mRNA_Ecto-sp13_S_contig6076.16730.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6076.16730.1
Unique NamemRNA_Ecto-sp13_S_contig6076.16730.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: D7G786_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G786_ECTSI)

HSP 1 Score: 338 bits (868), Expect = 5.280e-113
Identity = 232/278 (83.45%), Postives = 236/278 (84.89%), Query Frame = 1 
Query:    1 GTMRAFFDRNLRYWHRSWLEERRXXXXXXXXXXXXXGGEGVEGGDGMDVSDDGIGAGEEDRGSDGEGEEESTGREAGGTGTDCAATEVADSSDKXXXXXXXXXXXXXXXXXXAXXXSDVGXXXXXDDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRRRCVGGGGGPVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK 834
            GTMRAFFDRNLR+WHRSWLEER XXXXXXXXXXXXX    VEGGDGMDVSDD +GAGEE+RGSDGEGE                          XXXXXXXXXXXXXXXXXX XXX DVGXXXX DDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRR   G GG PVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDS VAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQI+DVYIATIKVLRILD K
Sbjct:   10 GTMRAFFDRNLRFWHRSWLEERXXXXXXXXXXXXXXXXXXVEGGDGMDVSDDDLGAGEENRGSDGEGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGXXXXGDDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRRSGGGXGGVPVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDSGVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIMDVYIATIKVLRILDRK 287
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A6H5KJM3_9PHAE (Anaphase-promoting complex subunit 2 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM3_9PHAE)

HSP 1 Score: 151 bits (382), Expect = 1.660e-38
Identity = 98/197 (49.75%), Postives = 99/197 (50.25%), Query Frame = 1 
Query:  679 KTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK-------------------------------------------------------------------------------------------------ELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            +TALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPK                                                                                                 ELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSM HCEIM
Sbjct:    4 QTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDPKDVLLETVAGPVRLYLQGRKDTVRCIVASLTDETSGDLYEELRRQDARPLDRDDASDEDDGGPVAPNWEPASRDADPTKGSRGGGDILSMLVSIYGSKELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMRHCEIM 200
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A7S4UVG3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4UVG3_9STRA)

HSP 1 Score: 141 bits (356), Expect = 1.140e-34
Identity = 95/246 (38.62%), Postives = 107/246 (43.50%), Query Frame = 1 
Query:  565 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP------------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            W + L  A  E FC  RI E+FDI+ADYPDS  AI EL  AL  T+ H +LAV LR+S++RRL+HPGANT QIIDVYI TIKV R +DP                                                                                                            KELFV EYR+MLADKL+ NL YDTDKEV NLELLKLRFGE SM  CEIM
Sbjct:  227 WDRTLDYAASECFCEIRIKEIFDIVADYPDSLPAIRELAQALDRTRMHGKLAVELRKSLKRRLIHPGANTSQIIDVYINTIKVFREIDPSDELLEAVVAEPGVRSYLRGRSDTVRCIITSLTDEEAGDLYEELRKHDARLLEEAQVDSDDEEDTPDFDWQPAPSIHKQHGALGGRVTLNRKSGAGDILAMLVGIYGSKELFVNEYRVMLADKLLANLGYDTDKEVHNLELLKLRFGEISMRQCEIM 472
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A7S4RA98_9STRA (Anaphase-promoting complex subunit 2 n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RA98_9STRA)

HSP 1 Score: 141 bits (356), Expect = 8.610e-34
Identity = 95/246 (38.62%), Postives = 107/246 (43.50%), Query Frame = 1 
Query:  565 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP------------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            W + L  A  E FC  RI E+FDI+ADYPDS  AI EL  AL  T+ H +LAV LR+S++RRL+HPGANT QIIDVYI TIKV R +DP                                                                                                            KELFV EYR+MLADKL+ NL YDTDKEV NLELLKLRFGE SM  CEIM
Sbjct:  227 WDRTLDYAASECFCEIRIKEIFDIVADYPDSLPAIRELAQALDRTRMHGKLAVELRKSLKRRLIHPGANTSQIIDVYINTIKVFREIDPSDELLEAVVAEPGVRSYLRGRSDTVRCIITSLTDEEAGDLYEELRKHDARLLEEAQVDSDDEEDTPDFDWQPAPSIHKQHGALGGRVTLNRKSGAGDILAMLVGIYGSKELFVNEYRVMLADKLLANLGYDTDKEVHNLELLKLRFGEISMRQCEIM 472
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: M4BJY0_HYAAE (CULLIN_2 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BJY0_HYAAE)

HSP 1 Score: 135 bits (340), Expect = 4.530e-32
Identity = 77/169 (45.56%), Postives = 102/169 (60.36%), Query Frame = 1 
Query:  565 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIK---------------------------VLRIL----DPKELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            W+QRL   V + F S RIA+LF+II ++PDS  A+ +L+  L  TQQ   L    R+S++ RLL PGANT  I+++Y++ IK                           +LRIL      +ELFV EYR+MLAD+L+ NL YDTD++VQ LELLKLRFGE S+  CEIM
Sbjct:  279 WRQRLARQVLKEFASLRIAQLFEIIKEFPDSVPALEDLRQCLERTQQQDELVRSFRDSLQSRLLQPGANTSAILEIYVSIIKDISPDLWEPDPIEADPSKTSRSRSSDDILRILVSIYGSRELFVHEYRMMLADRLLQNLKYDTDRDVQTLELLKLRFGEESLQQCEIM 447
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A8J5MDA6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5MDA6_9STRA)

HSP 1 Score: 136 bits (342), Expect = 5.180e-32
Identity = 73/150 (48.67%), Postives = 98/150 (65.33%), Query Frame = 1 
Query:  565 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIK------------VLRILDPKELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            W++ L   V + F S RI +LF+II ++PDS  A+ +L+  L  TQQH  L    R +++ RLL PGANT  I+D+Y++TIK             + I   +ELFV EYR+MLADKL+ NL +DTD++VQ LELLKLRFGE S+  CEIM
Sbjct:  259 WREILSRHVLQEFGSLRIKQLFEIIKEFPDSVPALEDLRQCLERTQQHGELLQEFRGALQSRLLQPGANTSAILDIYVSTIKGVLLEALSGPVKEVNIYGSRELFVNEYRMMLADKLLQNLQFDTDRDVQTLELLKLRFGEDSLQQCEIM 408
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A1E7F4J4_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F4J4_9STRA)

HSP 1 Score: 129 bits (325), Expect = 5.070e-30
Identity = 85/241 (35.27%), Postives = 106/241 (43.98%), Query Frame = 1 
Query:  565 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP-------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            W  RL  AV E FC  R+ E+F+++A+YPDS  A+ ELK  L +T+ HQ +A  L+ ++ +RL HPGANT QIIDVYI TIKV R +DP                                                                                                       K+LFV E+RLMLADKL+ NL++DTDKEV  LELLKLRFGE SM +CEIM
Sbjct:   30 WSSRLDFAVSECFCLVRMEEIFELVAEYPDSHTAVVELKKVLEITRMHQAMARALKIALVKRLNHPGANTSQIIDVYINTIKVFREIDPSDRLLQVVAEPVRSYLRQRENTVRCIITSLTDAEVGGDLYEELRRQDARPLEHGQADSDDEEEPPDMDWQPLPPISKERGNFLVTGTGASGDILSMLVSIYGSKDLFVDEFRLMLADKLLSNLTFDTDKEVHTLELLKLRFGELSMRNCEIM 270
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A7S2SKH5_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SKH5_9STRA)

HSP 1 Score: 128 bits (322), Expect = 3.010e-29
Identity = 84/245 (34.29%), Postives = 108/245 (44.08%), Query Frame = 1 
Query:  565 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP-----------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            WK RL   V E  C  R++ELFD+I ++P+S+ A+G+LK  L  T Q++ L + LR +   RLLHPGANT QI+DVYI+TIK LR+LDP                                                                                                           KELFV EYR+MLADKL+ +L +D D+EV+NLELLKLRFGE+SM +CEIM
Sbjct:  281 WKTRLEFHVFETLCELRMSELFDVITEFPESSPALGDLKDCLARTHQYRDLVLSLRHAFATRLLHPGANTAQILDVYISTIKALRLLDPSGVLLEAISEPIKCYLRKREDTVRCIVTSLTDDSNSELFEELGKGDGMKPIAHNYEEGDDEGDYDELAEAGNFEDWIPDPIEADPCKNSRSRKTGDILSMLVHIYGTKELFVNEYRMMLADKLLSSLDFDADREVRNLELLKLRFGESSMLNCEIM 525
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: F0YL58_AURAN (Anaphase-promoting complex subunit 2 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL58_AURAN)

HSP 1 Score: 126 bits (317), Expect = 1.160e-28
Identity = 84/230 (36.52%), Postives = 105/230 (45.65%), Query Frame = 1 
Query:  577 LGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP-----------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLS-YDTDKEVQNLELLKLRFGETSMHHCEIM 978
            + L + E +  ARI EL+DIIAD+P+S  A+ EL+  L  TQQHQ LA  LR +++RRLLH GAN+ QIIDVYI+TIKVLRILDP                                                                                               KE+FV EYR MLADKL+     Y+T +E++NLELLK RFG+ S+HHCEIM
Sbjct:  205 VNLVIDENYVRARINELYDIIADFPESMCAVNELRATLSRTQQHQLLARSLRSTLQRRLLHSGANSSQIIDVYISTIKVLRILDPRDILLDVVARPVRVYLQRRKDTVRCIVANLTDELSGELYEELHRIDAPQVDYVGDSEDEIAEAGIDWAPRSNKSRLANSSSVGDILSMLISIYGTKEIFVNEYRFMLADKLIAKTGLYETARELKNLELLKFRFGDASLHHCEIM 434
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BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Match: A0A448ZFG1_9STRA (Anaphase-promoting complex subunit 2 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZFG1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 6.740e-27
Identity = 84/242 (34.71%), Postives = 103/242 (42.56%), Query Frame = 1 
Query:  565 WKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLLHPGANTHQIIDVYIATIKVLRILDP--------------------------------------------------------------------------------------------------------KELFVTEYRLMLADKLVGNLSYDTDKEVQNLELLKLRFGETSMHHCEIM 978
            W  RL  AV E +C  R  E+F++IA+YPDS  A+ ELK  L  T  HQ +A  L+E++ +RL HPGANT QIIDVYI TIKV R +D                                                                                                         K+LFV E+RLMLADKL+GNLS++TD+EV  LELLKLRFG+ SM  CEIM
Sbjct:  216 WDARLDFAVAECYCLVRFDEVFELIAEYPDSHPAVLELKKVLEKTNMHQSMAKALKEALIKRLNHPGANTSQIIDVYINTIKVFREIDASDRLLQVVAEPVRSYLRQRQNTVRCIITSLTDSEVGGDLYEELRRQDARPLEHGEADSDDEEEPPDMNWTPAPPISKERGSFLATGTKGNSADILSMLVSIYGSKDLFVNEFRLMLADKLLGNLSFNTDQEVHTLELLKLRFGDLSMRSCEIM 457
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6076.16730.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G786_ECTSI5.280e-11383.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJM3_9PHAE1.660e-3849.75Anaphase-promoting complex subunit 2 n=1 Tax=Ectoc... [more]
A0A7S4UVG3_9STRA1.140e-3438.62Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4RA98_9STRA8.610e-3438.62Anaphase-promoting complex subunit 2 n=2 Tax=Dityl... [more]
M4BJY0_HYAAE4.530e-3245.56CULLIN_2 domain-containing protein n=1 Tax=Hyalope... [more]
A0A8J5MDA6_9STRA5.180e-3248.67Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A1E7F4J4_9STRA5.070e-3035.27Anaphase-promoting complex subunit 2 n=1 Tax=Fragi... [more]
A0A7S2SKH5_9STRA3.010e-2934.29Anaphase-promoting complex subunit 2 n=1 Tax=labyr... [more]
F0YL58_AURAN1.160e-2836.52Anaphase-promoting complex subunit 2 n=1 Tax=Aureo... [more]
A0A448ZFG1_9STRA6.740e-2734.71Anaphase-promoting complex subunit 2 n=1 Tax=Pseud... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6076contigEcto-sp13_S_contig6076:1..6963 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score339.7
Seed ortholog evalue1.5e-90
Seed eggNOG ortholog2880.D7G786
Preferred nameAPC2
Model size987
KEGG koko:K03349
KEGG Pathwayko04110,ko04111,ko04113,ko04114,ko04120,ko04914,ko05166,map04110,map04111,map04113,map04114,map04120,map04914,map05166
KEGG ModuleM00389
Hectar predicted targeting categoryother localisation
GOsGO:0000151,GO:0000152,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005680,GO:0005737,GO:0005819,GO:0005829,GO:0005856,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009553,GO:0009561,GO:0009987,GO:0010498,GO:0015630,GO:0016567,GO:0019538,GO:0019899,GO:0019941,GO:0030163,GO:0031145,GO:0031461,GO:0031625,GO:0032446,GO:0032501,GO:0032502,GO:0032991,GO:0036211,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0048229,GO:0048856,GO:0051603,GO:0070647,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1990234
Exons6
EggNOG free text desc.ubiquitin protein ligase binding
EggNOG OGsKOG2165@1,KOG2165@2759
Ec32 ortholog descriptionSubunit of the Anaphase Promoting Complex
Ec32 orthologEc-04_003800.1
Cds size981
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036,ko04121
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6076.16730.1prot_Ecto-sp13_S_contig6076.16730.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6076 7..6963 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463846.565862-UTR-Ecto-sp13_S_contig6076:0..61681463846.565862-UTR-Ecto-sp13_S_contig6076:0..6Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig6076 1..6 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463846.580184-CDS-Ecto-sp13_S_contig6076:6..1931681463846.580184-CDS-Ecto-sp13_S_contig6076:6..193Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6076 7..193 +
1681463846.590774-CDS-Ecto-sp13_S_contig6076:1251..13401681463846.590774-CDS-Ecto-sp13_S_contig6076:1251..1340Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6076 1252..1340 +
1681463846.6016123-CDS-Ecto-sp13_S_contig6076:1578..18141681463846.6016123-CDS-Ecto-sp13_S_contig6076:1578..1814Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6076 1579..1814 +
1681463846.612427-CDS-Ecto-sp13_S_contig6076:2887..30501681463846.612427-CDS-Ecto-sp13_S_contig6076:2887..3050Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6076 2888..3050 +
1681463846.6226437-CDS-Ecto-sp13_S_contig6076:3875..40281681463846.6226437-CDS-Ecto-sp13_S_contig6076:3875..4028Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6076 3876..4028 +
1681463846.6335645-CDS-Ecto-sp13_S_contig6076:6810..69631681463846.6335645-CDS-Ecto-sp13_S_contig6076:6810..6963Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6076 6811..6963 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6076.16730.1

>prot_Ecto-sp13_S_contig6076.16730.1 ID=prot_Ecto-sp13_S_contig6076.16730.1|Name=mRNA_Ecto-sp13_S_contig6076.16730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=327bp
MRAFFDRNLRYWHRSWLEERRRRRQRRRQRRRSSGGEGVEGGDGMDVSDD
GIGAGEEDRGSDGEGEEESTGREAGGTGTDCAATEVADSSDKEEEEEEEE
EEEEEEEEEEAEEESDVGEEEDGDDFSDMSREELSALWGVLRRLGWFSLL
QDAFSGVMFSNVLAYVRRRCVGGGGGPVDGSSAAYGWKQRLGLAVHEAFC
SARIAELFDIIADYPDSAVAIGELKTALGVTQQHQRLAVLLRESVRRRLL
HPGANTHQIIDVYIATIKVLRILDPKELFVTEYRLMLADKLVGNLSYDTD
KEVQNLELLKLRFGETSMHHCEIMAS*
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mRNA from alignment at Ecto-sp13_S_contig6076:1..6963+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6076.16730.1 ID=mRNA_Ecto-sp13_S_contig6076.16730.1|Name=mRNA_Ecto-sp13_S_contig6076.16730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6963bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6076:1..6963+ (Ectocarpus species13 EcNAP12_S_4_19m)
GGCACCATGCGCGCCTTCTTCGACCGGAACCTCCGGTACTGGCACCGCAG
CTGGCTGGAGGAACGGCGACGGAGGCGGCAGCGGCGGCGGCAGCGGCGGA
GATCCAGCGGCGGCGAGGGGGTAGAGGGGGGGGACGGTATGGACGTATCT
GACGATGGCATTGGTGCGGGGGAGGAGGACCGCGGTAGTGATGGTGCGTC
GAATGCTCTGCTGTTGAATGCTTGTTGATGGAATGCTTCCGCAACGCCTG
ACGTAATGAATGCTCGTAGCTGCGAGAACACGAGACACCAAGATTTTTCG
GATGAGCGTTCATCACTTTCATTTTTTTCATGCATAGTACATAACACATG
AATGCTCTTGAATATTTTTTAACGGAACCGGACGGATACGTAGGGCAAGT
TTTTGTAGGAATGGAACAACTAGCATGAGTCAAACATGTGTTTTAGCGGG
GTAGAACCGGGTAGATACCCATCCTCCCACCAATCACATGTCGATATTGT
AGAACATTTTGTGGGGTAGAGTGAGACAGATGATGGGCTGATGGTCACGC
CGCCGAGGGGGAATCCCCCGAAAGACAGACGCAGCACAGCAGCAGCAGCA
GCAGCACACACACGTAGATAACAAACGAAGCAACCAGCACAGCAGCACAC
GAGACTGCTGTGAGGCTTAGGGCAGCCAAAGGAACACATCATAGGAGGCG
ACACAGGTCAATCTGCGGTCTGCCTTCGTCTCGCGGCAGGCCGATCTCTT
GATCCACAACAGCATGCACCCGCAAACAGAGACCATGAGACGTCCACACT
GCTGTAGGCCAAGGGCGACCAATTACACACGTAGAAGGCGTCGGGGGCGG
GTTTTTAGAGCCCGTTGCATGCTGCTTACAGCCTAAGCGAGGGAAGCAAT
AAGTACAAATCCACACAGCAGCAGCAGCTAATTGATGACAGCTTCGTGCG
CACCAAACAAACGCTCTCACGCGTCCCTACGTTGCTACACAGCAGAAGTC
CCGCATACATGTCTGACTCGTGGTGTCAGGCGAGGTGTGAGCGTCTGCAG
TGGCAGCGGTGGCCTCTGTATCATGGCGTAGACTTCACTACACCTGCTTG
CCTCTCTCGCCCCGCCCCTTTTTTTTCGCGTTTCGAGCGGTGAAATATTT
CGTTGTTTTTGTGTCGGACCCACATGTATGGAAGGTGAGACTTTCTAGCC
TATATAATGTCGAAGTGCTGCTGAATGCGATCGTGTGCTTTTTTGGGACA
GGAGAGGGGGAAGAGGAGTCGACGGGCCGAGAAGCCGGAGGCACGGGCAC
TGATTGCGCCGCTACCGAGGTCGCGGACTCTTCGGACAAGGTTTGTAGTA
CATCCCATGTTCTACGTGCCCTGTCGATGCAAGTTCTAGTCCCCCAGCTG
GTGCTACCATTAATCCAAGCCTCACGGCAAAGACGTGAATAGATCCCCCT
TGGGGATTTCCCAGGACAAGCTTTGCCCTCTATGGGAGTACGCACCACCA
GAGAGAACAAACTACCGCGGGTGGCGTGTGATCTCGGTCCAAATGTTCGC
GTGTGTGTCTGTGAAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAAG
AGGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGCAGAAGAAGAATCAGAC
GTTGGGGAGGAAGAAGATGGGGACGACTTTTCCGACATGAGCCGAGAGGA
GCTGTCGGCGCTGTGGGGCGTGCTGAGGCGACTGGGCTGGTTCTCCCTTC
TGCAAGACGCCTTCTCCGGGGTGATGTTCTCCAACGTGCTGGCCTACGTC
AGGAGGAGGTGCGTGTGCGCGCGCTTTTGTGTGTGCTTCTTTCGCTGGCA
TGGGCAGAGCTGACCAGTTCGCCAACATAAGGGACATCTCCCTTACAGGC
GGAATGGATGCAAGCTTTTCGTGTGTGTGTGCGGTGTGGGATGCACACTT
GTTCTCCTTATCCACCCCGCCCTGGCCGCTTGCTTTGTGCAGCGTTCGGA
ATATGTGGCTCGTTGGGTCGAGGTGACAACGTCTTCTAGCACAAAGGCAA
AACAACCGCAACCGCTGCAACAACCACCATATGAACAACATACCTTTTGG
GAAGAAGTGGCGCTTGGTAAAGGTCAGCATGGTTTCTAGCACAAGGACAA
TCAACAACAACAACAACAACAACAACACCGCACCCACCAACAGGAAATGA
AAAAAGCAACATCAACGTCAACATTTAACAACCAACAATTTGCCCTCTTG
CTTGTTCGTTCATAATTAAAAGCACAACCCTTCTGATTTTGGTATTCCGT
CATCAATTTGTTCTGTAGGCCTTTTTTAGCCCGTTTGGGTTAGCGCCGTG
GGTGTACCAGCCAGCGTCCGCCACAACAGCAGTAGATTAGAGCAAGTTGT
TCAGCGGGGCATGCCTCTCAGTTGTTGTTTCTTCGTTTATTGCTAGAGAG
GGACGTTCGGCGTTCATCCCCTCGCGGGCGTTCCCACGCTTTCGAACAAG
CGGTGGCTGCAAGTGGGTTGGGCGCAAGAAGCGGCCGCCCGATGACACAC
ACGGTCGCCTCGAGGGCATATCGTCAGGCGGAATGCTCACGGTATCCCCA
TGGTATTCCATGGCGTAAAACGGGTACCCGTCGAGGTTTCTATAGGTTTC
AACAACCCGAGCCTCTAATTTTTACGAAAGAACGACATACATACAAGGGA
CGGAGGCACTCACCGCCTAAACGAATGAGTGGATGCCAAAACGTCGTCCT
AGGTGCGACGGCGTGTACGACCAGCCCGTGCTAGACCACGTCATGACGTG
GAAGGACGAGGTCCTCCTTCGGTGGACAGCTCTCCTGCTCAACGACGATG
GCGAAAGACGGGGGGGGGGGGGTACCGGTAACGGCAGCGGCGGCGGCGGG
GGCCCCGTCGACGGAAGTTCCGCCGCGTACGGCTGGAAGCAGCGGCTGGG
TCTCGCGGTTCACGAGGCGTTTTGCTCGGCGAGGATAGCGGAGCTGTTCG
ACATCATCGCCGACTACCCGGATAGTGCCGTGGCGATCGGGGAGCTGAAG
GTATGTGGATGTATGCGTACGCCGTGAAGTTTCTTTTTTGCGTGGTGGGA
GTTGTAGAGAGACAGACACATGTGCGTGCGCCGTGAGATTTATTGAGGGG
GGGGGGGGGAGTTGTAGAGTTGGCGATGCGTTCTGTATCGGAGGGCAAAA
GGCTCGGCTCGACGGAGAGTTGTGGAATCGGCTCTTCTGACTGAAAGGGC
GGAGAACGTCCAAGTCCACACTGGAAGGATTATTGTTTGAATCTTGTGCC
CTAACCTCCCCCCCCCCTCCGCTCGGGTTTCCGTCTAGCGACGCAGCCTT
CAGCCCTCCTCTGCCGTCTGTCCATCGAGTTCCCACCTATCCTACCCACA
CGACTTTCCTTACCCTTGGTTTCCGCCTAACCTGTGGCAATGCGGACCCG
TAGCTAACAAGTACTTCTATGTGATAACAGAATACAAGTCGCAAAGTTGG
CGAGTAACAAGAAGATTGGGTTAAGAATCGCAGCCATATCAGCCGACGAG
GACCCTCCACGTAATCTCCATAGAAAGACCTGCACTCGACGGTGGTGACG
ACATAAGGTAGTCGACGGTCGTAATGACGACATACGGTACTCGACAGTTA
GGACGAAATATGGTACTCAACGGTGGTGACAAAATAAGGTACTCGACTGC
GGTGACGACATTAGGTACTGGGCGATGGTGACGACATAAGGTACTCGACG
GTGGTCGAAGTAAGGTACTCGATGGTGGTAATGACGACAAAAGAAGGTGA
CTCTCCACCCCAAACTGACGCTTCTCGTCCCCGGGCCCCTATTTACTGCC
GTGTGTGTGTCTCATGTCTCGCCAGACCGCCTTGGGGGTTACGCAACAGC
ACCAGAGGCTGGCGGTGCTACTGCGCGAGAGCGTGAGGAGGCGTTTGCTT
CACCCGGGGGCGAACACGCACCAGATCATCGACGTTTACATCGCCACCAT
AAAGGTCCTTCGCATCCTTGATCCGAAGGTGTGTGAGGGGGGGGGGGGGG
GGGGGGGGTGTGTGGGGGGGGGGGGGGGGGGGGGGGATGTTGGGGCCTCC
TTTTTTTAACTTCAGGCGCCCTGAAAGGNNNNNNNNNNGGGGAAAACGCC
CAACATTTTATGTTTGTATAACCCGCCACAAAGGGGGTTTTACACTTGTG
TGCGGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGCGGTTGTGATGGG
GCAGCAGGAGCGTGTGTGAATCTTGCGTCCCCTTTTCCAGTCTACGGTCA
CCTCGCATAGCGTGTAGGGGCGAGCGGAGTGTACTAGACCATCTATTGTT
GATTTGTGCCATTGACTTGCGGACCCTTCGGGTCCACTTGCCTTGTTGGG
CATGTTGGCCTGTGACCACGGGAATCTACTGCGTCAAGTGTCAAGACTAG
TACGGACAGAAGGTGCTGGGTTGAGAGAAACGGAACGGTTTTTATGTGAA
GATAAGAAAAACAACAACATTGGGTGGACCCCTCGGGATGTCTCGATCCA
GTAAGGTTTCTGGTAGATCTATTCAGAGTTTAGCAATGACAACGACCACA
ACCACGACAGTGACAAGCGATGATTACGGCGACGTCAACATCATCAGGAG
CAACATGGGCAATAACAGCAGCAGCAGCACCAGCAGCAGCAGCACCAGCA
GTGAGCAACGACAAAAACAACAACGAAAACAGCAACAACAAAAAAGATAC
AGCAACCATTTGGCAACATCAGCAAGGGCAACAACATTCAGCAGCGGCAG
AACAACAACAACAAACAACAACAATCAACGAAATTAGCGAATATAGCAAA
CAACAGCTACAGCAGCAACATCAACAACAAGTAAAACAGCTACAATAAAT
TACGACGAGGACGACCCCGACGCCCTAACAGGATGTCTTGCTGGAGACCG
TGGCGGGGCCGGTGCGCCTCTACCTGCAGGGCCGAAAGGACACGGTTCGG
TGCATCGTCGCCTCTCTCACGGACGAGACGAGCGGGGACCTATACGAAGA
GCTCAGGAGGCAGGTGGGTCAAGCGCGGACAACGGAGAATACTTCCGCAC
ATTTTGAAGTCCGTTTGCCGTTGGAGGGATTGGAATGTCGTCGTCGGCCT
TGAGGAATTCTCAATGTTTTTTTGGGCCTGTACTGCTGCTGTCTTTGCCT
CTTTCTGTTCTACTAGTTTCCTCGGGGTCTTCTCTTTTCTCCCTCTCCTC
TCCCCTTCTCCCACATACCCCTTCCGTCTTACCATGATTTTGCGTCACGC
CCTCAGTCTCCGTCCCGTTTTGCGTATCATGGCGAGCTTGTCTCAGGGCA
TTTAATGACGCTGTTAGGTGAAACAACCACCACCCTTGCTGGCTTGTGCT
TCGGGTCTGCTCCATTTCATTTCTTTTGTTGGTGTTTCGTTTTCCGCTTT
TTTTCTTGTTCGACGTTAGTACGACCTTGTTTCTCATTGTATTTTATTTC
GTTTCCCTTCCGGTGAGATAATGTAAACGCGCATTTCGTCTCGTGTGTAT
TTCTTTTGTCTCCTCTCTGTTCCCTCCTTCTCATTTTATCTTCCCTGCTT
TCTATTGTTTTAACGATCTGTTTCTTTCTTATTTTAACGACATGTTTCTT
TCTTGTGTTAATCCCCTACAGGACGCGCGACCTCTCGACCGAGACGATGC
GAGTGACGAGGATGACGGGGGCCCCGTGGCTCCAAACTGGGAGCCAGCCT
CCCGGGACGCGGACCCGACGAGGGGCAGCAGGGGGGGAGGAGACATCCTG
AGCATGCTCGTGTCCATCTACGGCAGCAAGGTTCGTGCTGTCCGGGGCGT
CATTTGAGCCCTTCTTGTGTGTGTGTGTGTTTTTTGTGTGTGTGTGTGTG
TTTTTGTTGAGAGCATCGACCGGCTGACCAACGAAAAGACGCCAGTCTCT
GCGCGGTTGAAAACACGAAATGCCGCTATAGGCTACCACGATCTGGGACC
CCGTGTGTGCGTTCGTCCCATCTGTTCTTGCGCCAGTCTGCCAGCCTTTC
GGTGTGTACGTGTGCGGCGGGCGTGAATGTTACCGGGCTTCTTGGTGTTT
TATCTTATTTTTAGTGTGTTTGTTAGATGTTTTCTGTTTTGGTGAATGCT
TTTCTCGTCCTTCATTTTGTGCTACGTTTTTTTCTGGCGTAGCATTAGCC
GGTCGGGTGGGTACCAATAGATGCAAGCGTGCATGGGTTTCGAACTTTTT
GACATTTTTGTACATGGAGCTCCATTTGTGGCCAGAGGGGGTTGGATGTT
CTCTTTCGAAGAACAGGTTGTTTGCCGTACAGCAGTCCCATCGGTTTCTC
TTCCAGAACACAACTTTCCCCATCCGCGACACAGCTTCTGCACCTTTGCC
CACCCGGTTTGCTGGGTTGGTGTGCCGGGTCCATCATCTCGCAGCTCTTT
GATACGTTGTGCAGTGTTTTTTTTTAGCACCAAGTATGCAAGCCAAGATA
GTTGTGGCTTGACTATAAAGGAGATCACAACACAGACAAGATGCCGGAAT
TTTCCTGGATTTATCTGCAGTGATTGGTGCACGACCCCCCCCCCGTGCAA
CCCTTCGTTGTGGCATCTCCACTTAACCCTGTTTGGCTTTGCCTGGACAA
TGTATTCGCCGTCCTTCTCTCTCTCTCTCTTTCTACCTCTCTCTTTCTCT
CCCTCTCTGTCTGTCTAACTGTCTCTCTTCTGTGTCTGTCTGCCTCTCTT
CTCTGTCTGTCTGTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTGGGA
CCACAAAAAGGAGCTTTTCGTAACCGAGTACCGCCTGATGCTGGCCGACA
AGCTGGTCGGCAACCTGTCGTACGACACGGACAAGGAGGTCCAGAACCTC
GAGCTGCTCAAGCTGCGCTTCGGGGAGACCAGCATGCACCACTGCGAGAT
CATGGCGAGTTAG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6076:1..6963+

>mRNA_Ecto-sp13_S_contig6076.16730.1 ID=mRNA_Ecto-sp13_S_contig6076.16730.1|Name=mRNA_Ecto-sp13_S_contig6076.16730.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=981bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6076:1..6963+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGCGCGCCTTCTTCGACCGGAACCTCCGGTACTGGCACCGCAGCTGGCT
GGAGGAACGGCGACGGAGGCGGCAGCGGCGGCGGCAGCGGCGGAGATCCA
GCGGCGGCGAGGGGGTAGAGGGGGGGGACGGTATGGACGTATCTGACGAT
GGCATTGGTGCGGGGGAGGAGGACCGCGGTAGTGATGGAGAGGGGGAAGA
GGAGTCGACGGGCCGAGAAGCCGGAGGCACGGGCACTGATTGCGCCGCTA
CCGAGGTCGCGGACTCTTCGGACAAGGAGGAGGAGGAGGAGGAAGAAGAG
GAGGAAGAGGAGGAGGAGGAGGAGGAGGAAGCAGAAGAAGAATCAGACGT
TGGGGAGGAAGAAGATGGGGACGACTTTTCCGACATGAGCCGAGAGGAGC
TGTCGGCGCTGTGGGGCGTGCTGAGGCGACTGGGCTGGTTCTCCCTTCTG
CAAGACGCCTTCTCCGGGGTGATGTTCTCCAACGTGCTGGCCTACGTCAG
GAGGAGGTGCGTCGGCGGCGGCGGGGGCCCCGTCGACGGAAGTTCCGCCG
CGTACGGCTGGAAGCAGCGGCTGGGTCTCGCGGTTCACGAGGCGTTTTGC
TCGGCGAGGATAGCGGAGCTGTTCGACATCATCGCCGACTACCCGGATAG
TGCCGTGGCGATCGGGGAGCTGAAGACCGCCTTGGGGGTTACGCAACAGC
ACCAGAGGCTGGCGGTGCTACTGCGCGAGAGCGTGAGGAGGCGTTTGCTT
CACCCGGGGGCGAACACGCACCAGATCATCGACGTTTACATCGCCACCAT
AAAGGTCCTTCGCATCCTTGATCCGAAGGAGCTTTTCGTAACCGAGTACC
GCCTGATGCTGGCCGACAAGCTGGTCGGCAACCTGTCGTACGACACGGAC
AAGGAGGTCCAGAACCTCGAGCTGCTCAAGCTGCGCTTCGGGGAGACCAG
CATGCACCACTGCGAGATCATGGCGAGTTAG
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