mRNA_Ecto-sp13_S_contig6086.16744.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6086.16744.1
Unique NamemRNA_Ecto-sp13_S_contig6086.16744.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: D8LNK8_ECTSI (Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNK8_ECTSI)

HSP 1 Score: 578 bits (1489), Expect = 3.830e-204
Identity = 289/302 (95.70%), Postives = 293/302 (97.02%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVIDGRQYGIHNFIVPIRGDDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKESSKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFREGSKKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMSRLVHGEGKG 906
            WPGTMGRTANHAMVIAQLVIDG+QYGIHNFIVPIRGDDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVY+SFGSKES KIAYISMMQ   VVIAKDAGRSLAKAATIATRYSIVRRQGFREGSK EHQVLDYTIQMHRLLPL+ASAYGFHFAGVDLNLRLR+LEREHVHGLPPLA  KGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDC YMSRLV GEGKG
Sbjct:  163 WPGTMGRTANHAMVIAQLVIDGKQYGIHNFIVPIRGDDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYASFGSKESGKIAYISMMQVR-VVIAKDAGRSLAKAATIATRYSIVRRQGFREGSK-EHQVLDYTIQMHRLLPLIASAYGFHFAGVDLNLRLRRLEREHVHGLPPLAGGKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCAYMSRLVRGEGKG 462
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A835YNL1_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL1_9STRA)

HSP 1 Score: 338 bits (868), Expect = 1.380e-108
Identity = 186/308 (60.39%), Postives = 213/308 (69.16%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVIDGRQYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKESSKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFREGS-------------KKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMSR 882
            WPGT+GRTANHAMVIAQLVI  R+YGIHNFIVP+R    H PL GVR GDIGPKIGF TMDNG+C FDRVR+PR NMA R+  VDR GVY+  G    SKI+YI+MMQ     I + AG  LAKA TIA RYS +RRQGF   +               E QVLDYT+QMHRLLPLVA+AY FH AG  +  RL +LE         +    G G  L +FHA+SS LK LCS +TA GIEDCRK CGGHGYL +SGLPELLG YLQ+CTVEGENHMLTQQ V+ LL+ +AA    G  G DC ++SR
Sbjct:  175 WPGTLGRTANHAMVIAQLVIGDRRYGIHNFIVPLRDVKAHAPLRGVRAGDIGPKIGFTTMDNGYCVFDRVRVPRANMAARYASVDRHGVYTKKGG--DSKISYITMMQVR-AYIVEQAGYCLAKATTIAVRYSALRRQGFAPQAGXXXXXXXXXXXXSGELQVLDYTVQMHRLLPLVATAYAFHSAGRAMQQRLARLEA--------MLDTPGVGAALAEFHASSSGLKSLCSAVTADGIEDCRKCCGGHGYLAASGLPELLGTYLQNCTVEGENHMLTQQTVKHLLKAMAAG---GGGGEDCGHLSR 468
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A6H5K710_9PHAE (ACOX domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K710_9PHAE)

HSP 1 Score: 304 bits (778), Expect = 2.230e-98
Identity = 148/158 (93.67%), Postives = 152/158 (96.20%), Query Frame = 1 
Query:  433 KEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMSRLVHGEGKG 906
            ++  VLDYTIQMHRLLPL+ASAYGFHFAGVDL LRLR+LEREHVHGLPPLA EKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLG YLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMSRLV GEGKG
Sbjct:    4 RDRSVLDYTIQMHRLLPLIASAYGFHFAGVDLKLRLRRLEREHVHGLPPLAGEKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGTYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMSRLVRGEGKG 161
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A7S3Y646_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y646_HETAK)

HSP 1 Score: 283 bits (725), Expect = 1.320e-90
Identity = 152/286 (53.15%), Postives = 192/286 (67.13%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVIDGRQYGIHNFIVPIRGDD-HLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKESSKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFRE-----GSKKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAAR 840
            WPG +G+   HAMVIA+LV  G+ YGIHNFIVPIR  + H+PLPGV VGDIGPK+GF  +DNG+ + D+VR+PR  MAMR+Q VDR+G Y    S    K++ I+MMQ     I + +GR LAK  TIATRYS VRRQG+ E     G  +E  VLD+ +Q HRL PL+A+AY  HFAG DL  +   +      G P       AG    + HA SS LK LC+ +T  GIE+CRK+CGGHGYL +SG PEL G Y+Q+ TVEG+NH+L QQV++ LL+ L AAR
Sbjct:  104 WPGGLGKVGTHAMVIARLVTGGKDYGIHNFIVPIRDPETHMPLPGVEVGDIGPKMGFLAVDNGYLALDKVRVPRRYMAMRYQTVDRNGRYQRRPSPHE-KVSSIAMMQVR-ASIVRTSGRDLAKGVTIATRYSAVRRQGYDEDAGPLGGGQEKAVLDHALQRHRLFPLLAAAYAHHFAGEDLWGQFEAVREMVARGDP------AAGPAFAELHANSSGLKALCTEVTGHGIEECRKSCGGHGYLLASGFPELWGTYMQTNTVEGDNHLLAQQVLKYLLKALRAAR 381
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A7S4IAK9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IAK9_9STRA)

HSP 1 Score: 286 bits (733), Expect = 7.340e-90
Identity = 161/298 (54.03%), Postives = 199/298 (66.78%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVI-DGRQYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKESS-KIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFREGSKKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTL--KQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMS 879
            WPGT+GRTANHA+VIAQL+  DG+  G+HNFIVP+R   DH  LPGV  GDIGPKIGFN MDNGF  F+ V IPR NMAMR   VD  G YS     +++ K+AYI+MMQ     I  DAG+ LAKA T++ RYS VR+QGF E  ++E Q+LDY  Q HRLLPL+A+++ F + G  L  RLR +E   V G       KGA   +     HA+SS LK L + + A GIEDCRKACGGHG+L  SGL EL+  YLQ+ TVEG+NHML QQV++VLL+ + A +Q        VY S
Sbjct:    8 WPGTLGRTANHAVVIAQLMDGDGKNRGVHNFIVPLRSLKDHKTLPGVTTGDIGPKIGFNNMDNGFARFENVVIPRRNMAMRFATVDEHGKYSKKSVGDATEKVAYITMMQVR-AFIVNDAGKQLAKACTVSIRYSAVRKQGFDESGQRETQILDYRQQQHRLLPLLATSFCFFYTGRTLLQRLRDIEERLVTG-------KGAVTKIDVSDLHASSSALKSLTTMIAADGIEDCRKACGGHGFLHCSGLTELVTTYLQNPTVEGDNHMLPQQVIKVLLKLVMAVQQDAGKARK-VYAS 296
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A7S3LH98_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LH98_9STRA)

HSP 1 Score: 286 bits (733), Expect = 3.580e-88
Identity = 162/291 (55.67%), Postives = 194/291 (66.67%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVI-DGRQYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKES-SKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFREGSKKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVGND 864
            WPGT+GRTANHAMVIA+L+  DG   GIHNF+VP+R   DH  LPGV  GD+GPKIG+N MDNGF SFD V IPR NMAMR   VD  G Y       + SK+AYI+MMQ     I ++AG SL KA T+A RYS VRRQGF+E  + E QVLDY  Q HRL PL+AS+Y F F G  +  RL+ +E   +   P    E      +   HA+SS LK   + + A GIEDCRKACGGHGYLQSSGLPEL+  YL + TVEG+NHML QQVV+VLL+ + A     A G+D
Sbjct:  192 WPGTLGRTANHAMVIAKLIDGDGVDRGIHNFLVPLRSMKDHKLLPGVTTGDLGPKIGYNNMDNGFASFDNVVIPRRNMAMRFATVDEHGKYRKKSQDSAASKVAYITMMQVR-AYICENAGHSLGKACTVAIRYSAVRRQGFKEDGETEVQVLDYKQQQHRLFPLLASSYCFFFTGKKILERLKDIELRFLTEKPVTKAE------VTDIHASSSSLKSFTTTVAADGIEDCRKACGGHGYLQSSGLPELVTTYLMNPTVEGDNHMLPQQVVKVLLKLVQAV----ASGDD 471
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A7S2UKD5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKD5_9STRA)

HSP 1 Score: 281 bits (720), Expect = 7.350e-88
Identity = 156/280 (55.71%), Postives = 195/280 (69.64%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVID-GRQYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYS---SFGSKESSKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFREGS-KKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQ 822
            WPGT+GRTANHAM+IA+L+   G   G+HNF+V +R  DDH  LPGV  GDIGPKIG+N MDNGF  FD+V IPR NMAMR   VD+ G YS   S  +  +SK+AYI+MMQ     I  +AG++LA A T++ RYS VRRQGFR  S K+E Q++DY  Q HRL PL+A++Y F F G  +  +L+ LE   + G   + + + A       HA+SS LK   + +TA GIEDCRKACGGHG+LQSSGLPEL   YLQS TVEG+NHML QQVV+VLL+
Sbjct:   22 WPGTLGRTANHAMIIARLMDGAGVDRGMHNFLVQLRSMDDHTLLPGVLTGDIGPKIGYNNMDNGFAQFDQVLIPRRNMAMRFSHVDKQGTYSKNKSANTDATSKVAYITMMQVR-AHIVNEAGKNLALACTMSIRYSAVRRQGFRNDSDKQEIQIIDYRQQQHRLFPLLAASYCFFFTGRKILAQLKALEERMLSGSGTVTKAQVA-----DIHASSSALKSFTTTVTADGIEDCRKACGGHGFLQSSGLPELSLTYLQSPTVEGDNHMLPQQVVKVLLK 295
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A2K8DRF5_PROMN (Acyl-coenzyme A oxidase (Fragment) n=1 Tax=Prorocentrum minimum TaxID=39449 RepID=A0A2K8DRF5_PROMN)

HSP 1 Score: 281 bits (718), Expect = 4.260e-86
Identity = 151/288 (52.43%), Postives = 187/288 (64.93%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVIDGRQYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFGSKESSKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFRE-GSKKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAARQSGAVG 858
            WPG +GRTANHA+V A+L++DGR  GIHNF+V IR  + H PLPG+ VGDIGPKIG+N  DNGFC FDRVRIPR NMAM++  +   G Y++  ++   K+A  S M    V I   +G +L+ A TIA RYS VRRQGF   G   E  VLDY +Q HRLLPLVA++Y FH +G  +                       AGD ++  H  SS LK LCS +T+ GIE CRKACGGHGYL  SGLPELLGNY+Q+ TVEGEN ++ QQ  R LL++LA AR +   G
Sbjct:  194 WPGALGRTANHAIVYARLILDGRDIGIHNFMVQIRDLETHRPLPGITVGDIGPKIGYNNQDNGFCRFDRVRIPRTNMAMKYATLSPAGEYTTLPAR---KVASYSSMTHVRVTIVVSSGLALSAACTIAVRYSAVRRQGFTSRGDGSEECVLDYAMQQHRLLPLVATSYAFHVSGQAMQ-------------------RMAAGDDVEALHTASSGLKALCSRITSDGIEACRKACGGHGYLAVSGLPELLGNYIQNVTVEGENFVIAQQTTRGLLKQLARARAAALQG 459
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A1E7F3F0_9STRA (Acyl-coenzyme A oxidase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F3F0_9STRA)

HSP 1 Score: 280 bits (717), Expect = 8.100e-86
Identity = 155/283 (54.77%), Postives = 193/283 (68.20%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVI-DGRQYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSS-FGSKESSKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFREGSKKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAAR 840
            WPGT+GRTANHAMVIAQL+  DG   GIHNF+V +R  +DH  LPGV+ GDIGPKIG+NTMDNGF  F  V IPR NMAMR   VD++G YS    S  +SK+AYI+MMQ   +++   A ++LA A  +  RYS VR+QGF E  K E QVLDYT Q HR+ PL+A++Y   F G  L   L+ LE E +    P+ +E+     +   HA SS LK   + + A GIE+CRKACGGHG+L SSGLPEL   YLQS TVEG+NHML QQV+RVLL+ + A +
Sbjct:  190 WPGTLGRTANHAMVIAQLIDGDGIHRGIHNFLVQLRSMEDHTLLPGVKTGDIGPKIGYNTMDNGFAYFKNVMIPRRNMAMRFASVDKNGRYSKKVMSDAASKVAYITMMQVRSIIVV-GASKALAMACAVTIRYSAVRKQGFDEDGKSEMQVLDYTQQQHRIFPLLAASYCIFFTGRQLAKDLKALE-EKLIAAKPVTKEE-----VSDVHAASSALKSFSTMIAADGIEECRKACGGHGFLSSSGLPELFTTYLQSPTVEGDNHMLPQQVIRVLLKLVHAVQ 465
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BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Match: A0A7S3DPW3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPW3_9STRA)

HSP 1 Score: 276 bits (705), Expect = 1.220e-85
Identity = 155/284 (54.58%), Postives = 188/284 (66.20%), Query Frame = 1 
Query:    1 WPGTMGRTANHAMVIAQLVIDGR--QYGIHNFIVPIRG-DDHLPLPGVRVGDIGPKIGFNTMDNGFCSFDRVRIPRGNMAMRHQRVDRDGVYSSFG-SKESSKIAYISMMQAS*VVIAKDAGRSLAKAATIATRYSIVRRQGFREGSKKEHQVLDYTIQMHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLKQFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSCTVEGENHMLTQQVVRVLLQELAAAR 840
            WPGT+GRTANHAMVIA L IDG+    GIHNF+VP+R   DH  LPGV  GDIGPKIG+N MDNGF  F++V IPR NMAMR   VD  G Y     S  S+K+AYI+MMQ     I  +A ++L  A TIA RYS VR QGF+E  K EHQ+LDY  Q HRL P +A++Y F F G  L   L+ +E   V+G P    E      +   HA+SS LK   + + A G+EDCRKACGGHG+LQSSG PEL+  YLQS TVEG+N ML QQ V+VLL+ + A +
Sbjct:   31 WPGTLGRTANHAMVIANL-IDGQGVNRGIHNFLVPLRSMKDHKLLPGVTTGDIGPKIGYNVMDNGFAKFEKVEIPRRNMAMRFVSVDEQGNYKKKTVSDASAKVAYITMMQVR-AYICNEASKNLGLACTIAIRYSAVRLQGFKEDGKTEHQILDYKQQQHRLFPRLAASYCFFFTGRKLLATLKDVESRLVNGKPVTKTE------VTDLHASSSGLKSYTTTIAADGMEDCRKACGGHGFLQSSGFPELITTYLQSPTVEGDNQMLPQQAVKVLLKLVQAVQ 306
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6086.16744.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNK8_ECTSI3.830e-20495.70Acyl-CoA oxidase (Partial) (Fragment) n=1 Tax=Ecto... [more]
A0A835YNL1_9STRA1.380e-10860.39Acyl-coenzyme A oxidase n=1 Tax=Tribonema minus Ta... [more]
A0A6H5K710_9PHAE2.230e-9893.67ACOX domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S3Y646_HETAK1.320e-9053.15Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S4IAK9_9STRA7.340e-9054.03Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S3LH98_9STRA3.580e-8855.67Acyl-coenzyme A oxidase n=1 Tax=Amphora coffeiform... [more]
A0A7S2UKD5_9STRA7.350e-8855.71Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A2K8DRF5_PROMN4.260e-8652.43Acyl-coenzyme A oxidase (Fragment) n=1 Tax=Proroce... [more]
A0A1E7F3F0_9STRA8.100e-8654.77Acyl-coenzyme A oxidase n=1 Tax=Fragilariopsis cyl... [more]
A0A7S3DPW3_9STRA1.220e-8554.58Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6086contigEcto-sp13_S_contig6086:941..8444 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score289.7
Seed ortholog evalue7.9e-76
Seed eggNOG ortholog2880.D8LNK8
Model size909
KEGG rclassRC00052,RC00076
KEGG koko:K00232
KEGG ReactionR01175,R01279,R03777,R03857,R03990,R04751,R04754,R07888,R07892,R07896,R07934,R07950
KEGG Pathwayko00071,ko00592,ko01040,ko01100,ko01110,ko01212,ko03320,ko04024,ko04146,map00071,map00592,map01040,map01100,map01110,map01212,map03320,map04024,map04146
KEGG ModuleM00087,M00113
Hectar predicted targeting categoryother localisation
Exons7
EggNOG free text desc.acyl-CoA oxidase activity
EggNOG OGsCOG1960@1,KOG0136@2759
EC1.3.3.6
Cds size444
COG Functional cat.I
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6086.16744.1prot_Ecto-sp13_S_contig6086.16744.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6086 6675..8444 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463847.8866282-UTR-Ecto-sp13_S_contig6086:940..9791681463847.8866282-UTR-Ecto-sp13_S_contig6086:940..979Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6086 941..979 +
1681463847.8976133-UTR-Ecto-sp13_S_contig6086:1525..16231681463847.8976133-UTR-Ecto-sp13_S_contig6086:1525..1623Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6086 1526..1623 +
1681463847.906412-UTR-Ecto-sp13_S_contig6086:3093..32851681463847.906412-UTR-Ecto-sp13_S_contig6086:3093..3285Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6086 3094..3285 +
1681463847.915155-UTR-Ecto-sp13_S_contig6086:3992..41071681463847.915155-UTR-Ecto-sp13_S_contig6086:3992..4107Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6086 3993..4107 +
1681463847.9238322-UTR-Ecto-sp13_S_contig6086:6653..66741681463847.9238322-UTR-Ecto-sp13_S_contig6086:6653..6674Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6086 6654..6674 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463847.9325724-CDS-Ecto-sp13_S_contig6086:6674..67771681463847.9325724-CDS-Ecto-sp13_S_contig6086:6674..6777Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6086 6675..6777 +
1681463847.9411812-CDS-Ecto-sp13_S_contig6086:7399..76321681463847.9411812-CDS-Ecto-sp13_S_contig6086:7399..7632Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6086 7400..7632 +
1681463847.9499342-CDS-Ecto-sp13_S_contig6086:8336..84441681463847.9499342-CDS-Ecto-sp13_S_contig6086:8336..8444Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6086 8337..8444 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6086.16744.1

>prot_Ecto-sp13_S_contig6086.16744.1 ID=prot_Ecto-sp13_S_contig6086.16744.1|Name=mRNA_Ecto-sp13_S_contig6086.16744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=148bp
MHRLLPLVASAYGFHFAGVDLNLRLRKLEREHVHGLPPLAREKGAGDTLK
QFHATSSCLKGLCSGLTAAGIEDCRKACGGHGYLQSSGLPELLGNYLQSC
TVEGENHMLTQQVVRVLLQELAAARQSGAVGNDCVYMSRLVHGEGKG*
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mRNA from alignment at Ecto-sp13_S_contig6086:941..8444+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6086.16744.1 ID=mRNA_Ecto-sp13_S_contig6086.16744.1|Name=mRNA_Ecto-sp13_S_contig6086.16744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7504bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6086:941..8444+ (Ectocarpus species13 EcNAP12_S_4_19m)
TGGCCTGGGACCATGGGTCGCACGGCGAACCATGCAATGGTGAGAGTAGT
AAGTAGTACACGGCAGTAGCGTGAGATCGATGCAGTGTTTGCGTCGTGCT
TGGCTACCGAGACAGACAAGTGTTGGAATAGGTTACACCCATCATGAAGG
GAGTGTGCTAGAAAAATGAAGAAAAAAAGTGGGTGGTTTGTTTAGTTTCG
TATAGGTTTGAGTTTTAGGTCATAGGGAAGCGTTTGACGTCAGCATGTTA
CCGGCTTTGGTTACAGTAGCAGGGTTAAAGATGAAGCATATGTTTTATTG
TATGCATAGGATTCTTGACGGAGCACGTGATTCTACACCAGTGTCGTCAA
GTTCTGAAGCAGTAAACTTTTTTTTTAGCCTGATTTTCTGAAGTCCCGCC
CAGGTCCTGCGGGAGACTACCGTATCCCGCAGTCGCAGTCATGTACCCAT
CTTTTTGCGTCTTTTGGACCTGTGGTAGCCTACATGCCGCAGACGCAGTC
ACGCACCCGTAGCTGCGTCTTCTCTCTCTCTCTCAACCGGTGTAGCGCGT
CCGTCGACGACAGCCCATCGTTTACCCTGCCATAGGTGATCGCACAGCTG
GTGATCGACGGCAGGCAGTACGGCATCCACAACTTCATCGTGCCCATCCG
GGGTGACGACCACCTCCCGCTGCCTGGTGTCAGGTGAGAGGGTGTCCGTC
CGACCTGGCTGACGACGCGGGCCCCCTTGTAAGGGGATACTGCCGTTGTA
TTTCAGGAGAAAGAAAGGGTAGATTCGTTTGTGGTCAACCTGCTTCATAG
GACGTTCCTTTGTTGGCAATTTCGTTCCGAAATCTGGATTCGTGTCATAT
CCGAGAATAGCTACCAGTGGGGGGAGCCGTGTAGAACAGTGCCGACGTAG
CGGTGGGCCCCGTTTAGCGACAACTATTACGTTATAGCGTCAGGAGGGAA
CATGGTCGCTATTCAGGGCAGGTCGCTTTAGCGGCTGTTTGCCGGGGTGT
AGTTCTACCAGCCACGCGATTTTTTGGTCGCTAAACAGGGCATGTCGCTG
AACGGGGGGTCGCAAAACCCGGCCCACCACAATGTACCCGGCCCACCACC
ACTGCGGTACCGCTGTTATGGGCGGGGGCAGACTGAATAACGCCTGTCGA
TTCGCCGGGCACATTCCGGCACTACTGGGGGGGTCGTACTGACACCCACG
AGGAAAAGCATGCGGGAAAACGCTGTCGTCATGATCGTCGCTGTTGCGCT
TAGAATGCACCAAGGTGGGGACTGTGGCGCTATCGACTTTTCCAACGCTG
ACGGTATCGTGACGCCATCAATATATGGCACACCCGTACATGGGTGACGT
CGGGACTCCGTCAGCATGGCCATCTTGTCCCGCCCGTCGAGATGGCATCA
TGATTCCTACGTCAGTGGGACATCCTCGCAAGGCATACCCGTGACTTGAT
GAGCATGACCATCTTGTGACACTCGTCAACATGACACCCTATTAGTGGTT
CCGTCAGCAGGACGCCCTCATATGATGTGTTTCTCATTGCTACAAGATCA
TGTCTCAATCATGACAGTGTCGCTGTCATTTCGTCAGTAAGACATAACCG
AGATGTTGTGTTGAATGTTCTCGGAGGTTGCCTGCTCCTGCTGCAGAGAG
AGGCCCAAGGTCTCCACTTAACCCACAGCAGCCCTGTACGGATCCTAAAA
CGCAACGAATCGCATCCGCATAGCAGCCGCAAGAGACAGACCTACCGCCC
CGCAAAGAGTTCACTGGTACAGCCGATGTACCACCTGTCGGGGACGGAAT
TACCGTACCGTGAGGCTCCTTCCGTGCCGCTTGATATCAGCCACTTGTGT
TGATCGATGCTCTCCTGTGGCCTACCACCCTCCGACCGATTGGCCATCCG
TCCTGTCGGAATTCCGCCCTTGAGGACGCGTGGCCGATGGTCTAATCGCT
AAGGCGTGCAAAACACGAGTACGCCCCCTTCTTAGATAGGCTAGGGGAAA
ACATTTTTGAGACACCTTTGGCGAAGTAGGATTGAACTATTGGCCATCGG
TGATCCTGTGGAATGCTCCGTCCCTTGAAGGACGTGGTCAATGGTCTCGC
CGCTAAGGCATGCAAAACATCAAGTAGTACGCCCCCCCCCCCTTCAATCC
CAGAGTTGGAGACATCGGCCCGAAGATTGGTTTTAACACCATGGACAACG
GCTTCTGCTCCTTCGACCGGGTGAGGATCCCCCGCGGCAACATGGCCATG
AGGCATCAGCGGGTGGACAGAGACGGCGTGTACTCTTCCTTTGGTTCGAA
GGAGAGCAGCAAGATCGCCTACATCTCCATGATGCAGGCGAGCTAGTTCC
CTTGTTTGTTTACGGTGCTGAAACGAATGAACGTCTCCTTTTAGTGTAGG
AGGAGAGGCAGGTTTCGTAGAATCCTTGCTTGCGTTGAAACCTAGAGTTG
CTACACGGAGCCCCCCCCCCCCCCCCCCTGTAAATTACCACGTGTGGGCC
AGCCTGTGTTCAGCTCTCGGCAGTGTTGCAAGGTCCCGTCGTTGCTGACT
GAGGCTAGCCTCTCGATGGTTAGGCCTAGTGCCCCTTTTTTTTCGACGGG
GCGGATACCCAACGAGAGTCAAGGCTTTGCCTTGAACGGTATGCAGGAAT
GAAAGAGGAGATGGTCGGCCGATGCTGGTACGGTTTCTGACGTGAAGACA
AGACCACCACCGTGACAACGAACCGTAGCAACAACACCAGGAACAACAAG
AACATCGACGTTGTAGCACCACCAGCTCCAATAGTCATGCCGACAACAGC
AACTGCAACATCGACAGCAACACCAACCACCGCCACCATCGCCGCCAACC
ATCACATGAACAACAACCATACCATTCAACAACACCGGCATATACCAACA
GCAACATCAATACCAACCAACACACCAGCAACAACAACACCCACCACCAC
CAGCAGCAACCCGCCGCCTCTCTCGGCATGTGTGTATCGTGACATGACAT
GACATGACATGACATGACATGATGATTTGACGGGATGAATAAATCAGGTA
AGGGTGGTGATCGCCAAGGACGCGGGCAGGAGCCTCGCCAAGGCAGCGAC
CATCGCAACTCGCTACTCTATCGTCCGAAGGCAGGGATTCCGTGAGGGAA
GCAAAAAGGAGCACCAGGTACGCCGTGCGTGTGACGCTGAGTATCACCCC
CCCGGTGTGCCCCCCTTGCGGCAATGGTACCGTCTACAGCTCGAATTTTC
CCGTGTGACAGCGTGTTGCAAGAAGTAGTACCAGGGATGCCGTGTACGTG
TGTGACGCCCGGTCCCACTCACCCACCCCCCGGCGGTATTTCTACTATCT
ACAGCTAGATTTTTCCCTCGATGACTGCCTTTTTCATCGAGCAGGCGGGC
TTAAAAAAATAGGAGCACTAGGTACGTGCCTTTAGCTCGAAGTAGAAAGC
GGGCGAGGACGTCAGGTGTTCATGTTCGCCCAGTGTACAGCTGGCCCGCG
ACCGAATGGGGGCAACATGTCGAACCGTGTACAGCTACGTCGCGCAGCAC
AACAGCGCGTTTGCTCCTTTGGGGCGTGCAGCAGCAGCCGGGCAGCAGCG
GGCCCAAGCTTGTAGTTTTCCTCCTTGTTCCGGTAGCCTTCGCGAGGATA
TCCTTTGATCCTCTCGAAAGCGGTCGCTTTAGTGGTCACCGCGCGTGCGT
GCCTGCAGACGGCGAAATTTCCTCCAAGCTGTCTGGACGTTGGAACAATG
AGAGCGAGGCGCGGTGGGTGATGCGTGATGCGATTTCATCACCCTTCCGC
GCCTCGCTCCCCCTGATCCGTTGTCTGGACAGCTTGGAGGTACGTTTCGC
CGTCTGCAGGCACGCACGCTCTGTGGGCAGTCAGGCTACAAGCTCGGGTT
CCACCGCCCCGCCTTCTGTTGCGTTTAGAAGCCGAAACCAAACCATTAGA
CGAAGTCAGCGATGACTAGTTGTCTTTTTGTTTGGTTCCGGCTCCTAAAC
GTCACGCCCCAAAGGAACAATCGTGCTGTGCGATGCTGGATGCTGTGCTG
CGCGAGGTACACACGCGATGCGGATCTCGACGGGAGGGCGGCTGGTACCC
GCAACCCCGAGCTTACCCCATCCATGCAAGCGGGAGGGTTCTCACCCCCA
ACGCTTGCCCTATGCTTTTTAGTCGAGAACGGTTAGAAGGCGGGCGAGAA
TGTGAAGTGCCCTTGTTCGCCGAGTGTGATGCTGGCCCGGGGGACAAGGC
GGGGCTACCTGCCGAATCGCGTACAAGCACCTCGCATCAGCACAGCGGCG
CGTTTGTGTTTCCCCTGGGGCGTGGAGCACCAGCAGCCCGAGCACCAGCA
GCGGCGGACCCGAGCTCGAATATTTCCCATCTTGGTCGCCGCCGCCGCGC
GTGCATGCCCGCAAACGGCGAAGTTTACTTCCAGGCTGTCTGGGCGTTGG
AGCAATCATAGCGAGGCACGAGTAATGTATCAACTTACCTCCCAAGCTGG
TCTGGACGTTGGAACATATCGGAGCGAGGGACGGCGGGTGATGCGATACA
TCATTCTTCTTGTCTCGCTCTGACTGTTCCGATGTGTTGGACAGCTTGGA
GGTGTCTTTGTACGTCACCCTTCGTGCCTCGCTCTTATTGCTCGCATGTT
TGGACAGCTTGGGAGATAAGTTTCACCGTGTGCAGGCACCTGCGCGGGGC
GGCGACGAGGGAGGTGGTGAAGCTTCAAGCTCCGGTTCCGCCGCCTCGGC
TGCTGCTACATTTAGAAGCCGAAATCAAACCATTAAACGAGTCAGCGCTA
GATGGTTTGATGTCGGTTTCTATAAGCACACGCCCCAGAGGAACAGACTT
GCTGTGCTGTGCGAGGCCCACACGCGATGCGGATTTCGACAGGTACCGGC
AACCCCGAGCTGCTGACCCATGCAGGCGGGGGAGGTTCCACACGGGAGCA
GAGAGCGGAAAACCGCCGTCCGTTGCGCTGTTCGCGTCTCGGGGGGTGTC
GAGGTAGGCGGAGGGCCTGGTCTTCGCTGCCGGCCATGGTGATTGGACGG
GACTGTGCCGTGCGGACCCCGGGCCCCTCGCGCTGCCGGCGATCGACGAT
TGGGTGGGACTGTGCCGTGCGGACCCCGGGCTCCTCGCGCTGCCAGTGAT
GAATTATTGGATGGGACTGTTCCGTGCGTACCCTGGGTTCCTCTCGCTGG
TGGCGTCTGGGACGCCGGCGTCGAGCATATTGTCGGGGACCTGATATATT
TTTAGAAAGTAGCGTATCTTTCGAAGAAAGACTAAATACCCGATAGGCAA
CTCTGTTTAGCTCTCTTCGTAACTTTTTTGGGGAGCGACGAGAGAATGAC
TTCAGCAGTTTACAAATATTTTCCCAGTGACTTGGGAGGGCGGGGGGGGC
GCCGTTGGTACATCTTCCGTACCGGAACCGTTTCCTTCTGATTGGCTCCC
CGTTGTGCTACAAGGCAGTTGCTGTGAAAGTAGGCCACTCCAAGGCGGTA
AAATACCTCGAAGGGCTAGTCTTTCTAATGTCACGTATATTTTTCAGCTG
ATACTTGTAGGTGGCAGGTGGTGGACTCACCGTTCGTTCTTCCGGCTTGC
CCATGTAATGACCTATGCTCGACGGTGGTAAAAACTCGCACTAGATCCCA
AATGGACGTTTTTTATTTGCGGGCCGCAACTGCTGTATATGCGCTTCTCG
TGTGCTGTGTCAGGTCCTTGACTACACCATCCAGATGCACCGCCTCTTGC
CCCTGGTAGCTTCAGCGTACGGGTTCCATTTCGCCGGCGTGGATCTGAAC
CTACGCCTTCGGAAACTGGAGAGAGAGCACGTCCACGGTAAGCTTGCTGC
AGACTGTCCTTGCCGTGAAGCGGCGTTCGTTCTGCACGACTGTTTCGTGC
CATCCCGAACGAATCGTCTTGGGAAACAACAGGAAGGCAATGGGCCCACC
TTTGGAAGACATATTTCAACGACAGAAAGAAGACATACAATACCACAGTC
GAAGGAGATGTGTTGAAGGTCTTTGCCGTGCGTGGGAGAAAATTGGGGGA
AGCTCGGGATTCTGAGCGAGAAAGTTTTTACGGTAGTACTGGCTACCTGC
GTTGTTTTGGTTGTGCAAGGGGGCAAGTACATGTCTCTCACCGTGCTCAC
GACAACACTGAATCTTGTTCTCAGCTTTATCGTTGGAGGCGTATCGTGGT
GTTTCGGGGTCACGTTCTCACAGCAGCACCGAAATCCGCTTCTCAAACAC
GTGATAAAGTTGGAAGTACAACATTCTGGGGTGTAGTGTCAAGTAACGTG
CTCTTTCCCCGCCCTCTCACAGCAGCCCCGAATCTGCCTCTCATCACTGC
TATCGGAAGTGTGCGACTGTTTCGGGCCAAGCAACGCTCTCTCTCCCCAC
CCTCTCACCGCAGCAGCGGACCGACCTTTTCAGTCTCACCCGAACCCCCG
CCGCCACAGGCCTTCCCCCGCTGGCAAGGGAGAAGGGGGCCGGCGACACG
CTCAAGCAGTTCCACGCCACCAGCTCTTGCCTGAAGGGCTTGTGCTCCGG
GCTCACCGCCGCCGGCATCGAGGACTGCCGCAAGGCCTGTGGGGGGCACG
GGTACCTGCAGAGCTCCGGCCTGCCCGAGCTTCTGGGGAACTACCTGCAG
TCGTGCACCGTGGAGGGGGAGAACCACATGCTAACGCAGCAGGTTTGTTC
GTGGGCTCTTTATTATAAGTGGAAACGCCTCTTTCGTTCGTGACGCCCCC
TTCCTCCCCTGCCCCCCCGGATGGTGCGGTGTGCCCCTCCACATGACGAC
GCAGCAGTTTTTTTGTGGGCTCTCTCAAAAGTGGAAACGCCTCTTTCGTT
CATGACGCCCCCTTCCTCCCCTTCCCCCCCCTCGGATGGTGCGGTGCCCC
TCCCCCGTGTGCCTTTGTTTGTTGTCGCGCGCCCTCCTGGTCTCTTACTG
TACCACGTTGTAGCGTAAGAATCAACCACCACCGCCATAAGAAAACCAAC
ACCAGAATATACCAACTATGACAACAACAAAAACAACAACAATGAGACTG
GCGCGCGCGGTTTCTCCGCGGCGCGCGCCTTCGAAGAGCCGAAGCATTTG
TTATGTTGACCTTTTTCATGAAGCCACACACCACACGCCCACCGTTGGCC
GCTTTTCTTGCGATCATAGCGCGGAGACCTGGTCGACGGCAGCAGCGAGC
GTGCTTTGCATTTTTTGTTCAGTGCGTGTATTTATTGTAGTCCACGAATA
GGATCGAAACCCCTTTTCCCAGGCCCCAAGCCAAGACCACAGAGTTCGCC
GTTATACACAGCCTTACGTTCCAGGGATATTAGACGCCACTTCTTGGTAC
GTTTATTATTCTATCGTTCCCGGCGCGCGGCTGTTTCCGGTGGTAGGTGG
TGCGCGTTTTGCTCCAAGAGCTAGCCGCCGCTCGACAATCCGGAGCTGTC
GGGAACGACTGCGTCTACATGTCGCGCCTTGTTCACGGAGAAGGGAAGGG
GTAA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6086:941..8444+

>mRNA_Ecto-sp13_S_contig6086.16744.1 ID=mRNA_Ecto-sp13_S_contig6086.16744.1|Name=mRNA_Ecto-sp13_S_contig6086.16744.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=444bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6086:941..8444+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCACCGCCTCTTGCCCCTGGTAGCTTCAGCGTACGGGTTCCATTTCGC
CGGCGTGGATCTGAACCTACGCCTTCGGAAACTGGAGAGAGAGCACGTCC
ACGGCCTTCCCCCGCTGGCAAGGGAGAAGGGGGCCGGCGACACGCTCAAG
CAGTTCCACGCCACCAGCTCTTGCCTGAAGGGCTTGTGCTCCGGGCTCAC
CGCCGCCGGCATCGAGGACTGCCGCAAGGCCTGTGGGGGGCACGGGTACC
TGCAGAGCTCCGGCCTGCCCGAGCTTCTGGGGAACTACCTGCAGTCGTGC
ACCGTGGAGGGGGAGAACCACATGCTAACGCAGCAGGTGGTGCGCGTTTT
GCTCCAAGAGCTAGCCGCCGCTCGACAATCCGGAGCTGTCGGGAACGACT
GCGTCTACATGTCGCGCCTTGTTCACGGAGAAGGGAAGGGGTAA
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