mRNA_Ecto-sp13_S_contig6070.16720.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6070.16720.1
Unique NamemRNA_Ecto-sp13_S_contig6070.16720.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A6H5JSE0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSE0_9PHAE)

HSP 1 Score: 618 bits (1594), Expect = 9.870e-215
Identity = 373/398 (93.72%), Postives = 382/398 (95.98%), Query Frame = 1 
Query:    1 MSVPPGKSTSQATNGSNSGVRGSGGGGADKTAADDDTLNLTEVLEERELLKSRVFELENRLRETEEELEYYFEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------SLDGEAPSNVNYTAEPWSKTLGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEGFRDLDDLADELDIRGREYESTLSKALDQRELPTEGPLHDKAARARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLEVK 1173
            MSVPPGKSTSQATNGS+ GVR SGGGGADKTAA+DDTLNLT+V+EER+LLKSRVFELENRLRETEEELEYYFEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       S DGEAPSNVNYT EPWSKTLGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRIL R DEYCQAGEEFRQ+GVSLAEELYSKEASRVMFSNNFIAEGIGDLAANM RFTTALKQVHELVALLVDSVKSGLAAPLH FNEGFRDLDDLADELDIRGREYESTLSKALDQRELPTEGP+HDKAARARW+FELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLE +
Sbjct:    1 MSVPPGKSTSQATNGSSRGVRSSGGGGADKTAAEDDTLNLTQVVEERDLLKSRVFELENRLRETEEELEYYFEFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHDGEAPSNVNYT-EPWSKTLGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILTRTDEYCQAGEEFRQRGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMLRFTTALKQVHELVALLVDSVKSGLAAPLHTFNEGFRDLDDLADELDIRGREYESTLSKALDQRELPTEGPIHDKAARARWNFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLEAE 397
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A8K1CP00_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CP00_PYTOL)

HSP 1 Score: 111 bits (277), Expect = 9.000e-23
Identity = 79/291 (27.15%), Postives = 135/291 (46.39%), Query Frame = 1 
Query:  412 TLGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEG-FRDLDDLADELDIRGREYESTLSKALDQRELPTEGP------------------------------------LHDKAARARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLEVK 1173
            ++G+N  L++  DSPMFR+++ +F+++L  L+G    ILAR  EY   G  + ++  +LAEE+  ++ SR +F+ +     +G L++        + Q+      ++ S+++ L   ++ F E   ++  DL  E+     EYES L K L + +    G                                     L     +AR  FEL RFD+VRY+N+LDS+K  +L    N+T YA L  F     +   +E  +R+RQ  L    +  + D+ +W   R  LE +
Sbjct:  144 SVGKNVVLDFVEDSPMFRRQLESFEESLGGLRGLMKEILARTKEYVATGMRYGEEETALAEEIVHRKYSRALFTTS--CPELGSLSSVFTEVHDTITQIQSSRVSMLLSIEALLHHSIYRFTEQELKEAGDLRKEVLRLADEYESQLGKLLGKSKQSGSGSNSSALTVSDPMNILGSGSGGTSSTNLTSGTSNGMRALERDVMQARQRFELARFDLVRYLNRLDSQKKFVLIECFNSTLYAFLGHFHACHELIKSIEPGLRQRQETLQKCKRDFEDDDKMWTAQREALEAR 432
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BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A024GAF6_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GAF6_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.800e-17
Identity = 81/301 (26.91%), Postives = 130/301 (43.19%), Query Frame = 1 
Query:  418 GRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEG-FRDLDDLADELDIRGREYESTLSKALDQRE------------------LPTE-----GP---------------------------LHDKAARARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLE 1167
            G N  ++YS DSP FR+++   + ++  L+     I + A EY   G  F +   ++A E+ +++ SR +F+  +     G L++    F   + Q+H     L+ S++S L     +F E  FRD+ DL  E+   G EYES L K L +                    + TE     GP                           L     +AR  FEL RFD+V Y+N+++S+K L L    N++ YA     Q         E  +RRRQ +L    ++  +D+ +W   R +LE
Sbjct: 1291 GHNIIIDYSDDSPNFRRQLEGLELSINGLRTLLKEIGSSAKEYVAMGLRFGESEAAIANEITNRKHSRAIFTTCY--PEFGTLSSIFNEFHEIVTQMHSSRVSLLFSIESLLLHATEEFGEKEFRDITDLRKEMLRLGDEYESLLGKFLSKSRPGNSNNTNDTGTLNPMTYVDTEHSFPLGPPSLLIHTNSLSNAIGDRFPTTPSNLKSLEKDVCQARMRFELSRFDLVWYLNRMESQKKLFLIEVFNSSLYAFFGHIQACHEFIQSQEPKVRRRQEMLQTAKEKFAQDDTMWLEQREKLE 1589
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BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: F0W093_9STRA (Uncharacterized protein AlNc14C4G535 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W093_9STRA)

HSP 1 Score: 93.6 bits (231), Expect = 6.550e-17
Identity = 83/328 (25.30%), Postives = 140/328 (42.68%), Query Frame = 1 
Query:  355 SLDGEAPSNV--NYTAEPWSKTL--GRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEG-FRDLDDLADELDIRGREYESTLSKALDQR---------ELPTEGPL------------------HDKAA-----------------------RARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLEVK 1173
            +LD +  SN   N +  P  +++  G N  L+YS DSP+FR+++  F+ ++  L+     I     +Y  +G  F +   ++A E+  ++ SR +F+  +     G L++    F   + Q+H      + S++S L     +F E   RD+ DL  E+   G EYE  L K L +          E+P+  P+                  H  +A                       +AR  FEL RFD+V  +N+++S+K L L    N++ YA  A  Q         E   R+RQ +L    +   +D  +W   R +LE +
Sbjct:   65 ALDAKTQSNSLKNASNFPEKQSIRGGHNVILDYSDDSPIFRRQLEGFEPSVSGLRALLKEIGQATKDYVASGLRFGETEAAIANEITHRKHSRAIFTTCY--PEFGTLSSIFNEFHEIITQMHSSRVSFLFSIESLLLHGTEEFGEKEIRDITDLRKEMVRLGDEYEGLLGKFLSKSRPGTSSNTIEIPSNLPMTFIDTEHSFPVGPPSLLVHTNSASNSIGDRIPTTPSNLKALEKDVCQARMRFELSRFDLVWCLNRMESQKKLFLIEAFNSSLYAFFAHIQACHEFIRSQEPKARQRQEMLQNAKETFAQDEKMWLQQREKLETQ 390
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BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A0P1ANE9_PLAHL (Arf-gap with coiled-ank repeat and ph domain-containing protein 2-like isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1ANE9_PLAHL)

HSP 1 Score: 90.5 bits (223), Expect = 7.300e-16
Identity = 78/316 (24.68%), Postives = 131/316 (41.46%), Query Frame = 1 
Query:  421 RNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEG--FRDLDDLADELDIRGREYESTLSKALDQRELPTE---------------------------------------------------------GPLHDKAARA--------RWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLE 1167
            +N  L++  DSPMFR+++ +F++++  L      I++ + EY  AG+ F +   +LA+EL  ++ +R +FS +     +G L+         L+Q+      ++  V+S L+  +  F E    ++  +L  ++   G EYE+ L K L +   P +                                                         G   DK  RA        R  FEL RFD+VRYMN++DS K  +L    N+  YA L  F     +   +E S+R+RQ +L    K  + D  +W   R  L+
Sbjct:  137 KNVVLDFVEDSPMFRRQLESFEESVTGLCALLKEIVSHSKEYAAAGKHFGEVETALADELIQRKHARAIFSTS--CSELGSLSDLFGEMHDTLEQLQSSRVSMLLGVESLLSRSIQQFAEKELLKEAGELKKDVTRLGDEYEALLGKLLSKSRQPGQQANGTGTPTSGSDASLGSPAQFIGGYNGNVESMITGTPSASATFGGGSSSNILGLDSGLASDKQQRALEREVLIARRRFELARFDLVRYMNRIDSMKKYVLVECFNSIMYAQLGHFHACHELVKSIEPSLRKRQEMLQVSRKDFEEDEIMWQSQRKYLD 450
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BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A484EF15_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EF15_BRELC)

HSP 1 Score: 78.6 bits (192), Expect = 5.620e-12
Identity = 70/313 (22.36%), Postives = 124/313 (39.62%), Query Frame = 1 
Query:  415 LGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEG--FRDLDDLADELDIRGREYESTLSKALD----------QRELPTEG-------------------------------------------------PLHDKAARARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGGSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLEV 1170
              +N  L+Y  DSPMFR+++ +F++++  L+     I+A + EY  AG+ F ++  +LA EL  ++ +R +FS +     +G ++      +  L Q+      ++  ++S ++  +  F E    ++  +L  ++   G EYE+ L K L           Q   PT G                                                  L  +   AR  FEL RFD+VRY N++D  K  +L    N+  YA  + F     +   +E    + Q +L    +   +D  +W   R  L  
Sbjct:  128 FSKNVVLDYVEDSPMFRRQIESFEESITGLRALLKEIVAHSKEYTAAGKYFGEQETALAHELIQRKYARAIFSTS--CPELGSVSELFKEMSDTLVQIQSSRVSMLLRIESFVSQSMSQFAEKELLKEASELKKDVARLGDEYETLLGKLLSKSRQIGPLGSQGSTPTNGFDTCINSPAQRSTSLNCNGESTLSTIPLSSSSHTSFGLDPGGGSQKHHRTLEREVVVARRRFELARFDLVRYFNRIDGMKKHVLVECCNSILYAQSSHFHACHDVLKAIESKFWKHQELLQVSRQNLAQDELMWTSQREHLNT 438
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A7S4A3T2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3T2_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.210e-10
Identity = 73/253 (28.85%), Postives = 106/253 (41.90%), Query Frame = 1 
Query:  415 LGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFN-EGFRDLDDLADELDIRGREYESTLSKALDQRELPTEGPLHDKAARARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGG-GSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLE 1167
            LG +  LEY+RDSPMFRK+  AF+++L  L      +  R  ++  A    R      A  L  +  +R +F  N   E +GD +A       AL    +    L D+  + +A+ L  F  E   D +    ++   G  YE  L  AL    L  E     K AR    FE  R  +VRY+N +D+ K +++   +     AL    + G G     +E      +  L    KR   D  LW  V  RLE
Sbjct:   74 LGPSVRLEYTRDSPMFRKQCEAFENSLAGLDSLLGGLAIRLRDWSAALRASRDAARECAAWLKDRRHARALFGGN---EALGDSSARCATLADALDSYAQRQGRLADAFGAEVASALDAFRAEELGDCEGFIGDVWRLGDAYEQKLCAALRLDTLDGEARADLKDARGA--FERSRLALVRYLNGVDAAKCIVIGEAVAAAGEALEDDRRSGEGEAFWRLEAEASLCRQALPVAAKRRRIDGELWDRVGERLE 321
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A8J2WJQ7_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WJQ7_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 3.790e-10
Identity = 73/253 (28.85%), Postives = 106/253 (41.90%), Query Frame = 1 
