mRNA_Ecto-sp13_S_contig6063.16713.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: D8LRD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD9_ECTSI) HSP 1 Score: 319 bits (818), Expect = 1.670e-99 Identity = 161/173 (93.06%), Postives = 162/173 (93.64%), Query Frame = 1
Query: 148 MATGGEVVLRLALLLMPLATKPLLAAAQPMFTSSSACEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSSSPAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAIDPF 666
MATGGEVVLRLA LLMPLA PLLAAAQPMFTSSS CEQGHFCT GVKLPCAPG FGS TEETSFLCSGLCPAGSFCPEGSSSPAPCGN+SVYXXXXX PIVVS GNY VGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAIDPF
Sbjct: 1 MATGGEVVLRLAFLLMPLAITPLLAAAQPMFTSSSGCEQGHFCTNGVKLPCAPGRFGSSTEETSFLCSGLCPAGSFCPEGSSSPAPCGNNSVYXXXXXXXPIVVSHGNYAVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAIDPF 173
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: A0A6H5JB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB52_9PHAE) HSP 1 Score: 288 bits (737), Expect = 3.560e-95 Identity = 147/173 (84.97%), Postives = 148/173 (85.55%), Query Frame = 1
Query: 148 MATGGEVVLRLALLLMPLATKPLLAAAQPMFTSSSACEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSSSPAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAIDPF 666
MATGGEVVLRLALLLMPLAT PLLAAAQPMFTSS+ACEQGHFCT GVKLPCAPG FGS TEETSFLCSGLCPAGSF SSSPAPCGNSSVY S PIVVSPGNY GGTSASGRIEQAVCPKG YCRQGLA LCPAGTFGEREGLHDDACSGP PPGAIDPF
Sbjct: 1 MATGGEVVLRLALLLMPLATTPLLAAAQPMFTSSAACEQGHFCTNGVKLPCAPGRFGSSTEETSFLCSGLCPAGSFXXXXSSSPAPCGNSSVYCPAGSSRPIVVSPGNYAAGGTSASGRIEQAVCPKGWYCRQGLAKLCPAGTFGEREGLHDDACSGPXXXXXXXPPGAIDPF 173
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: A0A6A4ZQN3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZQN3_9STRA) HSP 1 Score: 119 bits (298), Expect = 5.670e-28 Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 1
Query: 256 CEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSS--SPAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGA 654
CE+G +CT G K C+ G +G+ T+ LCSG CP G +CPEGSS S C + SV+ STP++VS G +++ G RI Q +CP G YC +G+A LCP GTFG GL+ CSG C G CP G+
Sbjct: 202 CERGMYCTQGQKRKCSSGTYGATEGLTTALCSGTCPVGYYCPEGSSDYSHFACLDPSVFCPPGSSTPVLVSSGYFSLLGVDGRLRIGQQICPAGSYCVRGVAHLCPLGTFGSSTGLNSTMCSGRCAPGSVCPRGS 336
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: W4GA05_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GA05_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.830e-27 Identity = 65/152 (42.76%), Postives = 88/152 (57.89%), Query Frame = 1
Query: 205 TKPLLAAAQPMFTSSSACEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSS--SPAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGA 654
T+ L AA + + CE+G +CT G K C+ G +G+ T+ LC+G CP G +CPEGSS S C + SV+ STP++VS G +++ G RI Q +CP G YC +G+A LCP GTFG GL+ CSG C G CP G+
Sbjct: 301 TQALTAAT--IRVNQQICERGMYCTQGQKRKCSSGTYGATEGLTTALCTGTCPVGYYCPEGSSDYSHFACLDPSVFCPPGSSTPVLVSSGYFSLLGVDGRLRIGQQICPAGSYCVRGVAHLCPLGTFGSSTGLNSTMCSGRCAPGSVCPRGS 450
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: A0A662X7X4_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7X4_9STRA) HSP 1 Score: 107 bits (267), Expect = 3.730e-23 Identity = 61/143 (42.66%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 256 CEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSSSPA------PCGNSSVYXXXXX-STPIVVSPGNYTV--GGTSASGRIEQA----VCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCP 645
CE G+FCT G+K C G +G+ + + CSG C AG +CP P+ CGN+SVY +TP +V G ++V GG GR +CP+G YCRQG+ CP GT+G EGL ACSG CPAG++CP
Sbjct: 903 CEPGYFCTNGIKYQCPAGTYGASSGLATPRCSGQCAAGYYCPSYPELPSVSSRQKECGNASVYCPEGTGNTPKLVPSGYFSVLTGGPVDDGRNATQSGVEICPRGFYCRQGIRIRCPEGTYGNEEGLSAAACSGWCPAGFFCP 1045
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: A0A2D4BTE1_PYTIN (Cellulose synthase 3 n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BTE1_PYTIN) HSP 1 Score: 106 bits (265), Expect = 7.350e-23 Identity = 66/170 (38.82%), Postives = 88/170 (51.76%), Query Frame = 1
Query: 220 AAAQPMFTS---SSACEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSSSPAP------CGNSSVYXXXXX-STPIVVSPGNYTVG---GTSASG----------RIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAID 660
AAA P ++ CE G FC G K C G FG+ T ++ CSG C AG CP +P+ CGN+SV+ + P +V+ G Y+ G G+ G R +QA+CP+G YCRQG+ CP GT+G+REGL C+G CP G+ CP G D
Sbjct: 1641 AAADPTNSTRFHQRPCEPGFFCVNGTKFQCPEGTFGATTGLSTAACSGRCRAGYRCPSYPFAPSTSATQELCGNASVFCPEGTGNAPRLVASGFYSTGAGDGSDQEGTPEAAQTNATRTDQALCPRGFYCRQGIRIRCPPGTYGDREGLVSTQCAGWCPPGFACPTGTSD 1810
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: A0A2D4CF56_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF56_PYTIN) HSP 1 Score: 104 bits (260), Expect = 2.020e-22 Identity = 55/139 (39.57%), Postives = 73/139 (52.52%), Query Frame = 1
Query: 241 TSSSACEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSSS--PAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPG 651
++ CE+G +C GVK C G +G T+ CS CP G FCP G++ PC + + + P VS G +TV + R++Q +CP G YC G+A LCPAGTFG GL CSG CP G+ C G
Sbjct: 306 SAQRVCERGTYCVAGVKRWCPAGTYGDTEGLTTPQCSSPCPPGFFCPLGTAQFDKNPCNDRQSFCRQGSAVPTPVSAGYFTVTAATGDVRVDQQICPVGSYCVNGIAYLCPAGTFGATTGLATPQCSGRCPDGYTCAAG 444
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: UPI0007116385 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007116385) HSP 1 Score: 102 bits (254), Expect = 2.260e-21 Identity = 61/138 (44.20%), Postives = 74/138 (53.62%), Query Frame = 1
Query: 256 CEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSS--SPAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSAS--GRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAI 657
C G +C G C PG +G +S CSG+CP G +CPEGS+ S PCG+ VYXXXX +PI V P + G S + R E CP G YC G CP GT+G GL CSG CP G+YCP G +
Sbjct: 605 CPIGSYCVNGSLYSCPPGVYGLVEGLSSSSCSGVCPPGFYCPEGSTDYSNHPCGSVDVYXXXXSDSPIPV-PDGFISGPLSVNVTNRYEIVACPPGHYCVSGNMEECPPGTYGNITGLSSSTCSGLCPLGYYCPTGTV 741
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: T0QID9_SAPDV (Ephrin_rec_like domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QID9_SAPDV) HSP 1 Score: 100 bits (250), Expect = 6.740e-21 Identity = 56/137 (40.88%), Postives = 68/137 (49.64%), Query Frame = 1
Query: 256 CEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSSSPAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAIDPF 666
C G +C C G FG+ T + CSGLCPAG +CP G++ P CG +Y + P +V PG Y +G A+ R A+C G YC G C GTFG GL ACS CP G YCP GA P
Sbjct: 44 CPTGSYCRNNRLTRCPAGFFGNVTGLQTPQCSGLCPAGFYCPLGTAEPIACGGQHLYCALGAAAPSLVPPGYYALG-IDATRRESVALCEAGFYCVNGQLLPCVEGTFGSTSGLTSPACSDVCPPGSYCPLGASAPL 179
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Match: A0A1V9ZJ39_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZJ39_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.330e-20 Identity = 54/140 (38.57%), Postives = 71/140 (50.71%), Query Frame = 1
Query: 244 SSSACEQGHFCTYGVKLPCAPGGFGSYTEETSFLCSGLCPAGSFCPEGSS--SPAPCGNSSVYXXXXXSTPIVVSPGNYTVGGTSASGRIEQAVCPKGRYCRQGLATLCPAGTFGEREGLHDDACSGPCPAGWYCPPGAI 657
S + C +G FC G K C PG +G ++ +CSG CP P+GS+ S C S Y + PI V+ G +T R+EQ +CP G YC G+A LCP G++G GL CSG C G CP G+I
Sbjct: 305 SQAICAKGTFCVNGQKFLCPPGTYGDTLGLSTPMCSGACPXXXXXPQGSTGYSANACVEPSSYCPGNTAAPIAVTTGYFTTLSYDGRLRVEQTICPIGSYCVNGIAHLCPWGSYGAVTGLSSSVCSGNCAPGAICPRGSI 444 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6063.16713.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6063.16713.1 >prot_Ecto-sp13_S_contig6063.16713.1 ID=prot_Ecto-sp13_S_contig6063.16713.1|Name=mRNA_Ecto-sp13_S_contig6063.16713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=222bp PREPTIISYCYATFYSFEFDRASPTCCVLYLSAHTWITDGNSRPLPLATMback to top mRNA from alignment at Ecto-sp13_S_contig6063:3940..6616- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6063.16713.1 ID=mRNA_Ecto-sp13_S_contig6063.16713.1|Name=mRNA_Ecto-sp13_S_contig6063.16713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2677bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6063:3940..6616- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6063:3940..6616- >mRNA_Ecto-sp13_S_contig6063.16713.1 ID=mRNA_Ecto-sp13_S_contig6063.16713.1|Name=mRNA_Ecto-sp13_S_contig6063.16713.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=666bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6063:3940..6616- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |