mRNA_Ecto-sp13_S_contig6079.16733.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: D8LD99_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD99_ECTSI) HSP 1 Score: 667 bits (1721), Expect = 1.090e-238 Identity = 338/373 (90.62%), Postives = 346/373 (92.76%), Query Frame = 1
Query: 1 MAIEDELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARANAQDLEYSRQPPTTPGSRDGTSTLPSDEPADIFSTPPESDNTCSVTTMPSIAKGGGETEDVPVCRKSARRRKGGDDEGLNQVDAPKDSTVNIAASKPDDRELSSTICCLDGGDSKGCWRVVELLFSESEEELLRWRRMAGGGGTTGGPLRVVPEGDPEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGEALMSFEQRRGNVDGFFGPPRFGGEETGCCWDHGEEVDFAEGVDAGEALRDAAKAARVRMYRMRRSGSGVP 1119
MAIEDELSGLNRELSMFPERAFEFSKAG VVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGL SKLLPTL+ANARANAQDLEYSRQPPTTPGSRDGTSTLP DEPAD+ STPPESDNTCSVTT PSIAK GG+ EDVPVCRKSARRRKGGDDEGLNQVDAPKDSTVN+AASKPDDRELS+T+CCLDGG KGCWRVVELLFSESEE+LLRWRRMA GGGTTGGPLR VPEGDPEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGEALM+FEQRRGNVDGFFGPPRFGGEETGCCW HGEEVDFAEGVDAGE LRDAAKAARVRMYRMRRSGSG P
Sbjct: 1 MAIEDELSGLNRELSMFPERAFEFSKAGEVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGL--------------SKLLPTLIANARANAQDLEYSRQPPTTPGSRDGTSTLPCDEPADVLSTPPESDNTCSVTTTPSIAKDGGKAEDVPVCRKSARRRKGGDDEGLNQVDAPKDSTVNVAASKPDDRELSTTMCCLDGGGIKGCWRVVELLFSESEEKLLRWRRMADGGGTTGGPLRAVPEGDPEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGEALMTFEQRRGNVDGFFGPPRFGGEETGCCWGHGEEVDFAEGVDAGEVLRDAAKAARVRMYRMRRSGSGGP 359
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A836CAM0_9STRA (Putative methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM0_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.420e-30 Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = 1
Query: 16 ELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARANAQDLEYSRQPPTTPGSRDGTSTLPSDEPADI 414
ELS + +L+ FP+RAFEF+ AG V+I+QD DVGSIVWDAE++LAH+LD L GM VLELGAGTGLAG+VAARLGA VVLTDQ+KLLP L NA AN + S G+ T L S +PAD+
Sbjct: 30 ELSANDHDLARFPQRAFEFTHAGTVLIDQDFGDVGSIVWDAEVVLAHHLDATVSKSLRGMSVLELGAGTGLAGIVAARLGAHVVLTDQAKLLPQLQRNADANLTGEQSSAT-----GTVTVTEVLWSADPADL 157
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A1V9YJ95_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ95_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.610e-18 Identity = 50/102 (49.02%), Postives = 67/102 (65.69%), Query Frame = 1
Query: 16 ELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARAN 321
ELS ++R L+ R F ++ AG V I+QD+A VG VWDA ++L+HYLD + L G R++ELGAGT L +V+ARLGA VV TD S +LP +A N
Sbjct: 6 ELSTVDRSLTYAQTRRFVYAAAGVVTIDQDIAHVGGTVWDAGVVLSHYLDSLGSAALQGKRIIELGAGTALPSIVSARLGAVVVATDMSDVLPYTIAAIDGN 107
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: T0QEG4_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QEG4_SAPDV) HSP 1 Score: 94.4 bits (233), Expect = 2.250e-18 Identity = 52/107 (48.60%), Postives = 66/107 (61.68%), Query Frame = 1
Query: 16 ELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARANAQDLE 336
ELS L+ L+ ER F F+ AG VVI QD+A VG VWDA ++L+HYLD + G R++ELGAGT L ++AARLGA VV TD S +LP A N +
Sbjct: 6 ELSTLDPSLTYARERRFHFAAAGSVVILQDIAHVGGTVWDAGVVLSHYLDTLGSIAMKGKRLVELGAGTALPSIIAARLGADVVATDMSDVLPYTNAAIATNTTQCD 112
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A024U606_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U606_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.840e-17 Identity = 51/109 (46.79%), Postives = 65/109 (59.63%), Query Frame = 1
Query: 7 IEDELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARANAQDL 333
I ELS L+R L+ ER F + AG V I QD+ADVG VWDA I+L+HYLD + L G ++ELGAGT + +VA+RLGA V TD ++L R N L
Sbjct: 4 IRSELSFLDRNLTYAKERGFVYPNAGRVTILQDIADVGGTVWDASIVLSHYLDSLGTTVLQGKSLVELGAGTAVPSIVASRLGARAVATDMKQVLLYTEMAIRGNCDQL 112
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A1V9ZGK2_9STRA (Methyltransferase 21A-like isoform 1 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZGK2_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 2.120e-14 Identity = 45/87 (51.72%), Postives = 55/87 (63.22%), Query Frame = 1
Query: 16 ELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTD 276
ELS + REL+ ER F F+ AG V I QD+ V VWDA I+L+HYLD L G +LE+GAGT L +V ARLGA V+ TD
Sbjct: 2 ELSSIKRELTYAKERHFNFAIAGYVKIIQDITQVSGTVWDASIVLSHYLDSLGTITLEGKTILEIGAGTALPSIVGARLGAIVIATD 88
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A485KZD0_9STRA (Aste57867_13708 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZD0_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 3.220e-14 Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = 1
Query: 16 ELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLL 291
ELS ++R+L+ ER F F G V I QD++ VG +WDA ++L+HYLD + LSG ++E+GAGT L +V ARLG VV TD +L
Sbjct: 8 ELSYVDRDLTYAKERHFNFEHGGHVSILQDISHVGGTIWDASVVLSHYLDSLGPATLSGKSMVEIGAGTALPSIVGARLGMDVVATDMQDVL 99
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A2L2YAX9_PARTP (Methyltransferase-like protein 21D (Fragment) n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YAX9_PARTP) HSP 1 Score: 76.6 bits (187), Expect = 2.400e-12 Identity = 39/94 (41.49%), Postives = 63/94 (67.02%), Query Frame = 1
Query: 67 EFSKAGGVVIEQDVADVGSIVWDAEILLAHYLD--QAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARANAQDLEYS 342
E++ +++ V DVG +VWDA I++ YLD Q + + +SG V+++G+GTG+AGL AA LGA V+LTD +++P L N ++N + L+ S
Sbjct: 14 EYTNVELKLVQHSVGDVGCVVWDAGIVMGKYLDYQQKFVNSMSGKMVVDIGSGTGVAGLFAAALGAKVILTDLPEIIPILEKNIQSNCKALKGS 107
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A7R8XEB0_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XEB0_9CRUS) HSP 1 Score: 74.7 bits (182), Expect = 1.210e-11 Identity = 39/81 (48.15%), Postives = 52/81 (64.20%), Query Frame = 1
Query: 91 VIEQDVADVGSIVWDAEILLAHYLDQAYGSR---LSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARANA 324
++++ + DVG +VWDA ++LA YL++ L G +VLELGAGTGL GLVAA G V LTD ++ P L N R NA
Sbjct: 21 IVQKTIGDVGCVVWDAALVLAKYLERLCSEEKDFLRGKKVLELGAGTGLVGLVAAYFGGDVTLTDLPEMFPLLGENVRRNA 101
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Match: A0A7S2SQV4_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQV4_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 1.920e-11 Identity = 38/65 (58.46%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 127 VWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLVANARAN 321
VWDAE +L H+L + YG L G RVLELGAGTGL+G+VAARLGA V LT+ + +P L N N
Sbjct: 6 VWDAETILTHHLVEEYGMALQGCRVLELGAGTGLSGIVAARLGADVTLTEVEEAVPLLERNRTRN 70 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6079.16733.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6079.16733.1 >prot_Ecto-sp13_S_contig6079.16733.1 ID=prot_Ecto-sp13_S_contig6079.16733.1|Name=mRNA_Ecto-sp13_S_contig6079.16733.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=374bp MAIEDELSGLNRELSMFPERAFEFSKAGGVVIEQDVADVGSIVWDAEILLback to top mRNA from alignment at Ecto-sp13_S_contig6079:1509..4904+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6079.16733.1 ID=mRNA_Ecto-sp13_S_contig6079.16733.1|Name=mRNA_Ecto-sp13_S_contig6079.16733.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3396bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6079:1509..4904+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6079:1509..4904+ >mRNA_Ecto-sp13_S_contig6079.16733.1 ID=mRNA_Ecto-sp13_S_contig6079.16733.1|Name=mRNA_Ecto-sp13_S_contig6079.16733.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1122bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6079:1509..4904+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |