mRNA_Ecto-sp13_S_contig605.16687.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig605.16687.1
Unique NamemRNA_Ecto-sp13_S_contig605.16687.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: D8LR53_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LR53_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 3.100e-85
Identity = 144/145 (99.31%), Postives = 145/145 (100.00%), Query Frame = 2 
Query:  308 MDQGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVVD 742
            MDQGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVV+
Sbjct:    1 MDQGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVVN 145
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A835YSA8_9STRA (ATPase, V1/A1 complex, subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSA8_9STRA)

HSP 1 Score: 186 bits (471), Expect = 3.950e-55
Identity = 100/143 (69.93%), Postives = 119/143 (83.22%), Query Frame = 2 
Query:  308 MDQGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSV 736
            M+ G+SNQIRQM NFILQEAHEKA EI +KTEHDFNLEKQM+VH+AKLKIQEEY QK+KDR +QDRI+RS M+G SRVKKMT+RD LLQ LLA +T  I KV+  ++YP LLK L+VQ +IKIEE  + V  R+ADISA+KSV
Sbjct:    1 MESGSSNQIRQMVNFILQEAHEKAVEIKLKTEHDFNLEKQMLVHNAKLKIQEEYVQKDKDRAVQDRIARSGMVGASRVKKMTARDQLLQSLLAETTATIDKVAHSAEYPALLKGLLVQGLIKIEESDVIVHVRKADISAMKSV 143
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A835YLP4_9STRA (ATPase, V1/A1 complex, subunit E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLP4_9STRA)

HSP 1 Score: 178 bits (452), Expect = 3.060e-52
Identity = 98/144 (68.06%), Postives = 119/144 (82.64%), Query Frame = 2 
Query:  308 MDQGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQ-YPTLLKALIVQSMIKIEEDKITVICREADISAVKSV 736
            M+ G+++QIRQM NFILQEAHEKA EI +KTEHDFNLEKQM+VH+AKLKIQEEY QK+KDR +QDRI+RS M+G SRV+KMTSRD LLQ LLA +T  I KVS  +  YP LL+ L+VQ +IKIEED +TV  R AD++A+KSV
Sbjct:    1 MEAGSASQIRQMVNFILQEAHEKAVEIKLKTEHDFNLEKQMLVHNAKLKIQEEYVQKDKDRAVQDRIARSGMVGTSRVQKMTSRDQLLQTLLADTTATIDKVSHSADAYPKLLRTLLVQGLIKIEEDDVTVHVRTADVAAMKSV 144
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: B7G7X7_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G7X7_PHATC)

HSP 1 Score: 168 bits (426), Expect = 2.280e-48
Identity = 88/143 (61.54%), Postives = 113/143 (79.02%), Query Frame = 2 
Query:  320 ASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVVDVS 748
            A++QIRQM NFILQEAHEKANEI +KTEHDFNLEKQ +VH AKL IQ+E+T+KEKDRE+Q RI+RS  IG  RVKKM  RD+LLQ+L+A +  +   V++G  YP LL+ LIVQ +IKIEE ++TV CR  DI  ++ ++DV+
Sbjct:    3 ATDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNIQDEFTKKEKDREVQQRIARSAEIGECRVKKMKIRDDLLQKLVADAGAKCAVVARGQNYPQLLQKLIVQGLIKIEEMEVTVFCRNEDIGTIEKILDVA 145
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A6U0FKI3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0FKI3_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.420e-48
Identity = 88/140 (62.86%), Postives = 111/140 (79.29%), Query Frame = 2 
Query:  320 ASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVV 739
            AS+QIRQM NFILQEAHEKANEI +KTEHDFNLEKQ +VH AKL +QEE+ +KEKDRE+Q+RI+RS  IG  RVKKM  RD LLQ+L++ + E+   V++G  YP LL+ LIVQ +IKIEE+ +T+  RE DIS VK ++
Sbjct:    2 ASDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNVQEEFAKKEKDREVQERIARSAEIGECRVKKMKLRDGLLQQLISEAGEKCGMVARGQNYPHLLQKLIVQGLIKIEENTVTIYTREEDISVVKQIL 141
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A7S1CYN7_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYN7_CYCTE)

HSP 1 Score: 167 bits (424), Expect = 4.560e-48
Identity = 89/140 (63.57%), Postives = 110/140 (78.57%), Query Frame = 2 
Query:  320 ASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVV 739
            AS+QIRQM NFILQEAHEKANEI +KTEHDFNLEKQ +VH AKL IQ+E+T+KEKDRE+Q+RISRS  IG  RVKKMT RD LLQ LL+ +  +   V+KG  YP L++ LIVQ +IKIEE+++ V CR  D+  V+ V+
Sbjct:    2 ASDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNIQDEFTKKEKDREVQERISRSAEIGECRVKKMTLRDELLQTLLSEAGAKCAVVAKGQNYPQLVQKLIVQGLIKIEENEVVVYCRGEDVETVEEVL 141
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A6V1P8N5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P8N5_HETAK)

HSP 1 Score: 164 bits (415), Expect = 9.660e-47
Identity = 85/139 (61.15%), Postives = 111/139 (79.86%), Query Frame = 2 
Query:  314 QGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVK 730
            +  S+QIRQM NFILQEAHEKANEI +KTEHDFNLEKQM+VH+AKL+IQEEY QK+KD E+Q+RI RS+ IG +RV+KM +RD +LQ L+  +   +  +S+   Y +LLK LIVQS+IKIEEDK+ ++ RE D++ VK
Sbjct:    2 ENTSSQIRQMVNFILQEAHEKANEIRLKTEHDFNLEKQMLVHNAKLRIQEEYAQKDKDLEVQERIVRSSKIGEARVQKMVARDEVLQGLIETAKSRLNDISQTKHYESLLKNLIVQSLIKIEEDKVILVVREQDVAGVK 140
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A1Z5K7N0_FISSO (V-type H+-transporting ATPase subunit E n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7N0_FISSO)

HSP 1 Score: 162 bits (411), Expect = 4.210e-46
Identity = 83/140 (59.29%), Postives = 111/140 (79.29%), Query Frame = 2 
Query:  320 ASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVV 739
            A++QIRQM NFILQEAHEKANEI +KTEHDFNLEKQ +VH AKL IQE++ +KEKDREIQ+RI+RST IG +RVKKM  RD+LL +L++ +      V++G  YP LL+ LIVQ +IKIEE+++ + CR  D++ V+ ++
Sbjct:    3 AADQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLSIQEDFAKKEKDREIQERIARSTEIGETRVKKMKIRDDLLNKLISDAGARCAVVARGQNYPQLLQKLIVQGLIKIEENEVVIFCRSEDVAVVEKIL 142
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A7S1VN83_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VN83_9STRA)

HSP 1 Score: 163 bits (413), Expect = 5.760e-46
Identity = 89/147 (60.54%), Postives = 112/147 (76.19%), Query Frame = 2 
Query:  299 AVTMDQGASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVV 739
            ++TM   AS+QIRQM NFILQEAHEKANEI +KTEHDFNLEKQ +VH AKL +QEE+ +KEKDRE+Q+RI+RS  IG  RVKKM  RD+LL  LL+ +  +   V++G  YP LL+ LIVQ +IKIEED++ V CR  DI  V+ V+
Sbjct:   34 SITM---ASDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNVQEEFAKKEKDREVQERIARSAEIGECRVKKMKIRDDLLHTLLSEAGAKCAVVARGQNYPQLLQKLIVQGLIKIEEDEVLVYCRGEDIKMVEKVL 177
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BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Match: A0A7S1YZ44_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZ44_TRICV)

HSP 1 Score: 162 bits (410), Expect = 5.780e-46
Identity = 85/140 (60.71%), Postives = 109/140 (77.86%), Query Frame = 2 
Query:  320 ASNQIRQMANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDREIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTLLKALIVQSMIKIEEDKITVICREADISAVKSVV 739
            AS+QIRQM NFILQEAHEKANEI +KTEHDFNLEKQ +VH AKL IQEE+ +KEKDREIQ+RI RS  IG  RVKKM  RD+LLQ L++ +  +   +++G  Y  LL+ LIVQ ++KIEE+++T+  RE D+S VK ++
Sbjct:    2 ASDQIRQMVNFILQEAHEKANEIRVKTEHDFNLEKQTLVHEAKLNIQEEFAKKEKDREIQERIQRSAEIGECRVKKMKVRDDLLQTLVSEAGSKCAMIARGPNYAHLLQKLIVQGLVKIEENEVTIFTREEDVSVVKQIL 141
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig605.16687.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR53_ECTSI3.100e-8599.31Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YSA8_9STRA3.950e-5569.93ATPase, V1/A1 complex, subunit E n=1 Tax=Tribonema... [more]
A0A835YLP4_9STRA3.060e-5268.06ATPase, V1/A1 complex, subunit E n=1 Tax=Tribonema... [more]
B7G7X7_PHATC2.280e-4861.54Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]
A0A6U0FKI3_9STRA4.420e-4862.86Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S1CYN7_CYCTE4.560e-4863.57Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6V1P8N5_HETAK9.660e-4761.15Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A1Z5K7N0_FISSO4.210e-4659.29V-type H+-transporting ATPase subunit E n=2 Tax=Fi... [more]
A0A7S1VN83_9STRA5.760e-4660.54Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A7S1YZ44_TRICV5.780e-4660.71Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig605contigEcto-sp13_S_contig605:975..3781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score261.5
Seed ortholog evalue3.1e-67
Seed eggNOG ortholog2880.D8LR53
Preferred nameATP6V1E1
Model size781
KEGG koko:K02150
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000041,GO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000325,GO:0000329,GO:0000331,GO:0001669,GO:0001763,GO:0002009,GO:0003006,GO:0003674,GO:0003735,GO:0003824,GO:0005198,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005902,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006885,GO:0006950,GO:0006952,GO:0006970,GO:0006996,GO:0007030,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007424,GO:0007430,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0008553,GO:0009266,GO:0009409,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009651,GO:0009653,GO:0009705,GO:0009719,GO:0009725,GO:0009735,GO:0009790,GO:0009791,GO:0009793,GO:0009832,GO:0009888,GO:0009894,GO:0009987,GO:0010033,GO:0010154,GO:0010243,GO:0010256,GO:0010506,GO:0012505,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016241,GO:0016324,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019725,GO:0019829,GO:0019899,GO:0022414,GO:0022626,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030139,GO:0030141,GO:0030641,GO:0031090,GO:0031164,GO:0031224,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033176,GO:0033178,GO:0033180,GO:0033181,GO:0033572,GO:0034220,GO:0035239,GO:0035295,GO:0036442,GO:0042221,GO:0042546,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042742,GO:0042788,GO:0042886,GO:0042995,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043434,GO:0043492,GO:0044085,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044459,GO:0044464,GO:0044769,GO:0044877,GO:0045176,GO:0045177,GO:0045184,GO:0045851,GO:0046961,GO:0048316,GO:0048608,GO:0048729,GO:0048731,GO:0048754,GO:0048856,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051117,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051704,GO:0051707,GO:0051716,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0060429,GO:0060446,GO:0060541,GO:0060562,GO:0061138,GO:0061458,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071554,GO:0071669,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072512,GO:0090662,GO:0097223,GO:0097708,GO:0098542,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0098858,GO:0099131,GO:0099132,GO:0099503,GO:0120025,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600,GO:1990904
Exons4
EggNOG free text desc.Produces ATP from ADP in the presence of a proton gradient across the membrane
EggNOG OGsCOG1390@1,KOG1664@2759
Cds size588
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig605.16687.1prot_Ecto-sp13_S_contig605.16687.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig605 978..3591 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463842.5413778-UTR-Ecto-sp13_S_contig605:974..9771681463842.5413778-UTR-Ecto-sp13_S_contig605:974..977Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig605 975..977 -
1681463842.601083-UTR-Ecto-sp13_S_contig605:3591..37811681463842.601083-UTR-Ecto-sp13_S_contig605:3591..3781Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig605 3592..3781 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463842.5558507-CDS-Ecto-sp13_S_contig605:977..11451681463842.5558507-CDS-Ecto-sp13_S_contig605:977..1145Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig605 978..1145 -
1681463842.5668454-CDS-Ecto-sp13_S_contig605:1797..19001681463842.5668454-CDS-Ecto-sp13_S_contig605:1797..1900Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig605 1798..1900 -
1681463842.5783849-CDS-Ecto-sp13_S_contig605:2833..31431681463842.5783849-CDS-Ecto-sp13_S_contig605:2833..3143Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig605 2834..3143 -
1681463842.5904148-CDS-Ecto-sp13_S_contig605:3584..35911681463842.5904148-CDS-Ecto-sp13_S_contig605:3584..3591Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig605 3585..3591 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig605.16687.1

>prot_Ecto-sp13_S_contig605.16687.1 ID=prot_Ecto-sp13_S_contig605.16687.1|Name=mRNA_Ecto-sp13_S_contig605.16687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=196bp
MGAPERREQPAAAAAATGHRERGRRLDRKTSHNQTAAVTMDQGASNQIRQ
MANFILQEAHEKANEINIKTEHDFNLEKQMIVHSAKLKIQEEYTQKEKDR
EIQDRISRSTMIGNSRVKKMTSRDNLLQELLAASTEEITKVSKGSQYPTL
LKALIVQSMIKIEEDKITVICREADISAVKSVVDVSTTTLLRGSA*
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mRNA from alignment at Ecto-sp13_S_contig605:975..3781-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig605.16687.1 ID=mRNA_Ecto-sp13_S_contig605.16687.1|Name=mRNA_Ecto-sp13_S_contig605.16687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=2807bp|location=Sequence derived from alignment at Ecto-sp13_S_contig605:975..3781- (Ectocarpus species13 EcNAP12_S_4_19m)
CTTTGGACGTTGGTGTTATGACTGCGACTGCTTCTGCCCAGGCCTTTGCA
ATACCGCCCAACAGCTCTTGCCCGTGGTAAAGACAGCGGTCGGCACGCCG
TCAGCAGTCAGCAGCTCTCCCTGCTCTCCCTTCCAAAACAGAACCCGGCG
GCCTGCCCATGATATTGGTTCCAGTACATTTCCAGGAGGAATGGGAGGTG
GGGAGAGGGCGGCGCAAAAATACAGCTACCTACTGTTGACAAGCCCTGTC
TAGGCGTATTCCCCTTCGGATTGGATTTACTTCGAAATGTTATGCGTGCC
CCCCGCAAACTGTATGCCTTCGATCGCCCGGCTGTAGATCCCTGCAGCTC
GCTCGATCAGCACACGACACACGACACACAGACAGGCGGCGGGGGCGCGA
GCAGTGGGTTACACTACTGGTATACTCTTGGGGCTAGAGACGTACGGCAG
TTTGTGATTCGCACGTTTTTCGTCCGTAGTCTGCAACTCCATGACGACAC
CCCAACCTTCCCATGAAAGGTCTCGGACGGCGAACAAAGAGCCACCTCGG
CTTCCGAACTCATTGACAACAACTAATTATATTAACCTCCCGGTGCTCTG
CACCATGCATGCAAACGCGCCAACCAAATCCACGACAGCGCCTGAAAGAC
GAGAGCAGCCAGCAGCAGCGGCGGCGGCGACAGGACACAGGGAAAGAGGG
CGGCGGCTGGACAGGAAGACCTCGCACAACCAAACAGCCGCAGTAACCAT
GGACCAAGGGGCATCGAACCAGATCCGGCAGATGGCCAACTTCATCCTTC
AGGAGGCCCACGAGAAGGCGAACGAGATCAATATCAAGACGGAGCACGAC
TTCAACCTCGAGAAGCAGATGATCGTCCACAGCGCGAAACTCAAGATCCA
GGAGGAGTACACGCAGAAGGAGAAGGACCGGGAAATCCAGGACCGAATGT
GAGGGCCGTAGTGAGAGACAGCGGGAACGGAAACCAAGGGACAGCAGTGA
GAGGCATGAAGAACTGGACAAGTAGTCGAGACCTGGGGTACACAGCGCAT
GTTGCCGTCACTCCCGCGGTAGAGTTGTCGTCTCTCAGAAGGGAAGAGCT
GTCGAATACAGTATGCACACACACGGCAGGATGCGTTTTCTGAGGCCGCT
TAGCAGCAGCGCTCTCCCGCACCCCGACCTTCTCTTTGGCAAGGGAGTAG
AGCTCGCGCGCACCCCCCCCACCGACCCGCGTCAAGGAGATATAACATGC
TTTCGTTGTACAGCTTGCTGGGGCTGTCGGTGGTATTCCAAAGAAACACT
CAGGAAACGTGTATATACTGGCAGAAATAGACCCTTCAGGGGAATGGCAG
TGGAGAGAGCCTCGGCATGCATGGCAGAGATGCATATGATGGACAAAGTG
ATGAAGCCAAACGGAATGTCGGCCAGAGAGTAATCACCCGCAGGGGAAAA
ATTCGAGCACAGGAGTAGACAACTGCGAGAAGAATGCTATCTAGCTCTGT
TCCGTCTTTCCTTGTATAAGTGCTCTGGATCCGGAGACTGGACCCTGCAT
TTCAATATCCTGGGCTGCGAAAAAGCAAAAGCATGCTCGCGTTTTTTCTG
CCGCCATTGGACTGACGCCTCCTCTGCGCGGATGGACGTCGTTGTCATTT
TTTTTTTTGTTGCCGCCATCGGCCGTGCTGTTTGGTTCTGCCTGTGCTCT
TGTCTATTTGCGTGTCTGCCTCTGTCTCCGTCTCAATAATCTGTCTCTAA
TCGCTCTCTGTCTCTGTATGTGCCTGTACCTCGGCCTGTCTCTGTCTATG
TCCGTCACCCTCTGTCTCTCTCTTATCCGGCACAAAATCGATAACCACGC
GACGTGCGTGTTGTGTCTCTCGTGGATTCAGCTCGCGGTCGACGATGATC
GGGAACTCTCGCGTCAAGAAGATGACCTCCAGGGACAACTTGCTGCAGGA
ATTGCTCGCGGCATCGACGGAGGAAATCACGAAGGTACAGCAGCAGCACG
CATCAACACGGAACATGAACACTTTCGCAGTAGAAAAGAAGAGCGTTCGC
ATGCCTGTGCTGCTCAAGGTTTGGCGTCTTGCAATCGGTCGGCGTTTCAA
GCATTGGCGGTGCTGACGCCGAGAAACATGCCTCAACATTCACTGTACAC
AATTGGGACACGAACACATGTTTGATAATCATGTGTCGAGTTCTTGACCG
GTGACCTCCAAAACAGTCCTTCTACGTGGTAGCTCACGTCGTACCTTGCC
GGTCGCACTCACGCCTCAAAGCGGGACGGACGTTCCTCCGCACGTCTTTG
TCATGCGCGACTCTGTCCCTGTTCCGTGAAGACACACGGTCACGCATTTT
TCGCCAGGACTACGGCACAAACCGAGTGTAGTACCCCCGCCTTGTGCTTT
GTTGCTTCTGGTGTACTTGGGTGTGGCCTGCTTGTGTTGACGGAACCCTG
TTTGTTTTGGTATACCCTGGTGTGTCTTACTCCTTTCAACGGGGTGCGAC
TTATGGCGATGTTCGCCAAACCTGTGTCGAATCACCGTCACCACCTACAC
CACCCGCGTTCTTCCTGATCTTACCGCACCCATCTTGCCGTTTTCTCGCG
TTACGAAACGCCACACGCGATTTCCGCATGCACCAGGTGTCGAAGGGGAG
CCAGTACCCCACGCTCCTCAAGGCTCTGATCGTGCAGAGCATGATCAAGA
TCGAGGAGGACAAGATCACGGTCATTTGCAGGGAGGCGGACATTTCGGCC
GTCAAGTCCGTCGTCGACGTGAGTACGACAACGCTCCTCAGGGGGAGCGC
CTAAATG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig605:975..3781-

>mRNA_Ecto-sp13_S_contig605.16687.1 ID=mRNA_Ecto-sp13_S_contig605.16687.1|Name=mRNA_Ecto-sp13_S_contig605.16687.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=588bp|location=Sequence derived from alignment at Ecto-sp13_S_contig605:975..3781- (Ectocarpus species13 EcNAP12_S_4_19m)
ATGGGAGCGCCTGAAAGACGAGAGCAGCCAGCAGCAGCGGCGGCGGCGAC
AGGACACAGGGAAAGAGGGCGGCGGCTGGACAGGAAGACCTCGCACAACC
AAACAGCCGCAGTAACCATGGACCAAGGGGCATCGAACCAGATCCGGCAG
ATGGCCAACTTCATCCTTCAGGAGGCCCACGAGAAGGCGAACGAGATCAA
TATCAAGACGGAGCACGACTTCAACCTCGAGAAGCAGATGATCGTCCACA
GCGCGAAACTCAAGATCCAGGAGGAGTACACGCAGAAGGAGAAGGACCGG
GAAATCCAGGACCGAATCTCGCGGTCGACGATGATCGGGAACTCTCGCGT
CAAGAAGATGACCTCCAGGGACAACTTGCTGCAGGAATTGCTCGCGGCAT
CGACGGAGGAAATCACGAAGGTGTCGAAGGGGAGCCAGTACCCCACGCTC
CTCAAGGCTCTGATCGTGCAGAGCATGATCAAGATCGAGGAGGACAAGAT
CACGGTCATTTGCAGGGAGGCGGACATTTCGGCCGTCAAGTCCGTCGTCG
ACGTGAGTACGACAACGCTCCTCAGGGGGAGCGCCTAA
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