mRNA_Ecto-sp13_S_contig6058.16702.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE) HSP 1 Score: 623 bits (1607), Expect = 3.860e-214 Identity = 328/336 (97.62%), Postives = 332/336 (98.81%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKATMER 1008
CKLSSVAKDTLLTDINLDTVDM NFDGNE EPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRS+RNAVVVTELPYQVNKSSLLQ+MAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMID+VIELVRASTDT MARDGLMAEPYGLSQEQA+AILALRLGRLTSMEEGKLKAEAEDLKATMER
Sbjct: 282 CKLSSVAKDTLLTDINLDTVDMTTNFDGNEKEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSRRNAVVVTELPYQVNKSSLLQKMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDAVIELVRASTDTPMARDGLMAEPYGLSQEQADAILALRLGRLTSMEEGKLKAEAEDLKATMER 617
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA) HSP 1 Score: 451 bits (1161), Expect = 4.600e-150 Identity = 229/335 (68.36%), Postives = 282/335 (84.18%), Query Frame = 1
Query: 4 KLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKATMER 1008
KL+ VA+D LL D+ +DTVD + NFDGNE EPVVLP+RLP+LL+NGATGIAVGMATNIPPHNLGE+ A +ALI++PELP+ LF+++PAPDFP+GG IMGLAGARK+YTTSNG VTLRATTHIE I + R RNAV+VTE+PY VNK++LL+++A +VN+KKL+GI+DLRDESDRDG+RVV+ELKRDA PQVV+NNL+KKTQLQTSFSGNMLA+G+DG +P RF+LRA + SF+ FRF TVRRRTA+EL KV+AR+HIV+GML AL ++ VIELVR S D + AR L + +GLS EQA+A+LALRLGRLT EE KLK E DL ++R
Sbjct: 105 KLAPVARDALLADVAMDTVDFVPNFDGNEQEPVVLPARLPILLLNGATGIAVGMATNIPPHNLGELTDACVALIKDPELPEADLFKIVPAPDFPSGGTIMGLAGARKMYTTSNGSVTLRATTHIESIAQRTRPPRNAVIVTEMPYMVNKAALLEKIAALVNEKKLDGIADLRDESDRDGIRVVIELKRDAVPQVVQNNLYKKTQLQTSFSGNMLAIGADGLQPQRFTLRALLDSFLAFRFKTVRRRTAYELAKVQARDHIVEGMLIALARVEEVIELVRGSKDNATARQHLTNKDFGLSTEQADAVLALRLGRLTKAEEIKLKKEHTDLTKEIKR 439
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S3UWW0_HETAK (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWW0_HETAK) HSP 1 Score: 430 bits (1105), Expect = 2.380e-144 Identity = 214/330 (64.85%), Postives = 271/330 (82.12%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDL 990
C+LS VA+D L+TD+ DTV M+ NFDGNE EP VLP+RLP+LL+NGA GIAVGMATNIPPHNLGE+V +AL+ + +LPD +L+RL+PAPDFPTGG ++G GAR+ Y T NGG+ +RA T++E+I GR RNA++VTELPYQV+K+ LL ++AEMVNDKKL+GISDLRDES+RDG+RVV+ELKRDANP VV NNLFKKTQLQ SF+GN LALG+ G +PHR+SLR A+ F+DFRF TVR+R AF+LGKV+AR+H+++G+L ALG ID +I+L+R S DT+ AR LM + YGL++ QA AIL L L RLT MEE KLK+E +DL
Sbjct: 201 CRLSGVARDALMTDLGQDTVPMVPNFDGNEQEPAVLPARLPMLLLNGAAGIAVGMATNIPPHNLGELVDGCVALLGDRDLPDAELYRLIPAPDFPTGGHLLGTEGARRFYETGNGGIQIRAVTNMEMI-TNGRMSRNAIIVTELPYQVSKAGLLAKIAEMVNDKKLDGISDLRDESNRDGIRVVLELKRDANPSVVRNNLFKKTQLQASFAGNHLALGAAGKQPHRYSLRQALLEFLDFRFETVRKRAAFDLGKVQARQHLLEGLLLALGRIDDIIDLMRKSKDTASARKKLMGKEYGLTEVQANAILGLTLSRLTGMEEKKLKSEQKDL 529
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA) HSP 1 Score: 433 bits (1114), Expect = 3.440e-141 Identity = 217/336 (64.58%), Postives = 274/336 (81.55%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIE-AKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKATME 1005
CKLS +A+D LL DINLDTVD NFDGNE EP+VLP+R+P+LL+NGATGIAVGMATN+PPHNLGEV+ T+ALI +P L DD+L RL+PAPDFPTGG IMGL G RKLYT +G + +RA TH+E I GR RNA+VVTELPYQVNK+SLL+++A+MVN+KK+EGISDLRDESDR+G+RVV+ELKRDA P VVENNLFKKT LQ+SF GN LAL +DG +P R +LR ++QSF+DFRF T+RRRT EL K+ +R+H+V+G+++AL ID V+ELVR + DT+ A+ LM Y +S+ QA+AILAL LGRLT++E+ KL+AE E L+ +E
Sbjct: 249 CKLSLLARDALLKDINLDTVDFAPNFDGNEVEPLVLPARVPMLLLNGATGIAVGMATNVPPHNLGEVLDGTLALIEDPSLSDDKLLRLIPAPDFPTGGDIMGLEGPRKLYTNGSGSIVMRAKTHMETIPMGGGRQVRNAIVVTELPYQVNKASLLEKIADMVNEKKMEGISDLRDESDREGIRVVIELKRDAMPSVVENNLFKKTALQSSFPGNFLALANDGRQPQRLTLRESLQSFIDFRFKTIRRRTQHELSKLESRDHVVEGLIRALDRIDDVVELVRRAKDTAAAKATLMGSQYDMSEAQAQAILALTLGRLTALEDAKLRAEREQLRGQIE 584
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC) HSP 1 Score: 420 bits (1079), Expect = 2.250e-136 Identity = 211/337 (62.61%), Postives = 268/337 (79.53%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRS-----KRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKA 996
CKL+ +++D LL D+++DTVD +ANFDGNE EP +LP++LP LL+NGATGIAVGMATNIPPH LGE+V A IALI+NP L D++LF L+PAPDFPTG I+GL G RKLY T NG V +RA TH+E I+ R R A+VVTELPY VNKS LL+RMA MVN+KKLEGI+DLRDESDRDG R+V+ELK+DA VV+NNLFKKTQLQTSF+GN+L+LG DG +P R +LR+A+Q ++DFRF T+RRRT FELG+ + R H+V+G+L+AL ID VI++VR + D + AR+ L P+ LS+EQAEA+L L L RLT++EE KLK E E+L+A
Sbjct: 142 CKLTPLSRDALLADVSMDTVDFVANFDGNEVEPTILPAKLPFLLLNGATGIAVGMATNIPPHQLGELVDACIALIKNPSLSDERLFSLIPAPDFPTGALIVGLEGVRKLYKTGNGAVVMRARTHVEEIKKTNRKGGQLGSRTAIVVTELPYMVNKSVLLERMATMVNEKKLEGIADLRDESDRDGTRIVIELKKDARATVVQNNLFKKTQLQTSFAGNLLSLGDDGKQPVRLTLRSALQIWLDFRFRTIRRRTNFELGRRKQRAHVVEGLLKALAQIDDVIDVVRQAKDANQAREALQGSPFDLSEEQAEALLRLTLARLTALEEEKLKTELEELRA 478
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S4MTJ4_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MTJ4_9STRA) HSP 1 Score: 390 bits (1002), Expect = 6.560e-125 Identity = 201/339 (59.29%), Postives = 262/339 (77.29%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIR-----NPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEP----YGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDL 990
C+L+ V+ + LL D+ D VD + NFDGNE EP VLP+RLP+LL+NG GIAVGMATN+PPHNLGE++ A +AL EL D L+RL+P PDFPTG RIMG +G++KLY+T NGGV +RA TH+E I +KG R+A+VVTELPYQVNK++LL+R+A+MVN+KK+EG++DLRDESDRDG+RVV+ELKRDA VV+NNLFKKT LQTSFSGN LAL GT P RF+LR+A+ +F+DFRF T+RRR+A++L KV AR HIV+G+L+AL D VIE VR++ D + ARD LM + GLS++QA+A+L L+LG+LT + + KL E + L
Sbjct: 237 CRLTPVSNEALLGDLGRDAVDFIPNFDGNEAEPTVLPARLPVLLLNGCAGIAVGMATNVPPHNLGELMDACVALTHAAEDGQDELSDGALYRLVPGPDFPTGARIMGTSGSKKLYSTGNGGVVVRAVTHVEQIVSKGGKPRSAIVVTELPYQVNKAALLERIADMVNEKKIEGVADLRDESDRDGIRVVIELKRDAVAAVVQNNLFKKTSLQTSFSGNFLALMGSGTIPQRFTLRSALDTFLDFRFKTIRRRSAYQLKKVDARIHIVEGLLKALARADDVIETVRSAPDQASARDALMDDTGDDGLGLSRDQADAVLKLQLGQLTRLNKSKLLDEKDTL 575
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S4VAS9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VAS9_9STRA) HSP 1 Score: 380 bits (975), Expect = 5.520e-121 Identity = 198/340 (58.24%), Postives = 259/340 (76.18%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALI----RNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMA---EPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKAT 999
C+L+ VA + LL DI DTVD ++NFDGNE EP VLP++LPLLL+NG +GIAVGMATN+PPHNL E++ A IA+I E+ D +L R++P PDFPTG IMG++ ++LYTT NGG+ +RA TH+E +S + A+VVTELPYQVNK+ LL+++A +VNDKKLEGISDLRDESDRDG+RVV+ELKRDA P VV+NNLFKKT LQT+FSGN LAL GT P RF+LR+A+ F+DFR T+RRR+AF+L +V+ R HIV G+L AL +ID VIE++R++ D AR LM E LS+EQA+A+L L+LG+LT + +GKL E + L+A+
Sbjct: 243 CRLTKVATNALLDDITSDTVDFISNFDGNEMEPTVLPAKLPLLLLNGCSGIAVGMATNVPPHNLNELMDACIAMIDARDEGEEVSDQELVRIVPGPDFPTGASIMGMSNIKQLYTTGNGGIVVRAVTHVETGGDGRKSGKTAIVVTELPYQVNKAGLLEKIATLVNDKKLEGISDLRDESDRDGIRVVIELKRDAVPAVVQNNLFKKTPLQTTFSGNFLALMGSGTVPRRFTLRSALDCFLDFRIETIRRRSAFQLRRVKNRAHIVDGLLLALNVIDEVIEIIRSAPDQMTARVELMDPGNERLSLSREQADAVLRLQLGQLTRLNKGKLTDERKTLEAS 582
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: K0SED5_THAOC (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SED5_THAOC) HSP 1 Score: 371 bits (952), Expect = 8.420e-118 Identity = 196/338 (57.99%), Postives = 254/338 (75.15%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRN-----PELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYG---LSQEQAEAILALRLGRLTSMEEGKLKAEAEDL 990
C+L+ +A +TLL DINLDTVD + NFDG+E EP VLP+++P+LL+NG GIAVGMATNIPPHNL E++ A +AL + E+ ++QL R++P PDFPT G I+G +GARKLYTT NGG+ +R+ H+E + K ++KRNA++VTELPYQVNK +LL+R+A +VN+KKL+GI+DLRDESDR+G+RVV+ELKRDA VV+NNL KKT LQTSFSGN LAL GT P RF+LR A+ F+DFRF T+R +TAF+L KV R HIV+G+L AL D VIE+VR + D + ARD LM E G LS QA+A+L L+LG+LT + KL E L
Sbjct: 250 CRLTKLAAETLLDDINLDTVDFLPNFDGSEYEPAVLPAKVPVLLLNGGAGIAVGMATNIPPHNLCELMDACVALTQGRNDGGKEVTENQLLRIVPGPDFPTEGTIIGKSGARKLYTTGNGGIVMRSVMHLEQVSGK-KTKRNAIIVTELPYQVNKGALLERIASLVNEKKLDGIADLRDESDRNGIRVVIELKRDAIATVVQNNLLKKTSLQTSFSGNFLALFGSGTVPQRFTLREALDCFLDFRFQTIRNKTAFQLDKVDNRAHIVEGLLLALEYTDEVIEIVRGAPDQATARDILMDEENGKFCLSSAQADAVLRLQLGQLTRLNGKKLSDERATL 586
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A3B8XW30_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Cyanothece sp. UBA12306 TaxID=2055757 RepID=A0A3B8XW30_9CYAN) HSP 1 Score: 360 bits (925), Expect = 1.460e-117 Identity = 178/332 (53.61%), Postives = 260/332 (78.31%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRNPELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGLMAEPYGLSQEQAEAILALRLGRLTSMEEGKLKAEAEDLKA 996
C+L S++ + +L DI +TVD + NFDG++ EPVVLP+R+P LL+NG++GIAVGMATNIPPHNLGE++ TIALI+NPE+ + +L +L+P PDFPTGG+I+G +G R YTT G +T+R IE +E +GR R ++VVT+LPYQ NK++L++R+A++VNDK++EGISD+RDESDRDG+R+V+ELKRDA P+VV NNL+K+T +Q++F NMLAL + +P +L+ + F++FR T+ RRT +EL K + R+H++QG+L AL +D+VI+L+R + DT+ A+DGL+ E +GLS QA+AIL ++L RLT++E K+ AE E+L+A
Sbjct: 125 CRLQSLSTNAMLRDIEAETVDFIDNFDGSQQEPVVLPARVPQLLLNGSSGIAVGMATNIPPHNLGELIDGTIALIQNPEMEEIELRKLIPGPDFPTGGQILGRSGIRDAYTTGRGSITMRGVASIETLEQRGRPDRESIVVTQLPYQTNKAALIERIADLVNDKRIEGISDIRDESDRDGMRIVIELKRDAYPRVVLNNLYKQTPIQSNFGANMLALVNG--EPQLLTLKEFLTVFLEFRVETITRRTRYELRKAQERDHLLQGLLIALDNLDAVIQLIRQAADTATAKDGLVEE-FGLSAVQADAILQMQLRRLTALEAEKIHAEHEELQA 453
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Match: A0A7S2R192_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R192_9STRA) HSP 1 Score: 355 bits (910), Expect = 6.620e-117 Identity = 181/297 (60.94%), Postives = 233/297 (78.45%), Query Frame = 1
Query: 1 CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGIAVGMATNIPPHNLGEVVAATIALIRN-----PELPDDQLFRLLPAPDFPTGGRIMGLAGARKLYTTSNGGVTLRATTHIEVIEAKGRSKRNAVVVTELPYQVNKSSLLQRMAEMVNDKKLEGISDLRDESDRDGVRVVVELKRDANPQVVENNLFKKTQLQTSFSGNMLALGSDGTKPHRFSLRAAIQSFVDFRFTTVRRRTAFELGKVRAREHIVQGMLQALGMIDSVIELVRASTDTSMARDGL 876
C+L+ V+ +TLL D+NLDTVD +ANFDGNE EP VLP++LP+LL+NG GIAVGMATN+PPHNL E++ A I L ++ L D +L ++P PDFPTG +I+G GA+KLYTT NGGV +RA TH E I +R+A++VT+LPYQVNKS+LL++ A++VNDKKLEGI+DLRDESDRDG+RVV ELKRDA P VV NNL+KKTQLQTSFSGN LAL +GT P RF+LR+A+ F+DFRFTT+RRR+A++L KV +R HIV G+L AL +D VI ++R++ D S AR+ L
Sbjct: 166 CRLTKVSSETLLDDLNLDTVDFIANFDGNEVEPTVLPAKLPILLLNGCAGIAVGMATNVPPHNLEELMKACILLTKSRLTDGKPLSDKRLLSIVPGPDFPTGAKIIGTEGAKKLYTTGNGGVVVRAVTHFETI-----GRRSAIIVTQLPYQVNKSALLEKTADLVNDKKLEGIADLRDESDRDGIRVVFELKRDAVPAVVLNNLYKKTQLQTSFSGNFLALMGEGTIPKRFTLRSALDCFLDFRFTTIRRRSAYQLQKVASRAHIVDGLLLALISVDEVIAMIRSAKDQSSAREAL 457 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6058.16702.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6058.16702.1 >prot_Ecto-sp13_S_contig6058.16702.1 ID=prot_Ecto-sp13_S_contig6058.16702.1|Name=mRNA_Ecto-sp13_S_contig6058.16702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=337bp CKLSSVAKDTLLTDINLDTVDMMANFDGNENEPVVLPSRLPLLLINGATGback to top mRNA from alignment at Ecto-sp13_S_contig6058:63..8090- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6058.16702.1 ID=mRNA_Ecto-sp13_S_contig6058.16702.1|Name=mRNA_Ecto-sp13_S_contig6058.16702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=8028bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6058:63..8090- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6058:63..8090- >mRNA_Ecto-sp13_S_contig6058.16702.1 ID=mRNA_Ecto-sp13_S_contig6058.16702.1|Name=mRNA_Ecto-sp13_S_contig6058.16702.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1011bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6058:63..8090- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |