prot_Ecto-sp13_S_contig60741.16727.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60741.16727.1
Unique Nameprot_Ecto-sp13_S_contig60741.16727.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length44
Homology
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: D7G154_ECTSI (UBC core domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G154_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 4.380e-22
Identity = 40/43 (93.02%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            M  +AVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM
Sbjct:    1 MFGQAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: A0A6H5KW20_9PHAE (UBC core domain-containing protein n=5 Tax=Ochrophyta TaxID=2696291 RepID=A0A6H5KW20_9PHAE)

HSP 1 Score: 87.8 bits (216), Expect = 5.950e-21
Identity = 39/40 (97.50%), Postives = 40/40 (100.00%), Query Frame = 0
Query:    4 KAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            +AVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM
Sbjct:   37 QAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 76          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: B8CAB3_THAPS (Ubiquitin-conjugating enzyme 1 n=19 Tax=Bacillariophyta TaxID=2836 RepID=B8CAB3_THAPS)

HSP 1 Score: 84.0 bits (206), Expect = 1.980e-19
Identity = 37/43 (86.05%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            ML +AVIFGPDDTPWEGGTFKL+LEF+EDYPNK PSVRFLT+M
Sbjct:   34 MLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPSVRFLTKM 76          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: A0A7S0FQ92_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FQ92_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 2.780e-19
Identity = 36/43 (83.72%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            ML +AVIFGPDDTPWEGGTFKL+LEF+EDYPNK P+VRFLT+M
Sbjct:   35 MLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPNVRFLTKM 77          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: A0A1Z5KB46_FISSO (Ubiquitin-conjugating enzyme E2 A n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KB46_FISSO)

HSP 1 Score: 82.4 bits (202), Expect = 3.940e-19
Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            ML +AVIFGPDDTPWEGGTFKL+LEF+EDYPNK P VRFLT+M
Sbjct:    6 MLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPQVRFLTKM 48          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: A0A7S1UWA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UWA9_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.940e-19
Identity = 36/43 (83.72%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            ML +AVIFGPDDTPWEGGTFKL+LEF+EDYPNK P VRFLT+M
Sbjct:   56 MLWQAVIFGPDDTPWEGGTFKLVLEFTEDYPNKAPQVRFLTKM 98          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: A0A812WBD6_SYMMI (UBC2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WBD6_SYMMI)

HSP 1 Score: 83.2 bits (204), Expect = 4.260e-19
Identity = 34/43 (79.07%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            M+ +A++FGPDDTPWEGGTFKLL EFSEDYPNKPP+V+FLT+M
Sbjct:   34 MVWQAIVFGPDDTPWEGGTFKLLAEFSEDYPNKPPAVKFLTKM 76          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: A0A059CZA9_EUCGR (UBC core domain-containing protein n=2 Tax=Pentapetalae TaxID=1437201 RepID=A0A059CZA9_EUCGR)

HSP 1 Score: 82.0 bits (201), Expect = 4.300e-19
Identity = 35/43 (81.40%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            ML  AVIFGPDDTPW+GGTFKL L+FSEDYPNKPP+VRF++RM
Sbjct:   34 MLWNAVIFGPDDTPWDGGTFKLTLQFSEDYPNKPPTVRFVSRM 76          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: A0A0D2T8P5_GOSRA (UBC core domain-containing protein n=1 Tax=Gossypium raimondii TaxID=29730 RepID=A0A0D2T8P5_GOSRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.950e-19
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            ML  AVIFGPDDTPW+GGTFKL L+F+EDYPNKPP+VRF++RM
Sbjct:   34 MLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFISRM 76          
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Match: UPI000C1CECC4 (ubiquitin-conjugating enzyme E2 2-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CECC4)

HSP 1 Score: 81.3 bits (199), Expect = 5.220e-19
Identity = 34/43 (79.07%), Postives = 40/43 (93.02%), Query Frame = 0
Query:    1 MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM 43
            ML  AVIFGPDDTPW+GGTFKL L+F+EDYPNKPP+VRF++RM
Sbjct:   34 MLWNAVIFGPDDTPWDGGTFKLTLQFTEDYPNKPPTVRFISRM 76          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60741.16727.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G154_ECTSI4.380e-2293.02UBC core domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KW20_9PHAE5.950e-2197.50UBC core domain-containing protein n=5 Tax=Ochroph... [more]
B8CAB3_THAPS1.980e-1986.05Ubiquitin-conjugating enzyme 1 n=19 Tax=Bacillario... [more]
A0A7S0FQ92_9STRA2.780e-1983.72Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A1Z5KB46_FISSO3.940e-1983.72Ubiquitin-conjugating enzyme E2 A n=1 Tax=Fistulif... [more]
A0A7S1UWA9_9STRA3.940e-1983.72Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A812WBD6_SYMMI4.260e-1979.07UBC2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A059CZA9_EUCGR4.300e-1981.40UBC core domain-containing protein n=2 Tax=Pentape... [more]
A0A0D2T8P5_GOSRA4.950e-1979.07UBC core domain-containing protein n=1 Tax=Gossypi... [more]
UPI000C1CECC45.220e-1979.07ubiquitin-conjugating enzyme E2 2-like n=1 Tax=Ole... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 4..43
e-value: 2.8E-13
score: 49.7
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 1..43
score: 15.378
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..43
e-value: 1.9E-17
score: 65.3
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 4..42
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 1..43
NoneNo IPR availablePANTHERPTHR24067:SF270coord: 1..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60741contigEcto-sp13_S_contig60741:673..804 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60741.16727.1mRNA_Ecto-sp13_S_contig60741.16727.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60741 673..804 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60741.16727.1 ID=prot_Ecto-sp13_S_contig60741.16727.1|Name=mRNA_Ecto-sp13_S_contig60741.16727.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=44bp
MLPKAVIFGPDDTPWEGGTFKLLLEFSEDYPNKPPSVRFLTRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD