prot_Ecto-sp13_S_contig609.16752.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig609.16752.1
Unique Nameprot_Ecto-sp13_S_contig609.16752.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length264
Homology
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: D7FH27_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH27_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 6.400e-179
Identity = 256/263 (97.34%), Postives = 260/263 (98.86%), Query Frame = 0
Query:    1 MTLVRQNRVVATVFAFLCLAVPSCDGFLLSPSLALARLRSTPKDGDCAIARQPGGAASQQLLEKPDEMPRTLAEEPRLNRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYAFEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKANKSLKIARDEFKKVNKILGI 263
            MTLVRQNRVVAT+FAFLCLAVPSCDGFLLSPSLALARLRS P DGDCAIARQPGGAASQQ+LEKPDEMPRTLAEEPRLNRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYAFEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFI KANKSLKIA+DEFK+VNKILGI
Sbjct:    1 MTLVRQNRVVATIFAFLCLAVPSCDGFLLSPSLALARLRSAPNDGDCAIARQPGGAASQQVLEKPDEMPRTLAEEPRLNRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYAFEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFIAKANKSLKIAKDEFKEVNKILGI 263          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A835ZH00_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH00_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.760e-44
Identity = 78/145 (53.79%), Postives = 107/145 (73.79%), Query Frame = 0
Query:  121 WQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYT--ARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKANKSLKIARDEFKKVNKILGI 263
            W P G+PK AASWFPLL   Y +L+D+L NW+        DGDA+RR IGT+GVSSPLS+++K F++IRD+E+ ++ +ID+ ++VEAY  VLT L DAENDLYSANFAD+SGGG  KG+ FI  A KS+  A+  F+++ + L +
Sbjct:   14 WGPTGDPKVAASWFPLLKLQYAALKDLLANWDAVAPAGSTDGDAVRRKIGTVGVSSPLSAVKKTFSAIRDSEDVAE-EIDLADFVEAYQAVLTDLSDAENDLYSANFADFSGGGQLKGTNFIKAAKKSIAAAKLNFEEILRTLQL 157          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A7S2UXU3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU3_9STRA)

HSP 1 Score: 129 bits (324), Expect = 7.720e-33
Identity = 68/150 (45.33%), Postives = 93/150 (62.00%), Query Frame = 0
Query:  101 SSLVLAPTGRSYAFEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKANKSLKIA 250
            SS  L P+  S  +      W+  GNPK   +W P +   Y+ LE ++ENW++  A+ +GD +RR +GT+GVSS L+S +KA   +RDA +      D IE+ E   EV+T LGDAEND YSANFA++SGGG  K +QFI KA   +K A
Sbjct:   80 SSATLLPSA-SIGYPPYPQAWKTSGNPKSYKTWAPQVRDGYKRLEIMVENWDEIAAKDNGDEMRRFLGTVGVSSSLTSFKKALYGVRDAVDLPSS-FDEIEWAEKAEEVVTCLGDAENDFYSANFAEFSGGGQLKSAQFIKKARPFVKKA 227          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A7S4DIQ5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIQ5_HETAK)

HSP 1 Score: 111 bits (277), Expect = 5.510e-26
Identity = 59/149 (39.60%), Postives = 92/149 (61.74%), Query Frame = 0
Query:  111 SYAFEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLS--SIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKANKSLKIARDEFKKV 257
            S A+      ++  G P   ++W   L +  + L +VL+NW+    R +GD +R+ IGT+G  S L+  S+++AF  + +A++     +D+ EY E Y EVLTAL DAEN+ YSANFAD+SGGG  K SQFI ++ K + +A+   K++
Sbjct:   81 SVAYPSYPQAYRVTGPPASFSTWLAQLEEGEKILVNVLQNWKDLELRDNGDEVRKFIGTVGPVSALNPVSLKRAFLKLAEADDFPDY-VDLDEYAEKYEEVLTALADAENEAYSANFADFSGGGQLKSSQFIKRSQKRIAVAQRALKEI 228          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A2V3IQN4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IQN4_9FLOR)

HSP 1 Score: 67.0 bits (162), Expect = 3.460e-10
Identity = 36/110 (32.73%), Postives = 61/110 (55.45%), Query Frame = 0
Query:  119 SRWQPEGNPKEAASWFPLLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEA-YMEVLTALGDAENDLYSANFAD 227
            S +   G+PK+  ++ P +   YQ+L  +  +WE  T   DGD +RR++GT+GV SPL +IRK           +  D ++IE +E  + +V+  +   +  LYSA+F +
Sbjct:    8 SDFSTTGDPKKLETYLPQIEAGYQALLGLDRDWEAKTKDFDGDVVRRVLGTVGVKSPLFNIRKPLLKSWQIVADTSTDDELIERLETEWNDVINGISSIDFQLYSASFTE 117          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A5J4Z903_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z903_PORPP)

HSP 1 Score: 62.4 bits (150), Expect = 5.680e-8
Identity = 34/89 (38.20%), Postives = 50/89 (56.18%), Query Frame = 0
Query:  141 YQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDA--EEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFAD 227
            Y  + D+  NW + T   DGD +RR +GT+G SSPL +I+KAF ++  +  E     D D+ E  E Y  VL  +   +  LYS NF++
Sbjct:  104 YDVMLDLERNWTERTKAFDGDIVRRYLGTVGKSSPLFNIKKAFMAVWKSLSERDDVSDADLEELNEKYNLVLDGISGVDFQLYSVNFSE 192          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A813JFT0_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JFT0_POLGL)

HSP 1 Score: 59.7 bits (143), Expect = 7.470e-7
Identity = 36/95 (37.89%), Postives = 57/95 (60.00%), Query Frame = 0
Query:  136 LLAKCYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 230
            +L++   +L D L+NW +  A  DGD+IRR++GT+G +SP+ ++ +A  S+      +  + D++E  EA   V   L  A+   YSANFAD SG
Sbjct:  124 ILSRSEAALADALKNWSRVAA--DGDSIRRVLGTVGATSPVYALPRAMRSL------TAENFDILEQTEA---VEFHLRQADFLAYSANFADSSG 207          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A7S1US29_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1US29_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.180e-5
Identity = 49/172 (28.49%), Postives = 84/172 (48.84%), Query Frame = 0
Query:   79 NRRAYFEQLMYKSVATVAISGASSLVLAPTGRSYAFEEQASRWQPEGNPKEAASWFPLLAK---CYQSLEDVLENWEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKANKSL 247
            +RR         S+  V+   AS++V+AP  R   F+  A       + ++A   F LLA+   CY     +L+++ + + ++ GDA+RR +GT+GV+S +  I K    ++D  +      D++EY E   E    L  AE   Y + F ++S   GT  S F+  A + +
Sbjct:   37 DRRQVLAAFGSASLLLVSTGPASAVVMAPGDRGDVFQPGAKL-----SAEDAKRRF-LLARTDMCY-----LLDHYSEIS-KEGGDAVRRYLGTVGVTSGMYGITKVLKGLQDEAD------DIVEYTETMEEFNAYLYQAEGAAYQSLFVEHSSAKGTPES-FLATAKQDI 189          
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Match: A0A7S2RCQ0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RCQ0_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 3.040e-5
Identity = 37/90 (41.11%), Postives = 52/90 (57.78%), Query Frame = 0
Query:  144 LEDVLENW--EKYTARQDG-DAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVIEYVEAYMEVLTALGDAENDLYSANFADYSG 230
            L+D+L+NW  EK+     G DAIRR +GT G++SPL  I KAF ++RD+E       D IE+ E   E +  L  A++   S+N    SG
Sbjct:  121 LDDLLQNWSTEKWAEEVGGGDAIRRELGTQGITSPLYQIEKAFKALRDSEYVD----DFIEFQETTEEFMDGLFRADSLAASSNNKTGSG 206          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig609.16752.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D7FH27_ECTSI6.400e-17997.34Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZH00_9STRA1.760e-4453.79Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UXU3_9STRA7.720e-3345.33Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S4DIQ5_HETAK5.510e-2639.60Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A2V3IQN4_9FLOR3.460e-1032.73Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A5J4Z903_PORPP5.680e-838.20Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A813JFT0_POLGL7.470e-737.89Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A7S1US29_9STRA1.180e-528.49Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S2RCQ0_9STRA3.040e-541.11Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..263
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..26
score: 0.533
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig609contigEcto-sp13_S_contig609:14948..19004 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig609.16752.1mRNA_Ecto-sp13_S_contig609.16752.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig609 13661..19031 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig609.16752.1 ID=prot_Ecto-sp13_S_contig609.16752.1|Name=mRNA_Ecto-sp13_S_contig609.16752.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=264bp
MTLVRQNRVVATVFAFLCLAVPSCDGFLLSPSLALARLRSTPKDGDCAIA
RQPGGAASQQLLEKPDEMPRTLAEEPRLNRRAYFEQLMYKSVATVAISGA
SSLVLAPTGRSYAFEEQASRWQPEGNPKEAASWFPLLAKCYQSLEDVLEN
WEKYTARQDGDAIRRLIGTIGVSSPLSSIRKAFTSIRDAEEASQGDIDVI
EYVEAYMEVLTALGDAENDLYSANFADYSGGGGTKGSQFITKANKSLKIA
RDEFKKVNKILGI*
back to top