prot_Ecto-sp13_S_contig606.16706.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig606.16706.1
Unique Nameprot_Ecto-sp13_S_contig606.16706.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length416
Homology
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: A0A6H5KVF3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVF3_9PHAE)

HSP 1 Score: 266 bits (679), Expect = 2.040e-79
Identity = 164/375 (43.73%), Postives = 216/375 (57.60%), Query Frame = 0
Query:   23 CTAETLLPV-AAPLVVGDELCDGTRDSITLTGDLVLASSGRAF--DVGMWIG---PIGDDPLCTRYGFKCEDQDAVGFDI---DGDGCADFEEVNDGGDNVRAFRGVSWTAPCKGNDVGDFLLDLCLTWKTADGNTD-CTDIDGIVSLPGVECICGEASFDV--IKVCPT--DLTVTTSTSTSLCLGDGVDVTIDIPDIPTDADIEYVIKDEDG--NEVS-SGQLAGTTTLAVPEPLVPDVDYTIDVTLSFASVGLECATLSFDLEPICSCGENNANCVCNPATDVDCPSGDLICCKERDVCDEFSTGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIADSNMNVNMRVTSPVAELPEITYITGSRTLIPHT 380
            C+    LP  A  +V   +LCDG+  S+T  GDL   S+G     DVGMW+G   P G    C  YGF+C   D   FD+   D D CAD ++       +  F+G+ +T PC+GN+ G+ ++  C++ KT+  + + C   D I   P  +C C EA   +  +KVCP    ++VT S    +C+GDG D  +   +IPT A + Y I  +DG  N V   G L GTT     E L P ++Y I++ ++F +   +C T++  L P CSCGE+             CP G LICC+++D CD F   +  G  CGDPHMTGFLGQKFDFTGEDGGWYSVIADSNMNVNMRVTSPVA+LPEITYITG   L   T
Sbjct:   30 CSCFRQLPANALDVVPPSQLCDGSVTSVTFKGDLTFDSTGNGGRQDVGMWLGEFNPPGGQ--CRVYGFQC---DGTEFDLENYDDDICADVQQ------GLTKFKGIEFTVPCEGNEAGELVVPYCVSAKTSGQDIEECKTTDDIFPGPDSKCKCPEAPLVISALKVCPDLETISVTPSLVGDVCVGDGSDFLLTFENIPTAAGVSYTIAAKDGSLNIVDIDGDLDGTTAT---ENLYPTIEYDIELAIAFENDKPDCGTVTLGLNPTCSCGESG------------CPDG-LICCEKKDYCDVFGDESVDGVICGDPHMTGFLGQKFDFTGEDGGWYSVIADSNMNVNMRVTSPVADLPEITYITGLSVLTTDT 377          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: D8LHI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHI6_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 3.020e-24
Identity = 90/292 (30.82%), Postives = 126/292 (43.15%), Query Frame = 0
Query:    5 CSNTDTFSGQVECLN---AGSCTAETL-LPVAAPLV---VGDELCDGTRDSITLTGDLVLASSGRAF--DVGMWIGPIGDDPLCTRYGFKCEDQDAVGFDIDGDGCADFEEVNDGGDNVRAFRGVSWTAPCKGNDVGDFLLDLCLTWKTADGNTDCTDIDGIVSLPGVECICGEASFDVIKVCPTDLTVTTSTSTSLCLGDGVDVTIDIPDIPTDADIEYVIKDEDGN----EVSSGQLAGTTTLAVPEPLVPDVDYTIDVTLSFASVGLECATLSFDLEPICSCGENNANC 283
            C+  +T SGQ +C++    G+CTA  + LP    L       +LCDGT+DSIT TGDL   S+G     DVGMW+G  G D  C  YGF CE+      D   D CAD ++ +        F GV +T      D+G                                                 ++VT S     CLGDG D  +   +IPT+AD  Y I   DG     +++      TTT+A    L+P + YTI V ++F +   +C  ++  L P CSC  ++ NC
Sbjct:   30 CTVAETLSGQADCIDPSAGGTCTAGDVDLPDDDALTNVQATTDLCDGTQDSITFTGDLTFLSTGNGDRQDVGMWLGDFGPDGTCDVYGFNCEEDTFDLEDNPTDICADVQQGS------TLFAGVQFT------DLGT------------------------------------------------ISVTPSLVAEPCLGDGSDFLLTFGNIPTEADASYTIAAVDGTFNIPDIAGSLTGNTTTVA----LLPTIAYTITVAVAFENNEPDCGFVTLPLNPTCSCSGDDENC 257          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: A0A6H5K7V7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7V7_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 4.450e-23
Identity = 68/134 (50.75%), Postives = 83/134 (61.94%), Query Frame = 0
Query:  243 VPDVDYTIDVTLSFASVGLECATLSFDLEPICSCGENNANCV-CNPAT-DVDCPSGDL-ICCKERDVCDEFSTGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIADS-NMNVNMRVTSPVAELPEITYITG 372
            V + D +IDV L     G    ++S+     C  G N+  C  C  AT D DCP+ +  ICC E  +C    T  D G ACGDPHMTGFLGQKFDF G+DG WY+V++D  ++ VNMRVTSPV   PEITYITG
Sbjct:   63 VCNYDISIDVDLVAFLAGTGDVSISW----YCDHGGNDGYCTTCTEATQDTDCPTDEKPICCPETGLCSHEPTDDDAG-ACGDPHMTGFLGQKFDFVGQDGEWYAVVSDMPDLEVNMRVTSPVPAEPEITYITG 191          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: A0A6H5JW46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW46_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.530e-21
Identity = 59/98 (60.20%), Postives = 71/98 (72.45%), Query Frame = 0
Query:  278 ENNANCVCNPATDVDCPSGDLICCKERD--VCDEFSTGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIAD-SNMNVNMRVTSPVAELPEITYITG 372
            + + +C C+   D  C +G L CC E D  VC +  T   G  ACGDPHMTGFLGQKFDFTGEDGG+Y++I+D  NM++NMRVTSPV  LPEITYITG
Sbjct:   48 DKDLHCPCD--RDDQCKTG-LKCCDETDPKVCKD-PTETSGPRACGDPHMTGFLGQKFDFTGEDGGYYALISDFPNMHMNMRVTSPVPSLPEITYITG 141          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: D8LGH7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGH7_ECTSI)

HSP 1 Score: 101 bits (251), Expect = 1.040e-20
Identity = 88/284 (30.99%), Postives = 123/284 (43.31%), Query Frame = 0
Query:    5 CSNTDTFSGQVECLN---AGSCTAETL-LPVAAPLV---VGDELCDGTRDSITLTGDLVLAS--SGRAFDVGMWIGPIGDDPLCTRYGFKCEDQDAVGFDIDG---DGCADFEEVNDGGDNVRAFRGVSWTAPCKGNDVGDFLLDLCLTWKTADGNTDCTDIDGIVSLPGVECICGEASFDVIKVCPTDLTVTTSTSTSLCLGDGVDVTIDIPDIPTDADIEYVIKDEDGNEVSSGQLAGTTT-LAVPEPLVPDVDYTIDVTLSFASVGLECATLSFDLEPICS 275
            C+  +T SGQ +C++    G+CTA  + LP    L       +LCDGT+DSIT TGDL   S  SG   DVGMW+G  G    C  YGFKCE+     FD++    D CAD ++ +        F GV +T      D+G                                                 ++VT S     CLGDG D  +   +IPT+A++ Y I   DG   +   +AG+ T     E L P + YTI V ++F +   +C  ++  L P CS
Sbjct:   30 CTVAETLSGQADCIDPSAGGTCTAGDVDLPDDDALTNVQATTDLCDGTQDSITFTGDLTFLSTGSGDRQDVGMWLGDFGPGGTCDVYGFKCEEDT---FDLESNPTDICADVQQGS------TLFAGVQFT------DLGT------------------------------------------------ISVTPSLVAEPCLGDGSDFLLTFGNIPTEAEVSYTIAAVDGT-FNIPDIAGSPTGNTATETLYPTIAYTITVAVAFENNEPDCGDVTLPLNPTCS 249          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 96.7 bits (239), Expect = 2.380e-18
Identity = 52/85 (61.18%), Postives = 62/85 (72.94%), Query Frame = 0
Query:  289 TDVDCPSGDLICCKERDVCDEFSTGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIAD-SNMNVNMRVTSPVAELPEITYITG 372
            T+ DC S + ICC  + VC E     D  TACGDPHMTGF GQKFDFTG+DG WY +I+D  +MN+NMRVT+PV   P+ITYITG
Sbjct:   27 TNTDCTSPE-ICCPVKKVC-ELPLPTDP-TACGDPHMTGFHGQKFDFTGDDGEWYCLISDLPSMNLNMRVTAPVPSRPDITYITG 108          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.220e-16
Identity = 52/119 (43.70%), Postives = 67/119 (56.30%), Query Frame = 0
Query:  273 ICSCGENNA-NCVCNPATDVDCPSGDLICCKERDVCDEFS-----------------TGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIAD-SNMNVNMRVTSPVAELPEITYITG 372
            +C+C E++    +C   T  DC      C +E   C++ S                       TACGDPHMTGF GQKFDFTG DG WY +I+D  +M++NMRVTSPV+  P+ITYITG
Sbjct:  714 LCTCRESDPFTALCGSGTGFDCLDSASDCVEEPTACEDDSDCTLPEECCLLKLVCEVADPTDPTACGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTSPVSSRPDITYITG 832          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 89.0 bits (219), Expect = 2.950e-15
Identity = 97/296 (32.77%), Postives = 128/296 (43.24%), Query Frame = 0
Query:  112 DNVRAFRGVSWTAPCKGNDVGDFLLDLCLTWKTADGNTDCTDIDGIVSLPGVECIC-----GEASFDVIKVCPTDLTVTTSTSTSLCLGDGVDVTIDIPDIPTDADIEYVIKDEDGNEVSSGQLAGTTTLAVPEPLVPDVDYTIDVTLSFASVGLECATLSFD--------LEP-ICSCGENN-ANCVCNPATDVDC--PSGDLI-----CCKERD------------VCDEFSTGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIAD-SNMNVNMRVTSPVAELPEITYITG 372
            DN R     S  A  +  D GDF+        + DG+T   D D  V   G   IC     G A  D   +   D+      +   C  DG D          + D    + DED   V+           V E L  +  YT+           +C +LSFD         +P +C+C E++ A  +C   T  DC  P+ D +     C  + D            VC E     D  TA GDPHMTGF GQKFDFTG DG WY +I+D  +M++NMRVT+PV+  P+ITYITG
Sbjct:  388 DNARCIED-SMVAVSEFRDDGDFVC-------SDDGDTCTVDSDCCVGFCGSAGICATEQCGGAGGDTATI--EDMVCDPENNVDECQYDGGDC--------CECDCSNQVCDEDNTCVTPAW-----DCVVDEALPDNGAYTVP--------SGDCPSLSFDDFDNCDYTTQPCLCTCRESDPATALCGSGTGFDCLDPASDCVKEPTGCVDDGDCTLPEECTLVKLVC-EVPILTDP-TAGGDPHMTGFHGQKFDFTGNDGQWYCLISDLPSMHLNMRVTAPVSSRPDITYITG 650          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: A0A6H5L5Y7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y7_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.520e-15
Identity = 39/45 (86.67%), Postives = 41/45 (91.11%), Query Frame = 0
Query:  321 GDPHMTGFLGQKFDFTGEDGGWYSVIADSNMNVNMRVTSPVAELP 365
            G PHMTGFLGQKFDFTGEDGGWYS+IADSNMNVNMRVTSP +  P
Sbjct:    9 GGPHMTGFLGQKFDFTGEDGGWYSIIADSNMNVNMRVTSPSSTCP 53          
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Match: D7G9C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9C8_ECTSI)

HSP 1 Score: 77.4 bits (189), Expect = 5.620e-14
Identity = 43/75 (57.33%), Postives = 49/75 (65.33%), Query Frame = 0
Query:  295 SGDLICCKE--RDVCDEFSTGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIAD-SNMNVNMRVTSPVAELPE 366
            SG L CC E    VC     GA    ACGDPHMTGFLGQKFDFTGEDGG+Y+VI+D  N+++NM   S    L E
Sbjct:    9 SGKLKCCTEVFPHVCRNPDPGAPAARACGDPHMTGFLGQKFDFTGEDGGYYAVISDFPNLHMNMVSDSATGILGE 83          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig606.16706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5KVF3_9PHAE2.040e-7943.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LHI6_ECTSI3.020e-2430.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K7V7_9PHAE4.450e-2350.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JW46_9PHAE2.530e-2160.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGH7_ECTSI1.040e-2030.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRS2_9PHAE2.380e-1861.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF50_9PHAE4.220e-1643.70LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JRC1_9PHAE2.950e-1532.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L5Y7_9PHAE3.520e-1586.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G9C8_ECTSI5.620e-1457.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig606contigEcto-sp13_S_contig606:1587..8112 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig606.16706.1mRNA_Ecto-sp13_S_contig606.16706.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig606 1584..8127 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig606.16706.1 ID=prot_Ecto-sp13_S_contig606.16706.1|Name=mRNA_Ecto-sp13_S_contig606.16706.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=416bp
MGNACSNTDTFSGQVECLNAGSCTAETLLPVAAPLVVGDELCDGTRDSIT
LTGDLVLASSGRAFDVGMWIGPIGDDPLCTRYGFKCEDQDAVGFDIDGDG
CADFEEVNDGGDNVRAFRGVSWTAPCKGNDVGDFLLDLCLTWKTADGNTD
CTDIDGIVSLPGVECICGEASFDVIKVCPTDLTVTTSTSTSLCLGDGVDV
TIDIPDIPTDADIEYVIKDEDGNEVSSGQLAGTTTLAVPEPLVPDVDYTI
DVTLSFASVGLECATLSFDLEPICSCGENNANCVCNPATDVDCPSGDLIC
CKERDVCDEFSTGADGGTACGDPHMTGFLGQKFDFTGEDGGWYSVIADSN
MNVNMRVTSPVAELPEITYITGSRTLIPHTAMPVESRYRGPVAFRPVRPH
HRRRRVRSQHRHRSR*
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