVL  VE+SD+VFAVDSIPAVF VTKDPFIVYTSN++AIL+LR L+TL++ AV +L YL+ AVA VLGF+G K+  E+ G +V TE SL ++  +L  GV ASL+LP    +
Sbjct:   86 MRAVMVGAGVELIENFQPILLVFAGILIFSSYKLLAEGEEE-EEDMGDNAIVKFVGNFLEVSEDYDGDNFFTVQNGVKMATPLLLVLAVVEISDVVFAVDSIPAVFGVTKDPFIVYTSNLFAILSLRQLYTLISKAVGELKYLQTAVALVLGFIGAKMIVEYAGVEVPTEASLAVVVTMLGGGVGASLMLPSEDKE 280          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6094.16758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYT8_ECTSI2.980e-12997.47Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LB61_9PHAE3.310e-12798.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YKR2_9STRA1.470e-7866.67Integral membrane protein TerC family-domain-conta... [more]
A0A835YPV1_9STRA1.460e-7467.20Integral membrane protein TerC family-domain-conta... [more]
A0A7S2V8N4_9STRA4.650e-6959.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A096PAW2_OSTTA3.960e-6856.63Integral membrane protein TerC,riboswitch-linked n... [more]
A0A7R9W7A1_9STRA1.300e-6752.55Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
W7U074_9STRA4.370e-6758.67Integral membrane protein TerC n=3 Tax=Monodopsida... [more]
A0A6V3AJS8_HETAK2.070e-6653.54Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A4S7T9_OSTLU1.110e-6556.12Uncharacterized protein n=1 Tax=Ostreococcus lucim... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005496Integral membrane protein TerCPFAMPF03741TerCcoord: 1..158
e-value: 7.0E-30
score: 104.1
NoneNo IPR availablePANTHERPTHR30238MEMBRANE BOUND PREDICTED REDOX MODULATORcoord: 1..192
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 146..165
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..14
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 135..145
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 15..35
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 166..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..190
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 108..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 36..82
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 83..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 113..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 191..198
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
NoneNo IPR availableTMHMMTMhelixcoord: 141..163
NoneNo IPR availableTMHMMTMhelixcoord: 173..192
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
IPR022369Integral membrane protein TerC, riboswitch-linkedPANTHERPTHR30238:SF0THYLAKOID MEMBRANE PROTEIN TERC, CHLOROPLASTICcoord: 1..192

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6094contigEcto-sp13_S_contig6094:2108..3989 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6094.16758.1mRNA_Ecto-sp13_S_contig6094.16758.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6094 2020..4069 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6094.16758.1 ID=prot_Ecto-sp13_S_contig6094.16758.1|Name=mRNA_Ecto-sp13_S_contig6094.16758.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=199bp
MRAIFIGLGEATMSVFHPILLGFAGILLYSSYTLLSESEGDGDEDLSDNK
LIAFASSTLDATESYDGDKFFTMVDGVRRATPLLLVLVCVELSDIVFAVD
SIPAVFAVTKDPFIVYTSNIWAILNLRSLFTLLASAVEDLVYLRPAVAAV
LGFVGCKIGGEFFGYDVSTELSLGIITGVLAAGVAASLILPGNKTDPT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005496Integral_membrane_TerC
IPR022369Integral_membrane_TerC_rswitch