Query:  415 LGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFN-EGFRDLDDLADELDIRGREYESTLSKALDQRELPTEGPLHDKAARARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGG-GSICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLE 1167
            LG +  LEY+RDSPMFRK+  AF+++L  L      +  R  ++  A    R      A  L  +  +R +F  N   E +GD +A       AL    +    L D+  + +A+ L  F  E   D +    ++   G  YE  L  AL    L  E     K AR    FE  R  +VRY+N +D+ K +++   +     AL    + G G     +E      +  L    KR   D  LW  V  RLE
Sbjct:   74 LGPSVRLEYTRDSPMFRKQCEAFENSLAGLDSLLGGLAIRLRDWSAALRASRDAARECAAWLKDRRHARALFGGN---EALGDSSARCATLADALDSYAQRQGRLADAFGAEVASALDAFRAEELGDCEGFIGDVWRLGDAYEQKLCAALRLDTLDGEARADLKDARGA--FERSRLALVRYLNGVDAAKCIVIGEAVAAAGEALEDDRRSGEGEAFWRLEAEASLCRQALPVAAKRRRIDGELWDRVGERLE 321
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: D0N718_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N718_PHYIT)

HSP 1 Score: 72.4 bits (176), Expect = 6.120e-10
Identity = 47/170 (27.65%), Postives = 84/170 (49.41%), Query Frame = 1 
Query:  376 SNVNYTAEPWSKTLGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEG--FRDLDDLADELDIRGREYESTLSKALDQRELP 879
            S+ + T E       +N  L+Y  DSPMFR+++  F++++  L+     ++A + EY  AG+ F Q+   LA+EL  ++ +R +FS +     +G L+         L QV      ++  V+S L+  +  F E    ++  +L  ++   G EYE+ L K L +   P
Sbjct:  463 SDADETREKIQSRFSKNVVLDYVEDSPMFRRQLEGFEESITGLRALLKELVAHSKEYAAAGKHFGQEETELADELIQRKHARAIFSTS--CPELGSLSELFGEMHDTLAQVQSSRVSMLLGVESLLSRSIQQFTEKELLKEAGELRKDVTRLGEEYETLLGKLLSKSRQP 630
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Match: A0A5D6XPU4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPU4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 9.670e-10
Identity = 45/153 (29.41%), Postives = 82/153 (53.59%), Query Frame = 1 
Query:  406 SKTLGRNAALEYSRDSPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEELYSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSGLAAPLHDFNEG-FRDLDDLADELDIRGREYESTLSKAL 861
            S T G+N  L++  DSPMFR+++  F+++L  L+G    +LAR  EY  AG  +  +  +LAEE+  ++ +R +F+ +     +G L++        + Q+      ++ S+ + ++  +  F+E   R+  DL  E+     EYE+ LSK L
Sbjct:  128 STTTGKNVVLDFVEDSPMFRRQLEGFEESLGGLRGLLKEVLARTKEYVAAGRRYGDEETALAEEIVHRKYARALFTTS--CPELGSLSSLFNDVHDTVTQIQSSRVSMLLSIDALMSQAISAFSEQELREATDLRKEVGRLADEYEALLSKLL 278
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6070.16720.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A6H5JSE0_9PHAE9.870e-21593.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A8K1CP00_PYTOL9.000e-2327.15Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024GAF6_9STRA2.800e-1726.91Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
F0W093_9STRA6.550e-1725.30Uncharacterized protein AlNc14C4G535 n=1 Tax=Albug... [more]
A0A0P1ANE9_PLAHL7.300e-1624.68Arf-gap with coiled-ank repeat and ph domain-conta... [more]
A0A484EF15_BRELC5.620e-1222.36Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A7S4A3T2_9STRA3.210e-1028.85Hypothetical protein (Fragment) n=1 Tax=Pelagomona... [more]
A0A8J2WJQ7_9STRA3.790e-1028.85Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
D0N718_PHYIT6.120e-1027.65Uncharacterized protein n=1 Tax=Phytophthora infes... [more]
A0A5D6XPU4_9STRA9.670e-1029.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6070contigEcto-sp13_S_contig6070:540..7547 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score460.7
Seed ortholog evalue7e-127
Seed eggNOG ortholog2880.D7FY51
Model size1191
KEGG koko:K12491
KEGG Pathwayko04144,map04144
Hectar predicted targeting categoryother localisation
Exons8
EggNOG free text desc.GTPase activator activity
EggNOG OGsCOG5347@1,KOG0705@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-24_003780.1
Cds size1191
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6070.16720.1prot_Ecto-sp13_S_contig6070.16720.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6070 540..7547 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463845.742449-CDS-Ecto-sp13_S_contig6070:539..7091681463845.742449-CDS-Ecto-sp13_S_contig6070:539..709Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 540..709 -
1681463845.7528665-CDS-Ecto-sp13_S_contig6070:1380..14841681463845.7528665-CDS-Ecto-sp13_S_contig6070:1380..1484Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 1381..1484 -
1681463845.761475-CDS-Ecto-sp13_S_contig6070:2572..26651681463845.761475-CDS-Ecto-sp13_S_contig6070:2572..2665Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 2573..2665 -
1681463845.7700944-CDS-Ecto-sp13_S_contig6070:3319..34121681463845.7700944-CDS-Ecto-sp13_S_contig6070:3319..3412Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 3320..3412 -
1681463845.7785513-CDS-Ecto-sp13_S_contig6070:3757..38681681463845.7785513-CDS-Ecto-sp13_S_contig6070:3757..3868Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 3758..3868 -
1681463845.7870102-CDS-Ecto-sp13_S_contig6070:5419..54871681463845.7870102-CDS-Ecto-sp13_S_contig6070:5419..5487Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 5420..5487 -
1681463845.7953432-CDS-Ecto-sp13_S_contig6070:5955..61131681463845.7953432-CDS-Ecto-sp13_S_contig6070:5955..6113Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 5956..6113 -
1681463845.803951-CDS-Ecto-sp13_S_contig6070:7153..75471681463845.803951-CDS-Ecto-sp13_S_contig6070:7153..7547Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6070 7154..7547 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6070.16720.1

>prot_Ecto-sp13_S_contig6070.16720.1 ID=prot_Ecto-sp13_S_contig6070.16720.1|Name=mRNA_Ecto-sp13_S_contig6070.16720.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=397bp
MSVPPGKSTSQATNGSNSGVRGSGGGGADKTAADDDTLNLTEVLEERELL
KSRVFELENRLRETEEELEYYFEFFKKTKRGGRASAAAAAAGGRTDGQQQ
RQQQQQPGRKNSDDSSSSSLDGEAPSNVNYTAEPWSKTLGRNAALEYSRD
SPMFRKRMWAFQDTLKPLQGHTTRILARADEYCQAGEEFRQKGVSLAEEL
YSKEASRVMFSNNFIAEGIGDLAANMFRFTTALKQVHELVALLVDSVKSG
LAAPLHDFNEGFRDLDDLADELDIRGREYESTLSKALDQRELPTEGPLHD
KAARARWDFELFRFDVVRYMNQLDSKKVLLLETGINNTFYALLAFFQGGG
SICGEMEKSMRRRQVVLDGMNKRHDRDNALWAYVRSRLEVKCIRCF*
