prot_Ecto-sp13_S_contig6076.16730.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6076.16730.1
Unique Nameprot_Ecto-sp13_S_contig6076.16730.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length327
Homology
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: D7G786_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G786_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 3.240e-111
Identity = 230/276 (83.33%), Postives = 234/276 (84.78%), Query Frame = 0
Query:    1 MRAFFDRNLRYWHRSWLEERRXXXXXXXXXXXXXGGEGVEGGDGMDVSDDGIGAGEEDRGSDGEGEEESTGREAGGTGTDCAATEVADSSDKXXXXXXXXXXXXXXXXXXAXXXSDVGXXXXXDDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRRRCVGGGGGPVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK 276
            MRAFFDRNLR+WHRSWLEER XXXXXXXXXXXXX    VEGGDGMDVSDD +GAGEE+RGSDGEGE                          XXXXXXXXXXXXXXXXXX XXX DVGXXXX DDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRR   G GG PVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDS VAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQI+DVYIATIKVLRILD K
Sbjct:   12 MRAFFDRNLRFWHRSWLEERXXXXXXXXXXXXXXXXXXVEGGDGMDVSDDDLGAGEENRGSDGEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGXXXXGDDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRRSGGGXGGVPVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDSGVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIMDVYIATIKVLRILDRK 287          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A6H5KJM3_9PHAE (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM3_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.580e-38
Identity = 98/197 (49.75%), Postives = 99/197 (50.25%), Query Frame = 0
Query:  225 KTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK-------------------------------------------------------------------------------------------------ELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            +TALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK                                                                                                 ELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSM HCEIM
Sbjct:    4 QTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPKDVLLETVAGPVRLYLQGRKDTVRCIVASLTDETSGDLYEELRRQDARPLDRDDASDEDDGGPVAPNWEPASRDADPTKGSRGGGDILSMLVSIYGSKELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMRHCEIM 200          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A7S4UVG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UVG3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.090e-34
Identity = 95/246 (38.62%), Postives = 107/246 (43.50%), Query Frame = 0
Query:  187 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP------------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            W + L  A  E FC  RI E+FDI+ADYPDS  AI EL  AL  T+ H +LAV LR+S++RRL+HPGANT QIIDVYI TIKV R +DP                                                                                                            KELFV EYR+MLADKL+ NL YDTDKEV NLELLKLRFGE SM  CEIM
Sbjct:  227 WDRTLDYAASECFCEIRIKEIFDIVADYPDSLPAIRELAQALDRTRMHGKLAVELRKSLKRRLIHPGANTSQIIDVYINTIKVFREIDPSDELLEAVVAEPGVRSYLRGRSDTVRCIITSLTDEEAGDLYEELRKHDARLLEEAQVDSDDEEDTPDFDWQPAPSIHKQHGALGGRVTLNRKSGAGDILAMLVGIYGSKELFVNEYRVMLADKLLANLGYDTDKEVHNLELLKLRFGEISMRQCEIM 472          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A7S4RA98_9STRA (Anaphase-promoting complex subunit 2 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RA98_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.180e-34
Identity = 95/246 (38.62%), Postives = 107/246 (43.50%), Query Frame = 0
Query:  187 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP------------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            W + L  A  E FC  RI E+FDI+ADYPDS  AI EL  AL  T+ H +LAV LR+S++RRL+HPGANT QIIDVYI TIKV R +DP                                                                                                            KELFV EYR+MLADKL+ NL YDTDKEV NLELLKLRFGE SM  CEIM
Sbjct:  227 WDRTLDYAASECFCEIRIKEIFDIVADYPDSLPAIRELAQALDRTRMHGKLAVELRKSLKRRLIHPGANTSQIIDVYINTIKVFREIDPSDELLEAVVAEPGVRSYLRGRSDTVRCIITSLTDEEAGDLYEELRKHDARLLEEAQVDSDDEEDTPDFDWQPAPSIHKQHGALGGRVTLNRKSGAGDILAMLVGIYGSKELFVNEYRVMLADKLLANLGYDTDKEVHNLELLKLRFGEISMRQCEIM 472          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: M4BJY0_HYAAE (CULLIN_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJY0_HYAAE)

HSP 1 Score: 135 bits (340), Expect = 4.320e-32
Identity = 77/169 (45.56%), Postives = 102/169 (60.36%), Query Frame = 0
Query:  187 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIK---------------------------VLRIL----DPKELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            W+QRL   V + F S RIA+LF+II ++PDS  A+ +L+  L  TQQ   L    R+S++ RLL PGANT  I+++Y++ IK                           +LRIL      +ELFV EYR+MLAD+L+ NL YDTD++VQ LELLKLRFGE S+  CEIM
Sbjct:  279 WRQRLARQVLKEFASLRIAQLFEIIKEFPDSVPALEDLRQCLERTQQQDELVRSFRDSLQSRLLQPGANTSAILEIYVSIIKDISPDLWEPDPIEADPSKTSRSRSSDDILRILVSIYGSRELFVHEYRMMLADRLLQNLKYDTDRDVQTLELLKLRFGEESLQQCEIM 447          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A8J5MDA6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MDA6_9STRA)

HSP 1 Score: 136 bits (342), Expect = 4.930e-32
Identity = 73/150 (48.67%), Postives = 98/150 (65.33%), Query Frame = 0
Query:  187 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIK------------VLRILDPKELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            W++ L   V + F S RI +LF+II ++PDS  A+ +L+  L  TQQH  L    R +++ RLL PGANT  I+D+Y++TIK             + I   +ELFV EYR+MLADKL+ NL +DTD++VQ LELLKLRFGE S+  CEIM
Sbjct:  259 WREILSRHVLQEFGSLRIKQLFEIIKEFPDSVPALEDLRQCLERTQQHGELLQEFRGALQSRLLQPGANTSAILDIYVSTIKGVLLEALSGPVKEVNIYGSRELFVNEYRMMLADKLLQNLQFDTDRDVQTLELLKLRFGEDSLQQCEIM 408          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A1E7F4J4_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4J4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 4.840e-30
Identity = 85/241 (35.27%), Postives = 106/241 (43.98%), Query Frame = 0
Query:  187 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP-------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            W  RL  AV E FC  R+ E+F+++A+YPDS  A+ ELK  L +T+ HQ +A  L+ ++ +RL HPGANT QIIDVYI TIKV R +DP                                                                                                       K+LFV E+RLMLADKL+ NL++DTDKEV  LELLKLRFGE SM +CEIM
Sbjct:   30 WSSRLDFAVSECFCLVRMEEIFELVAEYPDSHTAVVELKKVLEITRMHQAMARALKIALVKRLNHPGANTSQIIDVYINTIKVFREIDPSDRLLQVVAEPVRSYLRQRENTVRCIITSLTDAEVGGDLYEELRRQDARPLEHGQADSDDEEEPPDMDWQPLPPISKERGNFLVTGTGASGDILSMLVSIYGSKDLFVDEFRLMLADKLLSNLTFDTDKEVHTLELLKLRFGELSMRNCEIM 270          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A7S2SKH5_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SKH5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 2.870e-29
Identity = 84/245 (34.29%), Postives = 108/245 (44.08%), Query Frame = 0
Query:  187 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP-----------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            WK RL   V E  C  R++ELFD+I ++P+S+ A+G+LK  L  T Q++ L + LR +   RLLHPGANT QI+DVYI+TIK LR+LDP                                                                                                           KELFV EYR+MLADKL+ +L +D D+EV+NLELLKLRFGE+SM +CEIM
Sbjct:  281 WKTRLEFHVFETLCELRMSELFDVITEFPESSPALGDLKDCLARTHQYRDLVLSLRHAFATRLLHPGANTAQILDVYISTIKALRLLDPSGVLLEAISEPIKCYLRKREDTVRCIVTSLTDDSNSELFEELGKGDGMKPIAHNYEEGDDEGDYDELAEAGNFEDWIPDPIEADPCKNSRSRKTGDILSMLVHIYGTKELFVNEYRMMLADKLLSSLDFDADREVRNLELLKLRFGESSMLNCEIM 525          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: F0YL58_AURAN (Anaphase-promoting complex subunit 2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL58_AURAN)

HSP 1 Score: 126 bits (317), Expect = 1.110e-28
Identity = 84/230 (36.52%), Postives = 105/230 (45.65%), Query Frame = 0
Query:  191 LGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP-----------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLS-YDTDKEVQNLELLKLRFGETSMHHCEIM 324
            + L + E +  ARI EL+DIIAD+P+S  A+ EL+  L  TQQHQ LA  LR +++RRLLH GAN+ QIIDVYI+TIKVLRILDP                                                                                               KE+FV EYR MLADKL+     Y+T +E++NLELLK RFG+ S+HHCEIM
Sbjct:  205 VNLVIDENYVRARINELYDIIADFPESMCAVNELRATLSRTQQHQLLARSLRSTLQRRLLHSGANSSQIIDVYISTIKVLRILDPRDILLDVVARPVRVYLQRRKDTVRCIVANLTDELSGELYEELHRIDAPQVDYVGDSEDEIAEAGIDWAPRSNKSRLANSSSVGDILSMLISIYGTKEIFVNEYRFMLADKLIAKTGLYETARELKNLELLKFRFGDASLHHCEIM 434          
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A448ZFG1_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.440e-27
Identity = 84/242 (34.71%), Postives = 103/242 (42.56%), Query Frame = 0
Query:  187 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP--------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 324
            W  RL  AV E +C  R  E+F++IA+YPDS  A+ ELK  L  T  HQ +A  L+E++ +RL HPGANT QIIDVYI TIKV R +D                                                                                                         K+LFV E+RLMLADKL+GNLS++TD+EV  LELLKLRFG+ SM  CEIM
Sbjct:  216 WDARLDFAVAECYCLVRFDEVFELIAEYPDSHPAVLELKKVLEKTNMHQSMAKALKEALIKRLNHPGANTSQIIDVYINTIKVFREIDASDRLLQVVAEPVRSYLRQRQNTVRCIITSLTDSEVGGDLYEELRRQDARPLEHGEADSDDEEEPPDMNWTPAPPISKERGSFLATGTKGNSADILSMLVSIYGSKDLFVNEFRLMLADKLLGNLSFNTDQEVHTLELLKLRFGDLSMRSCEIM 457          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G786_ECTSI3.240e-11183.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJM3_9PHAE1.580e-3849.75Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A7S4UVG3_9STRA1.090e-3438.62Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RA98_9STRA8.180e-3438.62Anaphase-promoting complex subunit 2 n=2 Tax=Dityl... [more]
M4BJY0_HYAAE4.320e-3245.56CULLIN_2 domain-containing protein n=1 Tax=Hyalope... [more]
A0A8J5MDA6_9STRA4.930e-3248.67Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A1E7F4J4_9STRA4.840e-3035.27Anaphase-promoting complex subunit 2 n=1 Tax=Fragi... [more]
A0A7S2SKH5_9STRA2.870e-2934.29Anaphase-promoting complex subunit 2 n=1 Tax=labyr... [more]
F0YL58_AURAN1.110e-2836.52Anaphase-promoting complex subunit 2 n=1 Tax=Aureo... [more]
A0A448ZFG1_9STRA6.440e-2734.71Anaphase-promoting complex subunit 2 n=1 Tax=Pseud... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 83..121
NoneNo IPR availableGENE3D1.20.1310.10coord: 235..326
e-value: 3.3E-5
score: 26.0
NoneNo IPR availablePANTHERPTHR45957FAMILY NOT NAMEDcoord: 276..324
coord: 183..276
IPR016158Cullin homology domainPROSITEPS50069CULLIN_2coord: 232..326
score: 9.314
IPR036317Cullin homology domain superfamilySUPERFAMILY75632Cullin homology domaincoord: 258..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6076contigEcto-sp13_S_contig6076:7..6963 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6076.16730.1mRNA_Ecto-sp13_S_contig6076.16730.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6076 1..6963 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6076.16730.1 ID=prot_Ecto-sp13_S_contig6076.16730.1|Name=mRNA_Ecto-sp13_S_contig6076.16730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=327bp
MRAFFDRNLRYWHRSWLEERRRRRQRRRQRRRSSGGEGVEGGDGMDVSDD
GIGAGEEDRGSDGEGEEESTGREAGGTGTDCAATEVADSSDKEEEEEEEE
EEEEEEEEEEAEEESDVGEEEDGDDFSDMSREELSALWGVLRRLGWFSLL
QDAFSGVMFSNVLAYVRRRCVGGGGGPVDGSSAAYGWKQRLGLAVHEAFC
SARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLL
HPGANTHQIIDVYIATIKVLRILDPKELFVTEYRLMLADKLVGNLSYDTD
KEVQNLELLKLRFGETSMHHCEIMAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016158Cullin_homology
IPR036317Cullin_homology_sf