mRNA_Ecto-sp13_S_contig60810.16740.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig60810.16740.1
Unique NamemRNA_Ecto-sp13_S_contig60810.16740.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: D8LIN7_ECTSI (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIN7_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 2.480e-56
Identity = 96/97 (98.97%), Postives = 96/97 (98.97%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGV VWLRPYDIVALSADTGLVEAVPDTISLDALRR
Sbjct:  996 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVRVWLRPYDIVALSADTGLVEAVPDTISLDALRR 1092
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A6H5K515_9PHAE (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K515_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 8.570e-56
Identity = 95/97 (97.94%), Postives = 95/97 (97.94%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGV  WLRPYDIVALSADTGLVEAVPDTISLDALRR
Sbjct:  990 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVRAWLRPYDIVALSADTGLVEAVPDTISLDALRR 1086
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A7S2XY05_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XY05_9STRA)

HSP 1 Score: 122 bits (305), Expect = 7.460e-34
Identity = 58/97 (59.79%), Postives = 72/97 (74.23%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            Q QV+F E W  K  R+R  S  +  PGWRLLPVIVK+NDDLRQEQL +QL+F    I +  G+ +WLRPYDI+A S D+GLVEA+PDT+SL AL+R
Sbjct:    8 QTQVIFRESWVAKEARLRSQSSHSHLPGWRLLPVIVKANDDLRQEQLIAQLIFEFDSIFQDAGLHLWLRPYDILATSKDSGLVEAIPDTVSLHALKR 104
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A2D4BTD9_PYTIN (Phosphatidylinositol 3 and 4-kinase-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTD9_PYTIN)

HSP 1 Score: 126 bits (316), Expect = 1.170e-31
Identity = 57/97 (58.76%), Postives = 75/97 (77.32%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            +P ++F E W DK +RIR+ SP+ + PGWRLLPVIVKSNDDLRQEQ A+QL+    RI RA  + + LRPY+++A S   GL+EAVPDT+SLD+L+R
Sbjct:  857 KPIIVFRERWSDKEDRIRKTSPFGDHPGWRLLPVIVKSNDDLRQEQFAAQLIAQCDRIFRAYSLPLRLRPYNVIATSPTAGLIEAVPDTVSLDSLKR 953
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A0P1B261_PLAHL (Phosphatidylinositol kinase (PIK-K) n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B261_PLAHL)

HSP 1 Score: 126 bits (316), Expect = 1.170e-31
Identity = 59/96 (61.46%), Postives = 74/96 (77.08%), Query Frame = 1 
Query:    4 PQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            P+V+F E W DK  RIRR SP+ + PGWRLL VIVKSNDDLRQEQ A+QL+    RI R   + + LRPY+++A SA TGL+EAVPDT+SLD+L+R
Sbjct:  899 PKVVFREYWQDKEARIRRDSPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPLSLRPYNVIATSAKTGLIEAVPDTVSLDSLKR 994
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A484DZK7_BRELC (PI3K/PI4K catalytic domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DZK7_BRELC)

HSP 1 Score: 124 bits (311), Expect = 5.530e-31
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            +P ++F E W +K  RIRR SP+ + PGWRLL VIVKSNDDLRQEQ A+QL+    RI R   + + LRPY+++A SA TGL+EAVPDT+SLD+L+R
Sbjct:  957 KPMIVFREHWSEKEERIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPLSLRPYNVIATSAKTGLIEAVPDTVSLDSLKR 1053
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A3R7JFU2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JFU2_9STRA)

HSP 1 Score: 124 bits (310), Expect = 7.470e-31
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            +P ++F E W +K  RIRR SP+ + PGWRLL VIVKSNDDLRQEQ A+QL+    RI R   + + LRPY+++A SA TGL+EAVPDT+SLD+L+R
Sbjct:  657 KPMIVFRERWSEKEARIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPLALRPYNVIATSAKTGLIEAVPDTVSLDSLKR 753
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A3F2RT18_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RT18_9STRA)

HSP 1 Score: 124 bits (310), Expect = 7.470e-31
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            +P ++F E W +K  RIRR SP+ + PGWRLL VIVKSNDDLRQEQ A+QL+    RI R   + + LRPY+++A SA TGL+EAVPDT+SLD+L+R
Sbjct:  660 KPMIVFRERWSEKEARIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPLALRPYNVIATSAKTGLIEAVPDTVSLDSLKR 756
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BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A3R7IGB5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7IGB5_9STRA)

HSP 1 Score: 124 bits (310), Expect = 7.530e-31
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            +P ++F E W +K  RIRR SP+ + PGWRLL VIVKSNDDLRQEQ A+QL+    RI R   + + LRPY+++A SA TGL+EAVPDT+SLD+L+R
Sbjct:  908 KPMIVFRERWSEKEARIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPLALRPYNVIATSAKTGLIEAVPDTVSLDSLKR 1004
[Close]
BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Match: A0A329RLS3_9STRA (PI3K/PI4K catalytic domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RLS3_9STRA)

HSP 1 Score: 124 bits (310), Expect = 7.550e-31
Identity = 57/97 (58.76%), Postives = 74/97 (76.29%), Query Frame = 1 
Query:    1 QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQLLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR 291
            +P ++F E W +K  RIRR SP+ + PGWRLL VIVKSNDDLRQEQ A+QL+    RI R   + + LRPY+++A SA TGL+EAVPDT+SLD+L+R
Sbjct: 1017 KPMIVFRERWSEKEARIRRESPFGDHPGWRLLSVIVKSNDDLRQEQFAAQLIAQCDRIFREYSLPLSLRPYNVIATSAKTGLIEAVPDTVSLDSLKR 1113
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60810.16740.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIN7_ECTSI2.480e-5698.97PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A6H5K515_9PHAE8.570e-5697.94PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A7S2XY05_9STRA7.460e-3459.79Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A2D4BTD9_PYTIN1.170e-3158.76Phosphatidylinositol 3 and 4-kinase-like protein n... [more]
A0A0P1B261_PLAHL1.170e-3161.46Phosphatidylinositol kinase (PIK-K) n=1 Tax=Plasmo... [more]
A0A484DZK7_BRELC5.530e-3158.76PI3K/PI4K catalytic domain-containing protein n=1 ... [more]
A0A3R7JFU2_9STRA7.470e-3158.76Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A3F2RT18_9STRA7.470e-3158.76Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A3R7IGB5_9STRA7.530e-3158.76Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A329RLS3_9STRA7.550e-3158.76PI3K/PI4K catalytic domain-containing protein n=2 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60810contigEcto-sp13_S_contig60810:529..819 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score196.4
Seed ortholog evalue6e-48
Seed eggNOG ortholog2880.D8LIN7
Preferred namePI4KB
Model size291
KEGG rclassRC00002,RC00078
KEGG koko:K19801
KEGG ReactionR03361
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
KEGG ModuleM00130
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0000212,GO:0000226,GO:0000280,GO:0000910,GO:0000916,GO:0003674,GO:0003824,GO:0004430,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005768,GO:0005794,GO:0005802,GO:0005829,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006661,GO:0006793,GO:0006796,GO:0006810,GO:0006897,GO:0006898,GO:0006996,GO:0007010,GO:0007017,GO:0007030,GO:0007049,GO:0007051,GO:0007110,GO:0007111,GO:0007112,GO:0007140,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007283,GO:0007423,GO:0007568,GO:0008150,GO:0008152,GO:0008340,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0010256,GO:0010259,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0019953,GO:0022402,GO:0022412,GO:0022414,GO:0022603,GO:0023052,GO:0030029,GO:0030036,GO:0030258,GO:0030725,GO:0030726,GO:0030865,GO:0030866,GO:0031032,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032501,GO:0032502,GO:0032504,GO:0032506,GO:0033206,GO:0035295,GO:0035556,GO:0036213,GO:0042710,GO:0043062,GO:0043063,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043583,GO:0044010,GO:0044011,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044764,GO:0044837,GO:0045017,GO:0046474,GO:0046486,GO:0046488,GO:0046834,GO:0046854,GO:0048015,GO:0048017,GO:0048137,GO:0048232,GO:0048285,GO:0048471,GO:0048513,GO:0048609,GO:0048731,GO:0048839,GO:0048856,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051239,GO:0051301,GO:0051321,GO:0051703,GO:0051704,GO:0051716,GO:0052742,GO:0060872,GO:0061640,GO:0061982,GO:0061983,GO:0065007,GO:0071704,GO:0071840,GO:0071889,GO:0071944,GO:0090175,GO:0090407,GO:0090605,GO:0090609,GO:0097708,GO:0098588,GO:0098657,GO:0098791,GO:0140013,GO:1901576,GO:1903046,GO:1905330,GO:2000026,GO:2000027
Exons1
EggNOG free text desc.phosphatidylinositol kinase activity
EggNOG OGsCOG5032@1,KOG0903@2759
EC2.7.1.67
Cds size291
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463847.6675217-CDS-Ecto-sp13_S_contig60810:528..8191681463847.6675217-CDS-Ecto-sp13_S_contig60810:528..819Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig60810 529..819 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60810.16740.1prot_Ecto-sp13_S_contig60810.16740.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig60810 529..819 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig60810.16740.1

>prot_Ecto-sp13_S_contig60810.16740.1 ID=prot_Ecto-sp13_S_contig60810.16740.1|Name=mRNA_Ecto-sp13_S_contig60810.16740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=97bp
QPQVLFNELWHDKSNRIRRVSPWAEEPGWRLLPVIVKSNDDLRQEQLASQ
LLFVMQRILRAEGVGVWLRPYDIVALSADTGLVEAVPDTISLDALRR
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mRNA from alignment at Ecto-sp13_S_contig60810:529..819-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig60810.16740.1 ID=mRNA_Ecto-sp13_S_contig60810.16740.1|Name=mRNA_Ecto-sp13_S_contig60810.16740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=291bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60810:529..819- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCCCAGGTGCTGTTCAACGAGCTGTGGCACGACAAGAGCAACCGGAT
ACGTAGGGTCTCGCCGTGGGCCGAGGAGCCAGGGTGGCGGCTCCTCCCGG
TCATCGTTAAGAGCAACGATGACCTGCGCCAGGAGCAGCTGGCCTCCCAG
CTCCTATTCGTCATGCAGCGCATCCTTCGGGCGGAAGGGGTCGGGGTGTG
GCTGCGCCCGTACGACATCGTGGCCCTGTCCGCGGACACGGGGCTGGTGG
AGGCCGTTCCGGACACGATATCGCTGGATGCACTGCGGAGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig60810:529..819-

>mRNA_Ecto-sp13_S_contig60810.16740.1 ID=mRNA_Ecto-sp13_S_contig60810.16740.1|Name=mRNA_Ecto-sp13_S_contig60810.16740.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=291bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60810:529..819- (Ectocarpus species13 EcNAP12_S_4_19m)
CAGCCCCAGGTGCTGTTCAACGAGCTGTGGCACGACAAGAGCAACCGGAT
ACGTAGGGTCTCGCCGTGGGCCGAGGAGCCAGGGTGGCGGCTCCTCCCGG
TCATCGTTAAGAGCAACGATGACCTGCGCCAGGAGCAGCTGGCCTCCCAG
CTCCTATTCGTCATGCAGCGCATCCTTCGGGCGGAAGGGGTCGGGGTGTG
GCTGCGCCCGTACGACATCGTGGCCCTGTCCGCGGACACGGGGCTGGTGG
AGGCCGTTCCGGACACGATATCGCTGGATGCACTGCGGAGG
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