prot_Ecto-sp13_S_contig609.16748.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig609.16748.1
Unique Nameprot_Ecto-sp13_S_contig609.16748.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length271
Homology
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BLAST of mRNA_Ecto-sp13_S_contig609.16748.1 vs. uniprot
Match: A0A6H5JG23_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG23_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 3.650e-98
Identity = 227/283 (80.21%), Postives = 233/283 (82.33%), Query Frame = 0 
Query:    1 MRLHLPLLFLLEF----TGSASGLKISPPR--------RTHTSCTPLKATAGRGGSKVPRKERTSAPDGSKDTREAWRWGGFVRPKVYPASKQSKNKSSSSDAVNNKNGNGGIGAAGSDIGTAMAIVSQTTEVVVATIASTGAANALLTPLYRWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXXDGNITTSPWVAHLRAALPQPVKETYSTVAAVPGQLAKSGEEAAESLSAAKXXXXXXXXXXXXXPDRARGAATQALETARTAREVIMEAPGRVEE 271
            MRLH+ LLFLLEF    TGSASGLKISPPR        RTHTSCTPLKATAGRGGSKVPRKERTSAPDGSKDTREAWRWGGFVRPKVYPASKQ+KN                IG AGSD GTAMAIVSQTTEVVVATIASTGAANALLTPL+RWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXX     T+PWVAHLR  LPQPVK+TYSTVAAVPGQLAKSGE+AA SLSAAK    XXXXXXXXX  RARGA  QALETARTARE I E PGRVEE
Sbjct:    1 MRLHVLLLFLLEFMLEFTGSASGLKISPPRFTAVTTSGRTHTSCTPLKATAGRGGSKVPRKERTSAPDGSKDTREAWRWGGFVRPKVYPASKQNKNXXXXXXXXXXXXXXD-IGTAGSDTGTAMAIVSQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXTNPWVAHLRVVLPQPVKKTYSTVAAVPGQLAKSGEQAAASLSAAKENLAXXXXXXXXXXXRARGATMQALETARTAREAITEVPGRVEE 282
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BLAST of mRNA_Ecto-sp13_S_contig609.16748.1 vs. uniprot
Match: D7FH24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH24_ECTSI)

HSP 1 Score: 149 bits (377), Expect = 3.680e-37
Identity = 120/146 (82.19%), Postives = 124/146 (84.93%), Query Frame = 0 
Query:  112 MAIVSQTTEVVVATIASTGAANALLTPLYRWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXXDGNITT-SPWVAHLRAALPQPVKETYSTVAAVPGQLAKSGEEAAESLSAAKXXXXXXXXXXXXXPDRARGAATQALETAR 256
            MAIVSQTTEVVVATIASTGAANALLTPL+RWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXX       +PWVA LRAALPQPVK+TY TVAAVPGQLAKSGE+AA SLSAAK         XXX P RARGAATQALET R
Sbjct:    1 MAIVSQTTEVVVATIASTGAANALLTPLHRWSSSRKRVAEAVEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPWVALLRAALPQPVKKTYRTVAAVPGQLAKSGEQAAASLSAAKDNLAAAAEVXXXAPGRARGAATQALETTR 146
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig609.16748.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG23_9PHAE3.650e-9880.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH24_ECTSI3.680e-3782.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..271
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.814

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig609contigEcto-sp13_S_contig609:471..1292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig609.16748.1mRNA_Ecto-sp13_S_contig609.16748.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig609 471..1418 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig609.16748.1 ID=prot_Ecto-sp13_S_contig609.16748.1|Name=mRNA_Ecto-sp13_S_contig609.16748.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=271bp
MRLHLPLLFLLEFTGSASGLKISPPRRTHTSCTPLKATAGRGGSKVPRKE
RTSAPDGSKDTREAWRWGGFVRPKVYPASKQSKNKSSSSDAVNNKNGNGG
IGAAGSDIGTAMAIVSQTTEVVVATIASTGAANALLTPLYRWSSSRKRVA
EAVEAAAAAKRREQQQQRALFEQQQQEDGNITTSPWVAHLRAALPQPVKE
TYSTVAAVPGQLAKSGEEAAESLSAAKENLAAVAEAVATAPDRARGAATQ
ALETARTAREVIMEAPGRVEE
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