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mRNA from alignment at Ecto-sp13_S_contig6070:540..7547-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6070.16720.1 ID=mRNA_Ecto-sp13_S_contig6070.16720.1|Name=mRNA_Ecto-sp13_S_contig6070.16720.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7008bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6070:540..7547- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGTGCCACCGGGCAAGTCGACATCACAGGCAACAAACGGCAGCAA
CAGCGGTGTACGCGGCAGCGGCGGCGGCGGTGCGGACAAAACTGCTGCTG
ATGATGACACACTCAACCTCACGGAGGTTCTTGAAGAGCGAGAGCTGCTC
AAGTCCCGCGTGTTCGAGCTGGAGAATCGCTTGCGAGAGACAGAGGAGGA
GCTGGAGTACTACTTCGAGTTCTTCAAGAAGACGAAAAGAGGAGGCCGTG
CTTCCGCCGCCGCCGCTGCAGCAGGTGGGAGGACTGATGGGCAACAGCAG
CGGCAGCAGCAGCAGCAGCCCGGGAGGAAAAATAGCGATGACAGCAGCAG
CAGCAGTCTCGATGGCGAGGCTCCCAGCAACGTCAACTACACTGGTGAGT
AAGTACACAAGCACTGCTGTGGCGTGGTTGGCGCTCGCCATTTGTTCCGC
AGTGAAGGTCTGTGCCTGATGGTTGTGCCTGCGGTAGACTTGTTCTCTCG
TGCCTGCCCCACATGCACGCCGCCCGACTGGTGCAGTGTGGCACACATGA
CAATCAGCGTTGGGGCGAGTTGGGTACCAAAATCTTGTCGGCGTAAGAGC
CCAAAACACGAAAGGGGGCCTCTGTTCAACAAATAACTCAACCTCTTCAT
CACACTTGCGACTGCATTCAAAGAGAGAGGTATGTCTCATGTGCACAAAT
GGCCCCGAGGAAAGAAGTCAGGGGGAGATTTGTACAGTGTAGATTGGTGC
CAGAGTCCATGGGACGAAAACACCCACGCCGAGACTCATCGGTCATCCAG
TTGGCGCGGTCGATTCAAAAATGGCAAGACACTCACGTGTTGTGTATCCT
ACGCAGTTGTAAATAGTCTTTCCCCCGAGGTTGGCCTCCCTTCGTGCGTA
CCCCTTCAACTATCCGCACTGGAAACACCACCGAACTAATTGGCGCCGTT
CAGTCCGTTCGAGCCGGTGGCTTTCTCTCTCTGTCGAGTGTTGTAGGAAC
AAGAAAACTGCTGTGCAGATGGCATAGTTTGCTACGCATGAAGAGAGAAC
AATGTCATGGTCTACACCAACGTGTCCCTGAAACCTAACACTCGAGCGCA
CATGTCGACAAAATATTGCGGCTACTCGGCTCTATGCGCTTGTCTCGTTC
TGCTGTATACGGTTCGACAGCTCCTGCTCGTACTCTGTGCAATGTGACAC
GCGCATTATTAGAACCTTTGATCGGCACGAGGCTCTGTACTTATTTCTCC
TTCTGGAACCCCGATATCGACAAAATTGATTTCAGCGTGGGAGTATTTAG
GGAGCATCTGTGTTTATGGTTCCTGTTTTGTGTACCTACAGGCCTCTTTG
CTCTCAGGTTGCACATTTGTAGCGCATACTTTGTATTCGGGGCACTCATT
CCCTTGAGTCATCGCCGATTTTTTTTATGCCAAGCAGAGCCGTGGTCGAA
GACTCTCGGGCGCAACGCGGCTTTGGAGTATTCAAGGGACAGCCCGATGT
TCCGAAAACGCATGTGGGCATTCCAGGATACGCTCAAGCCGCTGCAGGGG
CACACGACGAGGATTCTCGCGCGCGCTGACGAGTACTGCCAGGTGCGGTG
TGTTGCTGTTTGCTGCCATTGCTCCGGACATTTAGTTGGCACTATTCGGT
ACATCCATGGGATGACAGGTTTTTGGTGTATGGTATTTTTTTGTTCCGTC
GCCGCGTTTGCTTTGATGTGTTTAATGGGCTGTGATTCCACTTGGGTGCC
AGTGTATTTATGCCAGACGCTGCTGCAGTGCTAAGGGAGAGCTTTTTGTA
CGGGATGCCGTGAGTTTGGCGTCGTCCTTGTCACGGATAGGTGGGGTGTG
TTACTCAGTTTGGCGTGCTGGAATTGTCAATAAATCGAAAATATTGCCGC
ACACCACAAAAGAATACCGCCCGTACCTACCGCAAGGTTGTTTCCAATTA
TGCAGAAGGAAGATGACGTTGGAATATCACTTATTGCCCGTGCTTACCCC
CAGCAATATGCGTGTTGCTTTCTGCCTATCGCTGTCTTTTGTTGGGGGGC
TACTTGGCAGGCGGGGGAGGAGTTCCGTCAGAAGGGCGTTTCCCTTGCGG
AGGAGTTGTACAGCAAGGAGGCGTCCAGGTGAGATAAAACTGCGCGCAAC
CAAAGTCAGTTGAACTCAACCTCTCTCCGAGCAATACATCGTAAGAGGCT
CTCGGTCGGGAGGTACCTTGAATGACACAAGATAACACACCCCTTGGACT
GATTTTATAAAAGCTCGATTCATCAACAGCAGGAAGAGCCACGGCGCCGA
AAACGGCGGCGTCGAAGCCGTCTGGTCGAGAGCTCTCCGAAAACGCATCG
TTTCGTTGAAACCTTTCGTTGAAACGTCATGGAGTAATCGAGCTTTGGAA
ATTTGTCCAGGGGGTGTGTTATCTTGCGTCGTGTACGGTAGGCGGGCTTG
CCTCGTGGGGGCGATGCAAGAGCACACGGCCACTGCTCTCATGGTTGCAT
CGTTGTATATCTCAACCTTCGGTAGTGCCACGGTTGGCTTCGGTACAAAC
TGCAGAATATAAGTCAAACCAATTTGCGGGGAAACGTTTTTTTTTCCGTG
AGACTGCTCGCGTGCGCTTGTGGTGTCTTTGCCGTAGATCCTACATACTG
CACCTACTTCTGTTAACACAGACTGCTGCTGTGTTCGTCAGCTACTTCAT
TCTTGTCGGCGAGTATTCGTGTATTTGTACGGTCATCGCTAGGAGATTTC
TGCGTAGATTCTCTTTGCCCAGTCCGGGTAAAGACATTTCCTCTTGGGAG
TACCCCGGCGGATAATCGGCAATCATTTGTAGCCGGTGTCGTTGCCTATT
TGTCCGTGTTGTCCGCCGTGTAGCAGTTGAAGCGGTGAGTCCCGAGCACA
CACACGATAGGGTAGCGGCATCTTTACGGTAGATCGTACTGCTGTAACCC
GCTGCTCTTGCCCTCTCTCTCTCCGTCTTGTGTTTTGTACCTCGTTGCTC
ATGGTGTGGGAAACGTGTGTGCTAGGAGAGAGAACGTCAAAATGGTCCCG
TACTGATGAATACTATTGTTGTACATCCTGCGAAGGCTTTATGGCGCGGA
ACATGTCCCCGGGAAAAAAGTCAGTTTTTCCAACTTTGGACCTTGAGCAC
ACGCGCGACGGGTGGCTGGCGGTCCTCGGTTGTGCGCGGTATTGTACCGA
CGACCCCCCTGCGTGCCCCTGAGAAGGAAGCGTGAGAAAAGATTGACTTC
CTCCAACGAAGTATGTCCCGAAGCGCGAAAACAGGCGAAGCGACACATGC
ACATATATTCGAGCCTTGGGCGTGTATGCTGCACTGCCTGCAAACCAAGA
GAATCGACATTAGCAACACATGGAGACTTGTGGATGTGTGTGTTGCGCTG
GCCCGTTGTTTCTGCAACCTTCGTTTTTCTTGTCGATGATGTACAGATGT
TTGCAAAGCTTCCCGAACTTTATTTCGAAACCATTCGACAAGGTGTTCAA
AAAGTGTCACCCCAGTAGTTACTGCAACGACTCCGATCCCTCTATCTACC
TTGGTTGTGGATTGGTCCTCTGTCGCAAGCTTCGTTTGCCGCTCGCCCCT
TGCTTACGCCGCCGCGCCTCTGCTGATATGATGTGTCTCCCGATGTAATC
GTTTCCTCTCGCGGATGCGTTCCCGGCAGGGTGATGTTCAGCAACAACTT
CATCGCGGAGGGGATAGGAGACCTAGCGGCAAATATGTTCCGCTTCACCA
CGGCGCTCAAGCAAGTCCACGAACTTGTCGCCCTCCTCGTGTAAGTTTTT
TTTTTTTACTCGTTTCTATGTTTCCATCGTGGTGTGTGTGGTCGTGGTGC
CAGATGAGAGGGCAGCACTCTGAATCTCTCCGCACCGTTTCTCTCCGCTG
GTGTTTGCCAAACTCCCCCGGTTTAAGGTTGAGTGTGTTGCTATTGTTTG
CCGACTTTCGTCACCACCATAGTCACGAATCTCGTGGTCAGTGCTGCTCA
CGGTTGTATCGCTGTCGCTGTCGTCGGCATTGCTTACTTTTCACTTTTTT
TTTTTGCTGCCCTTGAGGACCGGTACACTGCAGATTTCAAACAAGTATTT
CCCCCTTTTTTCTCTGGCGAACTTTCCATCCGCAGTGACAGCGTCAAGTC
CGGTCTGGCGGCACCCCTTCACGACTTCAACGAAGGCTTCAGGGATCTTG
ACGACCTTGCCGACGAGCTCGACATCAGGTGACCATCGTACAATAGCGCC
TCGACTACAACACTACGTAGGTCGTTCTAGAAAAGCTGGGTGCTTCGAAC
GACTGCGCCCTGATTTGGGACCTTAAAAGGAGCTCTCCCCAACCGTAGAC
AGGATTTGGTTGAGAAGGAAGCCGGTTTGGGGGTGATCATCGATCTCTAC
TAGCTGGTTGCTGCTGCCGAGTTTTCGTCACCGCTTTCTACCTGTTTGCT
TATTTTTTTGCCCTGTTTTTTTTATTTTGTAGCGGTTGTCAAGCAGCCCG
GCTACTTGTTTGCTTTGTCGCACACCCTCAAGCATGGCGTGTATCCATCC
GCTTGTCGACGGACACATGCAATGACCGAGGCTCTGCCACACGCGTTGAT
CCAAGAGCACCCTTCATTTTCAATAAGCTCGCTTCCCTGCTTTTTTTTGC
TGCATCTTCTTCGAGCTCCCGCCTGTGAACCGATGAGTGCTGTCTTTTTG
TTTTCTTGGTAGTGGCTTCGGCAGAGGCGCTAACTCGCCGGCCTTTGTGC
GTGTGTGGTGCGTTGAGTTGTTTCATGTCCCCGACTCGTTTACGGCTCCT
CAGTTTCAGAGAGGATGCGTATTTTTTGGAAGCCAACTGACCCTACATTC
CTGTGTTTGTTGGATTTCTTGTTGTTTCGCAGAGGTCGCGAGTACGAGAG
CACGCTGTCCAAGGCACTGGACCAGAGGGAGCTGCCGACGGAGGGGCCGC
TGCACGACAAGGCTGCCAGGGCAAGGTGCGGTGGACGTATGGCAAGCGTT
CGGCTGACATTTTAAACGTCACCGGTGGTTGATCGAATTATCTGCCTCAA
GAGAGGTTTTTGGCAGACGATTTTTGTACTGGCGACCACTGGTAGGCCGT
TGGTTCCGACAGCGATGCCTCTGGTTTGGTAGCCCCTGTCGCACACGATA
CATGTAGTACAGGGAGTCGGTGGCACTGAAGGAAAAAGGAAGGTGCTGTT
TTTTTTGTATGGTGTGCGTACTTCCAGACCCGGGTAAGCACAATGAGGGG
CACCGCAGTCTGAATCGCCGTCCGAACTCACCCCGCCTATTTATTTTAGT
TTTTCCAGGCCGCACGTGTTTGGGGGTGATCGATGGACGCGACCGGGCCA
GGTTTATAGGTGCAAGTTTGCCCAGTGTGGTGTGTTCCTGTATGCAATGC
CATGAAAGGCCTCTGCTGCTCCTGGCAAACTAAAGTGGCCCAATTGAACA
ATATTTAGCAACAGGGGAGCATTGTGTTGCCGCGCGTCACGGATTTTGAG
AAGATTTGTTTTGCTGGGACCTGGAACAAGAGCAAGCCGTTACCTCAAGA
AACGCAGTCCTTGGCAAAACAAAGGTTGATGTGGTACGGAATTCCATCCA
GATGTGAGTGCGGTGAGAAGTCACAGGCCATATGCACAAATCAAATCGTC
CGGTTCCTTCGCTTTGCGATTTTTTCCCGGCAGCATCGTGCGCTCGTCCC
GGATATTATTTTTTTGGTGCTTGCTAGTGCAGGACACCGCTGTAGGGTGT
TTGGGCGGTGGCAGTCATCTTGTTCGGCTTGAAGGCCGAAAGCGGCAAAA
ATCCGGATCGCAACAAGCAATGTCAATATCAACGAGTGAAAATGACGTTC
AATGACCTTCACAATGAACTTTCACGCGTTGCTGGTTGAACGCGATGCTT
CCCAGCAGTAAGTAGCGATACCCACCCCCGTAGCCGATGAATTTTCGGTC
CTGGAAATGAAAACACGCACATGCTGCATCAATGATTTGCCCTTCGTGGA
GTGTGTACAATCTGTTAAAATTTGCTTCTGCGAATGATCCGTGCGTGCAT
CGACGCTCATCAGGTGGGACTTCGAGCTGTTCAGGTTCGATGTGGTTCGC
TACATGAACCAGCTGGACTCGAAGAAGGTGCTCCTCCTGGAGACCGGGAT
AAACAACACCTTCTACGGTACGTTCCGCCGGAATGGTGGTGGGTAGTACA
TCACCACCGGGGTGCCCGCGATGTAGCAACAATGTTGGCGTTTTTGTTCC
TGAGACTATTTCGTTGGCAGGCAAGCCGCTTCTCGCAGTCGGTGTTAAGA
AACGAAACACACGGGTGCTACCCTTTCTGTCGTTCATCCGGAGAGGAGTT
TGGCCTCCCCCATGACAGGGTCCCAGATCATGGCCTTTTGAAGTTTTTGC
TGCTTTTGCCGCGCTGGTCTGCTCGTTAGCGCCGTAGGTTTCACGAAAAC
ACACGCACACACTCACACACGTGCGCACAAGGGGGGGACCTTCGCGAGCC
GGACCTCCCCCTCTTTATTGTCGCTGCGATCAACATACTTTCGACCGTGA
ACCAGTTGGCCTGCAACGTCTGCGCCGATGCAGCAACGTGCTAACGGCGT
GTCATCATCATCGTGTTAGTATGCTTTTCTGTTTTATCGCCCGTTGTTCT
TTCCTCCATGTTTTCCTCGGCCGTCAATATTTTGTTTGTTTCATTTTCAG
CACCACAAGAATAATAGAAACCGCCGATGGAATCTAAAGAAAAATACTGT
TTTGAGAAGCACAATAGAGATCACAACAAGAGCCTTACACCTGAAATCGT
GTTGATCAACGTGGGGGGGGGGGGGTTCCTACAACCAGCGCTGCTGGCGT
TTTTCCAAGGCGGAGGGTCAATCTGCGGGGAGATGGAAAAGTCGATGCGT
CGGCGACAGGTCGTGCTGGACGGAATGAACAAGAGACATGACCGGGATAA
CGCCCTGTGGGCCTACGTCCGCTCTCGCCTGGAGGTAAAATGCATTCGTT
GTTTTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6070:540..7547-

>mRNA_Ecto-sp13_S_contig6070.16720.1 ID=mRNA_Ecto-sp13_S_contig6070.16720.1|Name=mRNA_Ecto-sp13_S_contig6070.16720.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1191bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6070:540..7547- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGTCGGTGCCACCGGGCAAGTCGACATCACAGGCAACAAACGGCAGCAA
CAGCGGTGTACGCGGCAGCGGCGGCGGCGGTGCGGACAAAACTGCTGCTG
ATGATGACACACTCAACCTCACGGAGGTTCTTGAAGAGCGAGAGCTGCTC
AAGTCCCGCGTGTTCGAGCTGGAGAATCGCTTGCGAGAGACAGAGGAGGA
GCTGGAGTACTACTTCGAGTTCTTCAAGAAGACGAAAAGAGGAGGCCGTG
CTTCCGCCGCCGCCGCTGCAGCAGGTGGGAGGACTGATGGGCAACAGCAG
CGGCAGCAGCAGCAGCAGCCCGGGAGGAAAAATAGCGATGACAGCAGCAG
CAGCAGTCTCGATGGCGAGGCTCCCAGCAACGTCAACTACACTGCAGAGC
CGTGGTCGAAGACTCTCGGGCGCAACGCGGCTTTGGAGTATTCAAGGGAC
AGCCCGATGTTCCGAAAACGCATGTGGGCATTCCAGGATACGCTCAAGCC
GCTGCAGGGGCACACGACGAGGATTCTCGCGCGCGCTGACGAGTACTGCC
AGGCGGGGGAGGAGTTCCGTCAGAAGGGCGTTTCCCTTGCGGAGGAGTTG
TACAGCAAGGAGGCGTCCAGGGTGATGTTCAGCAACAACTTCATCGCGGA
GGGGATAGGAGACCTAGCGGCAAATATGTTCCGCTTCACCACGGCGCTCA
AGCAAGTCCACGAACTTGTCGCCCTCCTCGTTGACAGCGTCAAGTCCGGT
CTGGCGGCACCCCTTCACGACTTCAACGAAGGCTTCAGGGATCTTGACGA
CCTTGCCGACGAGCTCGACATCAGAGGTCGCGAGTACGAGAGCACGCTGT
CCAAGGCACTGGACCAGAGGGAGCTGCCGACGGAGGGGCCGCTGCACGAC
AAGGCTGCCAGGGCAAGGTGGGACTTCGAGCTGTTCAGGTTCGATGTGGT
TCGCTACATGAACCAGCTGGACTCGAAGAAGGTGCTCCTCCTGGAGACCG
GGATAAACAACACCTTCTACGCGCTGCTGGCGTTTTTCCAAGGCGGAGGG
TCAATCTGCGGGGAGATGGAAAAGTCGATGCGTCGGCGACAGGTCGTGCT
GGACGGAATGAACAAGAGACATGACCGGGATAACGCCCTGTGGGCCTACG
TCCGCTCTCGCCTGGAGGTAAAATGCATTCGTTGTTTTTGA
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