mRNA_Ecto-sp13_S_contig60506.16690.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: A0A6H5KF61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF61_9PHAE) HSP 1 Score: 145 bits (366), Expect = 2.790e-43 Identity = 70/74 (94.59%), Postives = 73/74 (98.65%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKIGMS 222
ENYPSFLLLLGLAAINRP +AGVAGAIRLAGFVAYVIGYRTGNP+KRHKGAFGYIGLIT+LGCAIESAVKIGMS
Sbjct: 69 ENYPSFLLLLGLAAINRPIVAGVAGAIRLAGFVAYVIGYRTGNPEKRHKGAFGYIGLITMLGCAIESAVKIGMS 142
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: D7FIN3_ECTSI (Microsomal Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN3_ECTSI) HSP 1 Score: 137 bits (344), Expect = 6.050e-40 Identity = 64/73 (87.67%), Postives = 71/73 (97.26%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKIGM 219
ENYPSFLLLLGLAAINRPTIAGVAGA+RLAGFVAYVIGYRTG+P+KRH+GAFGYIGL+T+LGCAIES VK+ M
Sbjct: 69 ENYPSFLLLLGLAAINRPTIAGVAGAVRLAGFVAYVIGYRTGDPEKRHRGAFGYIGLLTMLGCAIESVVKVYM 141
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: D7FIN2_ECTSI (Microsomal Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIN2_ECTSI) HSP 1 Score: 111 bits (277), Expect = 9.580e-30 Identity = 52/74 (70.27%), Postives = 59/74 (79.73%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKIGMS 222
ENYP FLLLLGLAAINRP A VAGAIR+AGF+ YVI YR+G PD R KGAFGYIGL +LGCA+E K+ +S
Sbjct: 69 ENYPQFLLLLGLAAINRPKFAAVAGAIRVAGFIVYVITYRSGGPDNRRKGAFGYIGLFMMLGCALEFTTKLCIS 142
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: A0A7T1BY91_PROCL (Microsomal Glutathione S-transferase n=1 Tax=Procambarus clarkii TaxID=6728 RepID=A0A7T1BY91_PROCL) HSP 1 Score: 89.0 bits (219), Expect = 2.990e-21 Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKI 213
ENYP FLL+LGL +I P I+ + GA+ LAG +AY GY TG P+ R GAFGYIGL T++GCAI+ I
Sbjct: 43 ENYPQFLLMLGLGSIKYPLISSIGGAVWLAGRIAYFEGYSTGKPENRRLGAFGYIGLFTMMGCAIKGIYDI 113
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: A0A1V9Y7C0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7C0_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 2.040e-19 Identity = 39/71 (54.93%), Postives = 51/71 (71.83%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKI 213
EN P F LL ++I RP A +AG IR+AGF+AYV GY TG+P KR GAFGY+GL +G +IE+AV++
Sbjct: 70 ENLPVFFTLLATSSIFRPGYAAIAGGIRVAGFIAYVQGYATGDPTKRMNGAFGYLGLFAAIGLSIEAAVRL 140
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: R7UT15_CAPTE (Uncharacterized protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UT15_CAPTE) HSP 1 Score: 84.0 bits (206), Expect = 4.980e-19 Identity = 38/71 (53.52%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKI 213
E YP FL+LL L I PT+A AGA+ + Y +GY TG+P KR++GAFGY+GL+TLLGCAI +K+
Sbjct: 64 EGYPVFLMLLLLGGIPHPTLAAGAGALYQLSRIVYALGYYTGDPSKRNRGAFGYLGLLTLLGCAISLGLKL 134
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: H3GBW9_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBW9_PHYRM) HSP 1 Score: 84.0 bits (206), Expect = 6.240e-19 Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKI 213
EN P F +L ++I RPTIA VAG +R+AGFV YV GY +G+P KR +G FGY+G + +LG ++E+A+++
Sbjct: 73 ENLPLFYAMLATSSIYRPTIAAVAGVVRIAGFVMYVKGYSSGDPGKRRQGNFGYLGTLVMLGLSLEAALRL 143
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: A0A225WXS0_9STRA (Microsomal Glutathione S-transferase n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WXS0_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 6.240e-19 Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKI 213
E+ P F +L ++I RPTIA AG +RLAGFV YV GY +G+P KR KG FGY+G++ +LG ++E+A+++
Sbjct: 73 EHLPLFYAMLATSSIYRPTIAAAAGVVRLAGFVMYVKGYSSGDPGKRRKGNFGYLGMLVMLGLSLEAALRL 143
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: A0A817NJP5_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817NJP5_9BILA) HSP 1 Score: 82.8 bits (203), Expect = 9.630e-19 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKI 213
ENYP FLL+LGL +I P I+ + G I L G + Y GY +G P+KR GAFGYIG T++GCAI++ +
Sbjct: 50 ENYPQFLLMLGLGSIQYPLISSIGGFIWLLGRIVYFHGYSSGQPEKRQYGAFGYIGFFTMMGCAIKTVYNL 120
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Match: A0A817EKL4_9BILA (Hypothetical protein n=3 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A817EKL4_9BILA) HSP 1 Score: 82.8 bits (203), Expect = 1.860e-18 Identity = 36/71 (50.70%), Postives = 48/71 (67.61%), Query Frame = 1
Query: 1 ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGAFGYIGLITLLGCAIESAVKI 213
ENYP FLL+LGL +I P I+ + G I L G + Y GY +G P+KR GAFGYIG T++GCAI++ +
Sbjct: 76 ENYPQFLLMLGLGSIQYPLISSIGGFIWLLGRIVYFHGYSSGQPEKRQYGAFGYIGFFTMMGCAIKTVYNL 146 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60506.16690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig60506.16690.1 >prot_Ecto-sp13_S_contig60506.16690.1 ID=prot_Ecto-sp13_S_contig60506.16690.1|Name=mRNA_Ecto-sp13_S_contig60506.16690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=75bp ENYPSFLLLLGLAAINRPTIAGVAGAIRLAGFVAYVIGYRTGNPDKRHKGback to top mRNA from alignment at Ecto-sp13_S_contig60506:38..827- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig60506.16690.1 ID=mRNA_Ecto-sp13_S_contig60506.16690.1|Name=mRNA_Ecto-sp13_S_contig60506.16690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=790bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60506:38..827- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig60506:38..827- >mRNA_Ecto-sp13_S_contig60506.16690.1 ID=mRNA_Ecto-sp13_S_contig60506.16690.1|Name=mRNA_Ecto-sp13_S_contig60506.16690.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=225bp|location=Sequence derived from alignment at Ecto-sp13_S_contig60506:38..827- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |