prot_Ecto-sp13_S_contig60474.16686.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60474.16686.1
Unique Nameprot_Ecto-sp13_S_contig60474.16686.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length78
Homology
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BLAST of mRNA_Ecto-sp13_S_contig60474.16686.1 vs. uniprot
Match: A0A6H5JDL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDL5_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.980e-23
Identity = 45/51 (88.24%), Postives = 47/51 (92.16%), Query Frame = 0 
Query:   29 LGAQGG-HVDVIKWGRENGGGCNSEARYWAAVGGHVHVLEYFNTIGLSWGE 78
            +G+ GG HVDVIKWGRENGGGCNSEA YWAAVGGHVHV EYFNTIGLSWGE
Sbjct:  210 VGSPGGEHVDVIKWGRENGGGCNSEAGYWAAVGGHVHVKEYFNTIGLSWGE 260
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BLAST of mRNA_Ecto-sp13_S_contig60474.16686.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 1.500e-18
Identity = 42/59 (71.19%), Postives = 42/59 (71.19%), Query Frame = 0 
Query:   20 SADLTRVCTLGAQGGHVDVIKWGRENGGGCNSEARYWAAVGGHVHVLEYFNTIGLSWGE 78
            SADLTRV               GRENGGGCNSEA YWAAVGGHVHVLEYFNTI LSWGE
Sbjct:  271 SADLTRVXXXXXXXXXXXXXXXGRENGGGCNSEAGYWAAVGGHVHVLEYFNTIWLSWGE 329
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60474.16686.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JDL5_9PHAE1.980e-2388.24Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FH49_ECTSI1.500e-1871.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.604
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 2..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60474contigEcto-sp13_S_contig60474:594..827 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60474.16686.1mRNA_Ecto-sp13_S_contig60474.16686.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60474 594..827 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60474.16686.1 ID=prot_Ecto-sp13_S_contig60474.16686.1|Name=mRNA_Ecto-sp13_S_contig60474.16686.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=78bp
NAARHGHLHLLRWAFASGCSADLTRVCTLGAQGGHVDVIKWGRENGGGCN
SEARYWAAVGGHVHVLEYFNTIGLSWGE
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