prot_Ecto-sp13_S_contig6075.16728.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6075.16728.1
Unique Nameprot_Ecto-sp13_S_contig6075.16728.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length190
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6075.16728.1 vs. uniprot
Match: D7G562_ECTSI (Protein kinase domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G562_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 1.530e-69
Identity = 118/129 (91.47%), Postives = 121/129 (93.80%), Query Frame = 0 
Query:    1 MEGGAPLSKASMMAVLKYQNGSTFQKIVMELVAYSYEPTQIKDLELDFLLMDKQGKGEIRLEEFKDGLQERWPVLDDPSWPNTPPPGGDSSILGTVSTQNGCPLGGGNNLGGSRSRHQDEASMVLSTSR 129
            MEGGAPLSK SMMA+L+YQNG+TFQKIVMELVAYSYEP QIKDLELDFL MDKQGKGEI LEEFKDGLQERW VLDDPSWPNTPPPGGDSSILGTVSTQNGCPLGGGNNLGGSRSRHQDEA  VLST R
Sbjct:  364 MEGGAPLSKESMMAMLEYQNGNTFQKIVMELVAYSYEPAQIKDLELDFLRMDKQGKGEISLEEFKDGLQERWAVLDDPSWPNTPPPGGDSSILGTVSTQNGCPLGGGNNLGGSRSRHQDEACTVLSTWR 492
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BLAST of mRNA_Ecto-sp13_S_contig6075.16728.1 vs. uniprot
Match: A0A6H5KUQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUQ0_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.160e-16
Identity = 52/111 (46.85%), Postives = 69/111 (62.16%), Query Frame = 0 
Query:    4 GAPLSKASMMAVLKYQNGSTFQKIVMELVAYSYEPTQIKDLELDFLLMDKQGKGEIRLEEFKDGLQE-RWPVLDDPSW------PNTPPPGGDSSILGTVSTQNGCPLGGG 107
            GAPLSK SM+A++ +Q  + F+K+ +ELVAYSYEP+QIKDLEL F  MDK GKG + L +FK  + E R  +    S       P   P GG+ +    V+  NG P+GGG
Sbjct:  317 GAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFREMDKTGKGFVTLADFKAAVMELRLSIAQKESGVAAAARPGEKPAGGEPTNPEVVAPSNGRPVGGG 427
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BLAST of mRNA_Ecto-sp13_S_contig6075.16728.1 vs. uniprot
Match: D7FPG2_ECTSI (Calcium-dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPG2_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 1.230e-13
Identity = 38/67 (56.72%), Postives = 51/67 (76.12%), Query Frame = 0 
Query:    4 GAPLSKASMMAVLKYQNGSTFQKIVMELVAYSYEPTQIKDLELDFLLMDKQGKGEIRLEEFKDGLQE 70
            GAPLSK SM+A++ +Q  + F+K+ +ELVAYSYEP+QIKDLEL F  MDK G+G + L +FK  + E
Sbjct:   98 GAPLSKDSMLALVNFQKTNLFEKVALELVAYSYEPSQIKDLELRFREMDKTGRGFVTLADFKAAVME 164
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6075.16728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G562_ECTSI1.530e-6991.47Protein kinase domain containing protein n=1 Tax=E... [more]
A0A6H5KUQ0_9PHAE1.160e-1646.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FPG2_ECTSI1.230e-1356.72Calcium-dependent protein kinase n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 17..36
e-value: 5.1E-8
score: 34.6
NoneNo IPR availableGENE3D1.10.238.10coord: 37..70
e-value: 5.1E-8
score: 34.6
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 39..74
score: 8.795
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 29..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6075contigEcto-sp13_S_contig6075:4406..6420 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6075.16728.1mRNA_Ecto-sp13_S_contig6075.16728.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6075 587..7279 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6075.16728.1 ID=prot_Ecto-sp13_S_contig6075.16728.1|Name=mRNA_Ecto-sp13_S_contig6075.16728.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=190bp
MEGGAPLSKASMMAVLKYQNGSTFQKIVMELVAYSYEPTQIKDLELDFLL
MDKQGKGEIRLEEFKDGLQERWPVLDDPSWPNTPPPGGDSSILGTVSTQN
GCPLGGGNNLGGSRSRHQDEASMVLSTSRPLRQRHPHQHLQRQGKRKACQ
QKSTRGGEAVGRRQGRSTRRRRQWSTARHRRASRWAATP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair