prot_Ecto-sp13_S_contig6065.16715.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6065.16715.1
Unique Nameprot_Ecto-sp13_S_contig6065.16715.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length128
Homology
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BLAST of mRNA_Ecto-sp13_S_contig6065.16715.1 vs. uniprot
Match: D7G6I0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6I0_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 1.270e-74
Identity = 123/128 (96.09%), Postives = 126/128 (98.44%), Query Frame = 0 
Query:    1 MECDNPAVVSTLARKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSAGVTANHPLLPPPEKLFGFTYVSFFIEKTTFPASKHNAVMDLTTPTPNVGAFSAMTGTFNFDAPPSVGGRAGGSGVRET 128
            MECDNPAVVSTLARKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSAGVT N+PLLPPPEKLFGFTYVSFFIEKTTFPASKHNAVMDLTTPTPNVGAFSAMTGTFNFDAP SVGGRAGG+GVR+T
Sbjct: 1585 MECDNPAVVSTLARKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSAGVTTNNPLLPPPEKLFGFTYVSFFIEKTTFPASKHNAVMDLTTPTPNVGAFSAMTGTFNFDAPRSVGGRAGGTGVRDT 1712
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BLAST of mRNA_Ecto-sp13_S_contig6065.16715.1 vs. uniprot
Match: A0A6H5L704_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L704_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 1.320e-72
Identity = 118/128 (92.19%), Postives = 122/128 (95.31%), Query Frame = 0 
Query:    1 MECDNPAVVSTLARKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSAGVTANHPLLPPPEKLFGFTYVSFFIEKTTFPASKHNAVMDLTTPTPNVGAFSAMTGTFNFDAPPSVGGRAGGSGVRET 128
            ME DNPAVV TL RKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSAGVTAN+PLL PPEKLFGFTYVSFFIEKTTFP+SKHNAVMDLTTPTPNVGAFSAMT TFNFDAPPSVGGR GG+GVR+T
Sbjct:  314 MEYDNPAVVFTLERKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSAGVTANNPLLSPPEKLFGFTYVSFFIEKTTFPSSKHNAVMDLTTPTPNVGAFSAMTKTFNFDAPPSVGGRPGGTGVRDT 441
[Close]
BLAST of mRNA_Ecto-sp13_S_contig6065.16715.1 vs. uniprot
Match: A0A835ZQ73_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ73_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.860e-10
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 0 
Query:    5 NPAVVSTLARKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSAGVTANHPLLPPPEKLFGFTYVSFFIEKTT 79
            N A  + LA KGGD++L RP DG+SV+  +++  + + L+ Q      T   PLL PPEKLFGFTY+S  +E+TT
Sbjct: 1586 NAAAAAVLAWKGGDLSLARPADGKSVV-DIVKGERELALLMQ-KHFHPTERAPLLAPPEKLFGFTYLSLLLERTT 1658
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6065.16715.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G6I0_ECTSI1.270e-7496.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L704_9PHAE1.320e-7292.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZQ73_9STRA5.860e-1046.67P-loop containing nucleoside triphosphate hydrolas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6065contigEcto-sp13_S_contig6065:3897..6693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6065.16715.1mRNA_Ecto-sp13_S_contig6065.16715.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6065 3897..6693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6065.16715.1 ID=prot_Ecto-sp13_S_contig6065.16715.1|Name=mRNA_Ecto-sp13_S_contig6065.16715.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=128bp
MECDNPAVVSTLARKGGDVNLKRPCDGRSVITQVLEQGQGMDLIEQVSSA
GVTANHPLLPPPEKLFGFTYVSFFIEKTTFPASKHNAVMDLTTPTPNVGA
FSAMTGTFNFDAPPSVGGRAGGSGVRET
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