prot_Ecto-sp13_S_contig6058.16702.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6058.16702.1
Unique Nameprot_Ecto-sp13_S_contig6058.16702.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length337
Homology
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE)

HSP 1 Score: 623 bits (1607), Expect = 3.860e-214
Identity = 328/336 (97.62%), Postives = 332/336 (98.81%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKATMER 336
            CKLSSVAKDTLLTDINLDTVDM  NFDGNE EPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRS+RNAVVVTELPYQVNKSSLLQ+MAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMID+VIELVRASTDT MARDGLMAEPYGLSQEQA+AILALRLGRLTSMEEGKLKAEAEDLKATMER
Sbjct:  282 CKLSSVAKDTLLTDINLDTVDMTTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSRRNAVVVTELPYQVNKSSLLQKMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDAVIELVRASTDTPMARDGLMAEPYGLSQEQADAILALRLGRLTSMEEGKLKAEAEDLKATMER 617          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA)

HSP 1 Score: 451 bits (1161), Expect = 4.600e-150
Identity = 229/335 (68.36%), Postives = 282/335 (84.18%), Query Frame = 0
Query:    2 KLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKATMER 336
            KL+ VA+D LL D+ +DTVD + NFDGNE EPVVLP+RLP+LL+NGATGIAVGMATNIPPHNLGE+  A +ALI++PELP+  LF+++PAPDFP+GG IMGLAGARK+YTTSNG VTLRATTHIE I  + R  RNAV+VTE+PY VNK++LL+++A +VN+KKL+GI+DLRDESDRDG+RVV+ELKRDA PQVV+NNL+KKTQLQTSFSGNMLA+G+DG +P RF+LRA + SF+ FRF TVRRRTA+EL KV+AR+HIV+GML AL  ++ VIELVR S D + AR  L  + +GLS EQA+A+LALRLGRLT  EE KLK E  DL   ++R
Sbjct:  105 KLAPVARDALLADVAMDTVDFVPNFDGNEQEPVVLPARLPILLLNGATGIAVGMATNIPPHNLGELTDACVALIKDPELPEADLFKIVPAPDFPSGGTIMGLAGARKMYTTSNGSVTLRATTHIESIAQRTRPPRNAVIVTEMPYMVNKAALLEKIAALVNEKKLDGIADLRDESDRDGIRVVIELKRDAVPQVVQNNLYKKTQLQTSFSGNMLAIGADGLQPQRFTLRALLDSFLAFRFKTVRRRTAYELAKVQARDHIVEGMLIALARVEEVIELVRGSKDNATARQHLTNKDFGLSTEQADAVLALRLGRLTKAEEIKLKKEHTDLTKEIKR 439          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S3UWW0_HETAK (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWW0_HETAK)

HSP 1 Score: 430 bits (1105), Expect = 2.380e-144
Identity = 214/330 (64.85%), Postives = 271/330 (82.12%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDL 330
            C+LS VA+D L+TD+  DTV M+ NFDGNE EP VLP+RLP+LL+NGA GIAVGMATNIPPHNLGE+V   +AL+ + +LPD +L+RL+PAPDFPTGG ++G  GAR+ Y T NGG+ +RA T++E+I   GR  RNA++VTELPYQV+K+ LL ++AEMVNDKKL+GISDLRDES+RDG+RVV+ELKRDANP VV NNLFKKTQLQ SF+GN LALG+ G +PHR+SLR A+  F+DFRF TVR+R AF+LGKV+AR+H+++G+L ALG ID +I+L+R S DT+ AR  LM + YGL++ QA AIL L L RLT MEE KLK+E +DL
Sbjct:  201 CRLSGVARDALMTDLGQDTVPMVPNFDGNEQEPAVLPARLPMLLLNGAAGIAVGMATNIPPHNLGELVDGCVALLGDRDLPDAELYRLIPAPDFPTGGHLLGTEGARRFYETGNGGIQIRAVTNMEMI-TNGRMSRNAIIVTELPYQVSKAGLLAKIAEMVNDKKLDGISDLRDESNRDGIRVVLELKRDANPSVVRNNLFKKTQLQASFAGNHLALGAAGKQPHRYSLRQALLEFLDFRFETVRKRAAFDLGKVQARQHLLEGLLLALGRIDDIIDLMRKSKDTASARKKLMGKEYGLTEVQANAILGLTLSRLTGMEEKKLKSEQKDL 529          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA)

HSP 1 Score: 433 bits (1114), Expect = 3.440e-141
Identity = 217/336 (64.58%), Postives = 274/336 (81.55%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIE-AKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKATME 335
            CKLS +A+D LL DINLDTVD   NFDGNE EP+VLP+R+P+LL+NGATGIAVGMATN+PPHNLGEV+  T+ALI +P L DD+L RL+PAPDFPTGG IMGL G RKLYT  +G + +RA TH+E I    GR  RNA+VVTELPYQVNK+SLL+++A+MVN+KK+EGISDLRDESDR+G+RVV+ELKRDA P VVENNLFKKT LQ+SF GN LAL +DG +P R +LR ++QSF+DFRF T+RRRT  EL K+ +R+H+V+G+++AL  ID V+ELVR + DT+ A+  LM   Y +S+ QA+AILAL LGRLT++E+ KL+AE E L+  +E
Sbjct:  249 CKLSLLARDALLKDINLDTVDFAPNFDGNEVEPLVLPARVPMLLLNGATGIAVGMATNVPPHNLGEVLDGTLALIEDPSLSDDKLLRLIPAPDFPTGGDIMGLEGPRKLYTNGSGSIVMRAKTHMETIPMGGGRQVRNAIVVTELPYQVNKASLLEKIADMVNEKKMEGISDLRDESDREGIRVVIELKRDAMPSVVENNLFKKTALQSSFPGNFLALANDGRQPQRLTLRESLQSFIDFRFKTIRRRTQHELSKLESRDHVVEGLIRALDRIDDVVELVRRAKDTAAAKATLMGSQYDMSEAQAQAILALTLGRLTALEDAKLRAEREQLRGQIE 584          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC)

HSP 1 Score: 420 bits (1079), Expect = 2.250e-136
Identity = 211/337 (62.61%), Postives = 268/337 (79.53%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRS-----KRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKA 332
            CKL+ +++D LL D+++DTVD +ANFDGNE EP +LP++LP LL+NGATGIAVGMATNIPPH LGE+V A IALI+NP L D++LF L+PAPDFPTG  I+GL G RKLY T NG V +RA TH+E I+   R       R A+VVTELPY VNKS LL+RMA MVN+KKLEGI+DLRDESDRDG R+V+ELK+DA   VV+NNLFKKTQLQTSF+GN+L+LG DG +P R +LR+A+Q ++DFRF T+RRRT FELG+ + R H+V+G+L+AL  ID VI++VR + D + AR+ L   P+ LS+EQAEA+L L L RLT++EE KLK E E+L+A
Sbjct:  142 CKLTPLSRDALLADVSMDTVDFVANFDGNEVEPTILPAKLPFLLLNGATGIAVGMATNIPPHQLGELVDACIALIKNPSLSDERLFSLIPAPDFPTGALIVGLEGVRKLYKTGNGAVVMRARTHVEEIKKTNRKGGQLGSRTAIVVTELPYMVNKSVLLERMATMVNEKKLEGIADLRDESDRDGTRIVIELKKDARATVVQNNLFKKTQLQTSFAGNLLSLGDDGKQPVRLTLRSALQIWLDFRFRTIRRRTNFELGRRKQRAHVVEGLLKALAQIDDVIDVVRQAKDANQAREALQGSPFDLSEEQAEALLRLTLARLTALEEEKLKTELEELRA 478          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S4MTJ4_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTJ4_9STRA)

HSP 1 Score: 390 bits (1002), Expect = 6.560e-125
Identity = 201/339 (59.29%), Postives = 262/339 (77.29%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIR-----NPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEP----YGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDL 330
            C+L+ V+ + LL D+  D VD + NFDGNE EP VLP+RLP+LL+NG  GIAVGMATN+PPHNLGE++ A +AL         EL D  L+RL+P PDFPTG RIMG +G++KLY+T NGGV +RA TH+E I +KG   R+A+VVTELPYQVNK++LL+R+A+MVN+KK+EG++DLRDESDRDG+RVV+ELKRDA   VV+NNLFKKT LQTSFSGN LAL   GT P RF+LR+A+ +F+DFRF T+RRR+A++L KV AR HIV+G+L+AL   D VIE VR++ D + ARD LM +      GLS++QA+A+L L+LG+LT + + KL  E + L
Sbjct:  237 CRLTPVSNEALLGDLGRDAVDFIPNFDGNEAEPTVLPARLPVLLLNGCAGIAVGMATNVPPHNLGELMDACVALTHAAEDGQDELSDGALYRLVPGPDFPTGARIMGTSGSKKLYSTGNGGVVVRAVTHVEQIVSKGGKPRSAIVVTELPYQVNKAALLERIADMVNEKKIEGVADLRDESDRDGIRVVIELKRDAVAAVVQNNLFKKTSLQTSFSGNFLALMGSGTIPQRFTLRSALDTFLDFRFKTIRRRSAYQLKKVDARIHIVEGLLKALARADDVIETVRSAPDQASARDALMDDTGDDGLGLSRDQADAVLKLQLGQLTRLNKSKLLDEKDTL 575          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S4VAS9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAS9_9STRA)

HSP 1 Score: 380 bits (975), Expect = 5.520e-121
Identity = 198/340 (58.24%), Postives = 259/340 (76.18%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALI----RNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMA---EPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKAT 333
            C+L+ VA + LL DI  DTVD ++NFDGNE EP VLP++LPLLL+NG +GIAVGMATN+PPHNL E++ A IA+I       E+ D +L R++P PDFPTG  IMG++  ++LYTT NGG+ +RA TH+E      +S + A+VVTELPYQVNK+ LL+++A +VNDKKLEGISDLRDESDRDG+RVV+ELKRDA P VV+NNLFKKT LQT+FSGN LAL   GT P RF+LR+A+  F+DFR  T+RRR+AF+L +V+ R HIV G+L AL +ID VIE++R++ D   AR  LM    E   LS+EQA+A+L L+LG+LT + +GKL  E + L+A+
Sbjct:  243 CRLTKVATNALLDDITSDTVDFISNFDGNEMEPTVLPAKLPLLLLNGCSGIAVGMATNVPPHNLNELMDACIAMIDARDEGEEVSDQELVRIVPGPDFPTGASIMGMSNIKQLYTTGNGGIVVRAVTHVETGGDGRKSGKTAIVVTELPYQVNKAGLLEKIATLVNDKKLEGISDLRDESDRDGIRVVIELKRDAVPAVVQNNLFKKTPLQTTFSGNFLALMGSGTVPRRFTLRSALDCFLDFRIETIRRRSAFQLRRVKNRAHIVDGLLLALNVIDEVIEIIRSAPDQMTARVELMDPGNERLSLSREQADAVLRLQLGQLTRLNKGKLTDERKTLEAS 582          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: K0SED5_THAOC (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SED5_THAOC)

HSP 1 Score: 371 bits (952), Expect = 8.420e-118
Identity = 196/338 (57.99%), Postives = 254/338 (75.15%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRN-----PELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYG---LSQEQAEAILALRLGRLTSMEEGKLKAEAEDL 330
            C+L+ +A +TLL DINLDTVD + NFDG+E EP VLP+++P+LL+NG  GIAVGMATNIPPHNL E++ A +AL +       E+ ++QL R++P PDFPT G I+G +GARKLYTT NGG+ +R+  H+E +  K ++KRNA++VTELPYQVNK +LL+R+A +VN+KKL+GI+DLRDESDR+G+RVV+ELKRDA   VV+NNL KKT LQTSFSGN LAL   GT P RF+LR A+  F+DFRF T+R +TAF+L KV  R HIV+G+L AL   D VIE+VR + D + ARD LM E  G   LS  QA+A+L L+LG+LT +   KL  E   L
Sbjct:  250 CRLTKLAAETLLDDINLDTVDFLPNFDGSEYEPAVLPAKVPVLLLNGGAGIAVGMATNIPPHNLCELMDACVALTQGRNDGGKEVTENQLLRIVPGPDFPTEGTIIGKSGARKLYTTGNGGIVMRSVMHLEQVSGK-KTKRNAIIVTELPYQVNKGALLERIASLVNEKKLDGIADLRDESDRNGIRVVIELKRDAIATVVQNNLLKKTSLQTSFSGNFLALFGSGTVPQRFTLREALDCFLDFRFQTIRNKTAFQLDKVDNRAHIVEGLLLALEYTDEVIEIVRGAPDQATARDILMDEENGKFCLSSAQADAVLRLQLGQLTRLNGKKLSDERATL 586          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A3B8XW30_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8XW30_9CYAN)

HSP 1 Score: 360 bits (925), Expect = 1.460e-117
Identity = 178/332 (53.61%), Postives = 260/332 (78.31%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKA 332
            C+L S++ + +L DI  +TVD + NFDG++ EPVVLP+R+P LL+NG++GIAVGMATNIPPHNLGE++  TIALI+NPE+ + +L +L+P PDFPTGG+I+G +G R  YTT  G +T+R    IE +E +GR  R ++VVT+LPYQ NK++L++R+A++VNDK++EGISD+RDESDRDG+R+V+ELKRDA P+VV NNL+K+T +Q++F  NMLAL +   +P   +L+  +  F++FR  T+ RRT +EL K + R+H++QG+L AL  +D+VI+L+R + DT+ A+DGL+ E +GLS  QA+AIL ++L RLT++E  K+ AE E+L+A
Sbjct:  125 CRLQSLSTNAMLRDIEAETVDFIDNFDGSQQEPVVLPARVPQLLLNGSSGIAVGMATNIPPHNLGELIDGTIALIQNPEMEEIELRKLIPGPDFPTGGQILGRSGIRDAYTTGRGSITMRGVASIETLEQRGRPDRESIVVTQLPYQTNKAALIERIADLVNDKRIEGISDIRDESDRDGMRIVIELKRDAYPRVVLNNLYKQTPIQSNFGANMLALVNG--EPQLLTLKEFLTVFLEFRVETITRRTRYELRKAQERDHLLQGLLIALDNLDAVIQLIRQAADTATAKDGLVEE-FGLSAVQADAILQMQLRRLTALEAEKIHAEHEELQA 453          
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S2R192_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R192_9STRA)

HSP 1 Score: 355 bits (910), Expect = 6.620e-117
Identity = 181/297 (60.94%), Postives = 233/297 (78.45%), Query Frame = 0
Query:    1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRN-----PELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGL 292
            C+L+ V+ +TLL D+NLDTVD +ANFDGNE EP VLP++LP+LL+NG  GIAVGMATN+PPHNL E++ A I L ++       L D +L  ++P PDFPTG +I+G  GA+KLYTT NGGV +RA TH E I      +R+A++VT+LPYQVNKS+LL++ A++VNDKKLEGI+DLRDESDRDG+RVV ELKRDA P VV NNL+KKTQLQTSFSGN LAL  +GT P RF+LR+A+  F+DFRFTT+RRR+A++L KV +R HIV G+L AL  +D VI ++R++ D S AR+ L
Sbjct:  166 CRLTKVSSETLLDDLNLDTVDFIANFDGNEVEPTVLPAKLPILLLNGCAGIAVGMATNVPPHNLEELMKACILLTKSRLTDGKPLSDKRLLSIVPGPDFPTGAKIIGTEGAKKLYTTGNGGVVVRAVTHFETI-----GRRSAIIVTQLPYQVNKSALLEKTADLVNDKKLEGIADLRDESDRDGIRVVFELKRDAVPAVVLNNLYKKTQLQTSFSGNFLALMGEGTIPKRFTLRSALDCFLDFRFTTIRRRSAYQLQKVASRAHIVDGLLLALISVDEVIAMIRSAKDQSSAREAL 457          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKP9_9PHAE3.860e-21497.62DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectoca... [more]
A0A836CKD9_9STRA4.600e-15068.36DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribon... [more]
A0A7S3UWW0_HETAK2.380e-14464.85DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
W7TLA9_9STRA3.440e-14164.58DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodo... [more]
A0A0G4ESH9_VITBC2.250e-13662.61DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrel... [more]
A0A7S4MTJ4_9STRA6.560e-12559.29DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odonte... [more]
A0A7S4VAS9_9STRA5.520e-12158.24DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylu... [more]
K0SED5_THAOC8.420e-11857.99DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Thalas... [more]
A0A3B8XW30_9CYAN1.460e-11753.61DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A7S2R192_9STRA6.620e-11760.94Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminalSMARTSM00434topIV4coord: 1..336
e-value: 2.8E-86
score: 302.6
IPR002205DNA topoisomerase, type IIA, subunit A/C-terminalPFAMPF00521DNA_topoisoIVcoord: 1..335
e-value: 1.1E-89
score: 301.3
IPR013757Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamilyGENE3D1.10.268.10coord: 228..336
e-value: 1.1E-29
score: 105.3
NoneNo IPR availableGENE3D3.30.1360.40coord: 38..224
e-value: 4.4E-69
score: 233.4
NoneNo IPR availablePANTHERPTHR43493FAMILY NOT NAMEDcoord: 1..334
IPR013758DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-betaGENE3D3.90.199.10coord: 1..37
e-value: 5.1E-5
score: 25.7
IPR013760DNA topoisomerase, type IIA-like domain superfamilySUPERFAMILY56719Type II DNA topoisomerasecoord: 2..334

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6058contigEcto-sp13_S_contig6058:63..8090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6058.16702.1mRNA_Ecto-sp13_S_contig6058.16702.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6058 63..8090 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6058.16702.1 ID=prot_Ecto-sp13_S_contig6058.16702.1|Name=mRNA_Ecto-sp13_S_contig6058.16702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=337bp
CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATG
IAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRI
MGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNK
SSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNL
FKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAF
ELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLS
QEQAEAILALRLGRLTSMEEGKLKAEAEDLKATMER*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002205Topo_IIA_A/C
IPR013757Topo_IIA_A_a_sf
IPR013758Topo_IIA_A/C_ab
IPR013760Topo_IIA-like_dom_sf