prot_Ecto-sp13_S_contig6088.16745.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6088.16745.1
Unique Nameprot_Ecto-sp13_S_contig6088.16745.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length328
Homology
BLAST of mRNA_Ecto-sp13_S_contig6088.16745.1 vs. uniprot
Match: A0A6H5KKG7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKG7_9PHAE)

HSP 1 Score: 542 bits (1397), Expect = 2.380e-192
Identity = 303/318 (95.28%), Postives = 305/318 (95.91%), Query Frame = 0
Query:   10 SKEGASRAEGSEMDVEDEVAQSRPKENGAAPLPAVSPALKLAHEVLLKNAEDIKSGNHPKMKADIEIQGKLKRSRLESAKCNSELSITNIEELGSAEARDSNVQTKVDLERTQDELLDDVHQRIRKAKVDGGLVPPNPARAASSDIASEVGGEGGGVKDKXXXXXXXXXLLGKKRARLMPERRFEKITPEAVLAKVEARRVRTVALSDIEMRRDFQAIITDWRDRAKNYLSTYNNSHWTKVTVLQDSFRVRGVTFVRGDPVVVKSRVTGEEFHGEITVVKPKMVFLSLYGGVKTRIFVEHISTGRLTVARAEAKSSVA 327
            SKEG SRAEGSEMDVEDEVAQSRPKENGAAP PAVSPALKLAHEVLLKNAEDIKSGNHPK+KADIEIQGKLKRSRLESAKCNSELSITNIEELGSAEARDSNVQTKV+LERTQDELLDDVHQRIRKAKVDGGLVPPNPARAASS IASEVG         XXXXXXXXX LGKKRARLMPERRFEKITPEAVLAKVEARRVRTVALSDIEMRRDFQAIITDWRDRAKNYLSTYNNSHWTKVTVLQDSFRVRGVTFVRGDPVVVKSRVTGEEFHGEITVVKPKMVFLSLYGGVKTRIFVEHISTGRLTVARAEAKSSVA
Sbjct:   57 SKEGVSRAEGSEMDVEDEVAQSRPKENGAAPPPAVSPALKLAHEVLLKNAEDIKSGNHPKLKADIEIQGKLKRSRLESAKCNSELSITNIEELGSAEARDSNVQTKVELERTQDELLDDVHQRIRKAKVDGGLVPPNPARAASSSIASEVGXXXXXXXXXXXXXXXXXXXLGKKRARLMPERRFEKITPEAVLAKVEARRVRTVALSDIEMRRDFQAIITDWRDRAKNYLSTYNNSHWTKVTVLQDSFRVRGVTFVRGDPVVVKSRVTGEEFHGEITVVKPKMVFLSLYGGVKTRIFVEHISTGRLTVARAEAKSSVA 374          
BLAST of mRNA_Ecto-sp13_S_contig6088.16745.1 vs. uniprot
Match: A0A836CJS7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJS7_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.250e-22
Identity = 86/276 (31.16%), Postives = 123/276 (44.57%), Query Frame = 0
Query:   60 EDIKSGNHPKMKADIEIQGKLKRSRLESAKCNSELSITNIEELGSAEARDSNVQTKVDLERTQDELLDDVHQRIRKAKVDGGL-----------VPPNPARAASSDIASEVGGEGGGVKDKXXXXXXXXXLLGKKRARLMPERRFEKITPEAVLAKVEARRVRTVALSDIEMRRDFQAIITDWRDRAKNYLSTYNNSHWTKVTVLQDS-----FRVRGVTFVRGDPVVVKSRVTGEEFHGEITVVKPKMVFLSLYGGVKTRIFVEHISTGRLTVAR 319
            E+I +G H ++   I+    LKR R E A+ ++E  + N  EL   E R ++   +  L   ++ LLD + Q IR+ + +              +PP P    +         +GG  +D           LG +R           +TP   L            L+D EMR DF AI+ DWR+RA  YL    +  W  V   +DS      RV G     GD V V SRVT EEF GE+T V    VF+ L G + TR+  +H+S+GRL + R
Sbjct:   46 EEINAGTHVEVVEKIKALQGLKRRREEVARAHNEKLLQNARELADFERRAAHATLETALATAKEALLDTIAQEIRRCEEEARKTFSRAEDSRPPLPPPPLHPVNKRAKRPHSKKGGAGRDGGGGRG-----LGSRRP----------VTPSVCLP-----------LTDYEMRCDFAAIMADWRERAMEYLKLVGDGQWAHVDAARDSKGQPAVRVDGSLLKVGDRVSVWSRVTDEEFRGELTAVVGDEVFVRLTGNIPTRLHADHLSSGRLKLRR 295          
BLAST of mRNA_Ecto-sp13_S_contig6088.16745.1 vs. uniprot
Match: A0A836CNX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX5_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.010e-10
Identity = 37/99 (37.37%), Postives = 55/99 (55.56%), Query Frame = 0
Query:  228 ITDWRDRAKNYLSTYNN--SHWTKVTVLQD-----SFRVRGVTFVRGDPVVVKSRVTGEEFHGEITVVKPKMVFLSLYGGVKTRIFVEHISTGRLTVAR 319
            + DWR+RA +YL+      + W  V   +      + R+ G     GD V + SR+TGEEF GE+T V    VF+ L G + TR+ ++H+ TGRL + R
Sbjct:    1 MADWRERAVSYLNHCGQGAADWCHVEPAEGVGGAAAARIDGALLTVGDKVSIWSRLTGEEFQGEMTAVVGPEVFVRLTGNIPTRLHMDHLRTGRLKLRR 99          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6088.16745.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKG7_9PHAE2.380e-19295.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CJS7_9STRA1.250e-2231.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNX5_9STRA4.010e-1037.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6088contigEcto-sp13_S_contig6088:666..5854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6088.16745.1mRNA_Ecto-sp13_S_contig6088.16745.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6088 2..5897 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6088.16745.1 ID=prot_Ecto-sp13_S_contig6088.16745.1|Name=mRNA_Ecto-sp13_S_contig6088.16745.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=328bp
MSPANSTSTSKEGASRAEGSEMDVEDEVAQSRPKENGAAPLPAVSPALKL
AHEVLLKNAEDIKSGNHPKMKADIEIQGKLKRSRLESAKCNSELSITNIE
ELGSAEARDSNVQTKVDLERTQDELLDDVHQRIRKAKVDGGLVPPNPARA
ASSDIASEVGGEGGGVKDKAGGGGSGGLLLGKKRARLMPERRFEKITPEA
VLAKVEARRVRTVALSDIEMRRDFQAIITDWRDRAKNYLSTYNNSHWTKV
TVLQDSFRVRGVTFVRGDPVVVKSRVTGEEFHGEITVVKPKMVFLSLYGG
VKTRIFVEHISTGRLTVARAEAKSSVA*
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