mRNA_Ecto-sp13_S_contig6074.16726.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A6H5KWJ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWJ7_9PHAE) HSP 1 Score: 353 bits (907), Expect = 2.090e-118 Identity = 183/198 (92.42%), Postives = 183/198 (92.42%), Query Frame = 3
Query: 3 WMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEVSSTVGGSGPGRGPRGGRGQDKGGGGGLVLKISVDGDPLRSRLFSGKEDDSIIPLSDFRTAVGNLLPTAV 596
WMMAADYFMSARARGLRV PELD LGTATIRHLVWRFS FYGDDEMMRTMVGPLLAHIIECAAGSDIAGP TGS NV GT GGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEV ST GGSGPGR PRGGRGQDKGGGGGLVLKISVDGDPLRSRLFSGK D IIPLSDFRTAVGNLLPTAV
Sbjct: 130 WMMAADYFMSARARGLRVTPELDVLGTATIRHLVWRFSRFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPVTGSRNVPGTDGGGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEVCSTGGGSGPGREPRGGRGQDKGGGGGLVLKISVDGDPLRSRLFSGKGGDGIIPLSDFRTAVGNLLPTAV 327
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: D8LBW8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBW8_ECTSI) HSP 1 Score: 345 bits (886), Expect = 5.710e-113 Identity = 179/198 (90.40%), Postives = 184/198 (92.93%), Query Frame = 3
Query: 3 WMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEVSSTVGGSGPGRGPRGGRGQDKGGGGGLVLKISVDGDPLRSRLFSGKEDDSIIPLSDFRTAVGNLLPTAV 596
WMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFS FYGDDEMMRTMVGPLLAHIIECAAGSD+AGPATGS NV G ASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEVSST G SGPGRGPRGGRG+DKGGGG LVLKISVDG+PLRSRLF+GK D IIPLSDF TAV + LPTAV
Sbjct: 291 WMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSRFYGDDEMMRTMVGPLLAHIIECAAGSDVAGPATGSRNVPGADASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEVSSTGGVSGPGRGPRGGRGEDKGGGGDLVLKISVDGEPLRSRLFAGKGGDGIIPLSDFHTAVRSFLPTAV 488
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A8K1CD03_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CD03_PYTOL) HSP 1 Score: 68.2 bits (165), Expect = 4.040e-9 Identity = 36/129 (27.91%), Postives = 66/129 (51.16%), Query Frame = 3
Query: 3 WMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEV 389
WM DYF A L + P +AL T+RH+ +RF+ FY + +VG LL ++++ ++ +++ S HDV+ILA+L+A++A+++ + +WP Y S ++ E+
Sbjct: 208 WMTCYDYFTCRAAHELPLIPGTEALEDDTLRHITFRFNQFYSHRRIRSLLVGMLLDNVLQ---------------EMTKAQQEASDAKKLIVYSGHDVSILAILHAIDAEIVHNEKWWPGYSSAVSLEL 321
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A7S1USL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1USL6_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.340e-7 Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 3
Query: 3 WMMAADYFMSARARGLRVAPEL-----------DALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRD-----YWPPYGSTIAFEV 389
W+ A+D+F+ +A ++ + L +A+ T+ HL WR+ +Y ++ + P L ++ + AT + N S V SCHDVTILALLY + AD L D +WP YG+T+ FE+
Sbjct: 99 WIEASDHFVCRKAHQVKFSRFLADGDDEAENILEAMSFQTLTHLAWRYRQWYRSIPLLAAIAAPPLREVL-------VQMQATPTMNPD-------HRSPFVVYSCHDVTILALLYGIGADFLADETKGDWRFWPAYGTTLVFEL 229
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A067D2S0_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D2S0_SAPPC) HSP 1 Score: 63.2 bits (152), Expect = 1.530e-7 Identity = 42/129 (32.56%), Postives = 65/129 (50.39%), Query Frame = 3
Query: 3 WMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEV 389
WM AAD+F+ A L PE L TI HL RF +Y D ++R + L+ +++ S A G+T+V R+ S HDV++LALLYA++ L++ +WP Y + + E+
Sbjct: 179 WMKAADHFICRDAHALEYLPETKELAKPTIDHLSLRFQQYYTDPVILRLVATGLVTELLDQMEQS----MAGGATHVK-------EAIRIYSG--HDVSLLALLYALDTSLVQP--FWPDYSAAVVLEL 292
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A1V9ZQX2_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQX2_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 2.770e-7 Identity = 42/129 (32.56%), Postives = 60/129 (46.51%), Query Frame = 3
Query: 3 WMMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRDYWPPYGSTIAFEV 389
WM AAD+F+ +A L P L TI HL RF FY D +++ +V L + +++ A P + S HDV++LALLYAME+ L D +WP Y S + E+
Sbjct: 180 WMKAADHFVCRQAHRLEYIPNTQELAKPTIDHLSLRFLQFYSDPIILKLVVKDLASKLLDEMELCIKAKP--------------NEKEYIQIYSGHDVSLLALLYAMESQL--DHPFWPDYSSAVVLEL 292
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A7S0AML5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AML5_9STRA) HSP 1 Score: 62.0 bits (149), Expect = 2.790e-7 Identity = 57/212 (26.89%), Postives = 87/212 (41.04%), Query Frame = 3
Query: 3 WMMAADYFMSARARGL-------------RVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRD------YWPPYGSTIAFEVSSTVGGSGPGRGPRGGRGQDKGGGGGLVLKISVDGDPLRSRLFSGKEDDSIIPLSDFRTAVGNL 581
W+ AAD+F+ R+ G R+ L ++ I+HL WRF +Y ++ + P L +I G + + G + +V SCHDVTIL++LY + A+ LED D +WP Y ST+ E+ G +L+I V+G P+R K D + LSDF + L
Sbjct: 98 WIHAADHFICRRSHGRPYSEFCAGTNDDRRIEEALASMRRPVIQHLAWRFRQWYKSAPLLAAIAAPPLR---------EIEGQIRQAIDNGGE-----RRAPMVIYSCHDVTILSILYGLGAEFLEDDDSNDWKCFWPSYASTLIIELVRMKEAKGDVDDTH-------------ILRIIVNGKPVRLVAMQKKLDKDL-RLSDFSAIIDML 281
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A7S1UUP6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UUP6_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 3.700e-7 Identity = 38/113 (33.63%), Postives = 55/113 (48.67%), Query Frame = 3
Query: 66 LDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLLEDRD-----YWPPYGSTIAFEV 389
L+A+ T+ HL WR+ +Y ++ + P L ++ + AT + N S V SCHDVTILALLY + AD L D +WP YG+T+ FE+
Sbjct: 27 LEAMSFQTLTHLAWRYRQWYRSIPLLAAIAAPPLREVL-------VQMQATPTMNPD-------HRSPFVVYSCHDVTILALLYGIGADFLADETKGDWRFWPAYGTTLVFEL 125
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A7S3L5M2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L5M2_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 5.990e-7 Identity = 47/154 (30.52%), Postives = 65/154 (42.21%), Query Frame = 3
Query: 3 WMMAADYFMSARARGL------------RVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIE-----CAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLL-EDRD----YWPPYGSTIAFEVSST 398
W+ AAD+F+ A GL R+ L A+ T HL WRF +Y + ++ + GP I+ D P T +CHD+TIL LLY + A L +DR +WPPY ST+AFE+ T
Sbjct: 117 WVEAADHFVCREAHGLPLSSFTDFEGDDRIEQTLRAMSYPTKTHLSWRFRQWYQNRRLLSAIAGPPFREILNQMQETTRLRDDEKRPFT-------------------LYACHDITILGLLYGIGASFLADDRGSGWMWWPPYASTLAFELVRT 251
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Match: A0A7S2H6D3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H6D3_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 1.920e-5 Identity = 69/268 (25.75%), Postives = 102/268 (38.06%), Query Frame = 3
Query: 3 WMMAADYFMSARARGL------------RVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVGPLLAHIIECAAGSDIAGPATGSTNVSGTGASGGSLSRVVSSSCHDVTILALLYAMEADLL----------------EDRDY-----WPPYGSTIAFEVSSTVGGSGPGRGPRGGRGQDKGGGGGLVLKISVDGDPLR--------SRLFSGKEDDS-------IIPLSDFRTAVGNLLPTAV*H*GTFTVRIVSQKSRGNSIWV 662
W+ A D+F+ + GL V + A+ + T+ HL WRF +Y ++E++ + P L I G + P G V SCHDVT+L+LLY + AD L E+ ++ WP Y ST+AFE+ R G G D V++I ++G PL+ + G D + + LSDF V +L V G V + R SIW
Sbjct: 312 WIHATDHFVCRASHGLPYTAYSAFENDESVESTMAAMASPTLAHLAWRFRQWYLNEELLSAVAAPPLREI----EGQICSAPFLGVEE----------RRPFVVYSCHDVTLLSLLYGIGADFLIKKKKRVNGFDAMNGIEEEEWGSWRWWPAYASTLAFELV---------RVDERGTGLDS-----HVIRIFLNGKPLKVVDPEMRKEGIMIGDTDSANNGFGSKALRLSDFSRIVNHL--EQVGGRGRSNVGRDEDEERDMSIWT 549 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6074.16726.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6074.16726.1 >prot_Ecto-sp13_S_contig6074.16726.1 ID=prot_Ecto-sp13_S_contig6074.16726.1|Name=mRNA_Ecto-sp13_S_contig6074.16726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=198bp MMAADYFMSARARGLRVAPELDALGTATIRHLVWRFSWFYGDDEMMRTMVback to top mRNA from alignment at Ecto-sp13_S_contig6074:6366..8085- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6074.16726.1 ID=mRNA_Ecto-sp13_S_contig6074.16726.1|Name=mRNA_Ecto-sp13_S_contig6074.16726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1720bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6074:6366..8085- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6074:6366..8085- >mRNA_Ecto-sp13_S_contig6074.16726.1 ID=mRNA_Ecto-sp13_S_contig6074.16726.1|Name=mRNA_Ecto-sp13_S_contig6074.16726.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=594bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6074:6366..8085- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |