mRNA_Ecto-sp13_S_contig60519.16692.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A6H5L2R2_9PHAE (LNS2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R2_9PHAE) HSP 1 Score: 141 bits (355), Expect = 1.450e-37 Identity = 68/68 (100.00%), Postives = 68/68 (100.00%), Query Frame = 1
Query: 13 RYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDE 216
RYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDE
Sbjct: 152 RYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDE 219
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: D8LKT7_ECTSI (LNS2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT7_ECTSI) HSP 1 Score: 139 bits (349), Expect = 2.620e-37 Identity = 67/68 (98.53%), Postives = 67/68 (98.53%), Query Frame = 1
Query: 13 RYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDE 216
RYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNH HEGICSLLARMVDE
Sbjct: 20 RYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHTHEGICSLLARMVDE 87
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A836C9R7_9STRA (LNS2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9R7_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.630e-17 Identity = 42/68 (61.76%), Postives = 52/68 (76.47%), Query Frame = 1
Query: 13 RYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDE 216
R+ DPRVLVAECFAF +D ++V+DIDGTIT+SDV GL+MT SPG+ T+H GICSLL M +E
Sbjct: 703 RFRGDPRVLVAECFAFAFDARDRLLVMDIDGTITKSDVQGLIMTFSPGM-TDHLQPGICSLLHHMSNE 769
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A835ZF08_9STRA (LNS2 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF08_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 7.640e-9 Identity = 37/71 (52.11%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 25 DPRVLVAECFAFVWDVNTP-MIVVDIDGTITRSDVSGLMMTLS------PGLVTNHNHEGICSLLARMVDE 216
DPRVLVA+C AF D ++VVDIDGTITRSD GL+MTL PG V +H G+ SLL + E
Sbjct: 635 DPRVLVADCLAFAMDAAAARVVVVDIDGTITRSDAHGLLMTLRLLMMLRPGTV-DHLQPGVYSLLHHVAAE 704
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A7S3Y642_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y642_HETAK) HSP 1 Score: 57.8 bits (138), Expect = 4.680e-8 Identity = 27/62 (43.55%), Postives = 42/62 (67.74%), Query Frame = 1
Query: 31 RVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVDE 216
R++ AE FVWDV+ +++ DIDGTIT++DV G + T + TN H+GIC L+ +V++
Sbjct: 130 RLIHAETSCFVWDVDCRIVLCDIDGTITKTDVGGFVGTSTNPEDTNFVHDGICPFLSDLVED 191
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A0S4J4C7_BODSA (Lipin, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4J4C7_BODSA) HSP 1 Score: 52.4 bits (124), Expect = 3.820e-6 Identity = 29/71 (40.85%), Postives = 39/71 (54.93%), Query Frame = 1
Query: 1 LPPPRYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVD 213
LPPP V C FVW + ++V D+DGTIT+SDV G +M L + H G+CSL +R+ D
Sbjct: 159 LPPPPSSDAEAASVVTCNLFVWPHDAKIVVSDVDGTITKSDVLGHIMPL---FGKDWTHAGLCSLYSRIAD 226
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A2R5G6Z4_9STRA (Phosphatidate phosphatase LPIN3 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G6Z4_9STRA) HSP 1 Score: 50.4 bits (119), Expect = 1.820e-5 Identity = 25/65 (38.46%), Postives = 37/65 (56.92%), Query Frame = 1
Query: 31 RVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLM---MTLSPGLVTNHNHEGICSLLARMVDE 216
R+ E ++WD + ++V DIDGTITRSDV G++ + G H H G+C L ++DE
Sbjct: 125 RLNYVEALFWLWDSSDSIVVSDIDGTITRSDVGGMINGVLGARMGWKKGHAHPGVCFLYNHLIDE 189
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A7R9ZII4_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZII4_9STRA) HSP 1 Score: 50.1 bits (118), Expect = 2.550e-5 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 7 PPRYLR-DPRVLVAECFA--FVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARM 207
P RYL D R ++ +A FVW +T +++ DIDGTIT+S+V G+M T+ H H+GIC L+ +
Sbjct: 195 PIRYLLLDERQVIGVAYANIFVWSNDTRIVLADIDGTITKSNVRGIMDTILTEKY-RHCHDGICDFLSNL 263
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Match: A0A090M7C8_OSTTA (Phosphatidate phosphatase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A090M7C8_OSTTA) HSP 1 Score: 48.5 bits (114), Expect = 8.980e-5 Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 1
Query: 52 FAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSPGLVTNHNHEGICSLLARMVD 213
F ++WD NT +IV D+DGT+TRSDV G L+P + + +H G+ SL + D
Sbjct: 339 FVYLWDWNTKLIVSDVDGTVTRSDVLG---QLAPMVGKDWSHAGVASLYNDITD 389 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60519.16692.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig60519.16692.1 >prot_Ecto-sp13_S_contig60519.16692.1 ID=prot_Ecto-sp13_S_contig60519.16692.1|Name=mRNA_Ecto-sp13_S_contig60519.16692.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=72bp LPPPRYLRDPRVLVAECFAFVWDVNTPMIVVDIDGTITRSDVSGLMMTLSback to top mRNA from alignment at Ecto-sp13_S_contig60519:44..259- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig60519.16692.1 ID=mRNA_Ecto-sp13_S_contig60519.16692.1|Name=mRNA_Ecto-sp13_S_contig60519.16692.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60519:44..259- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig60519:44..259- >mRNA_Ecto-sp13_S_contig60519.16692.1 ID=mRNA_Ecto-sp13_S_contig60519.16692.1|Name=mRNA_Ecto-sp13_S_contig60519.16692.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=216bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60519:44..259- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |