prot_Ecto-sp13_S_contig604.16674.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig604.16674.1
Unique Nameprot_Ecto-sp13_S_contig604.16674.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length392
Homology
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: A0A6H5KYW5_9PHAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYW5_9PHAE)

HSP 1 Score: 338 bits (866), Expect = 9.110e-112
Identity = 234/290 (80.69%), Postives = 239/290 (82.41%), Query Frame = 0
Query:    1 MQQLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHAAAVDQEAQQQMHLMAMQHALGQHMQNTLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LMQADPQMAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG----VAAAGQGEADIEQANAMAAMQSAMMSNPAMLQ 285
            MQQLQLQQA IQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIF+LEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHA A+DQ+AQ QMHLMAMQH+LGQHMQNTLLQXXXXXXXXXXXXXXXXXXXXX                         LMQADPQMA            X      XXXXXXXXXX     VAAAGQGEADIEQANA+AAMQSAMMSNPAMLQ
Sbjct:   10 MQQLQLQQAQIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFILEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHATAIDQDAQLQMHLMAMQHSLGQHMQNTLLQXXXXXXXXXXXXXXXXXXXXXSAEGNGAAGATPEALAAQAALQQQALMQADPQMAMQLQVLWQQQAQXAMFLQQXXXXXXXXXXXXXXXVAAAGQGEADIEQANAIAAMQSAMMSNPAMLQ 299          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: D8LGF1_ECTSI (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGF1_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.830e-102
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0
Query:    1 MQQLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHAAAVDQEAQQQMHLMAMQHALGQHM 163
            MQQLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHAAAVDQEAQQQMHLMAMQHALGQHM
Sbjct:   10 MQQLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHAAAVDQEAQQQMHLMAMQHALGQHM 172          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: A0A7S2CAV2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAV2_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.910e-37
Identity = 79/126 (62.70%), Postives = 94/126 (74.60%), Query Frame = 0
Query:   21 FWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIA-EAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELK---KDDVGHAAAV 142
            FW     E+  IDP+++D+   ELPLARIKKIM+ ED++  E G  RFMI+AEAP++ AKACEIF LE+ M A + T ENKRRTLQRNDI MAVSK DTYDFLIDIVPR+ +K   KDDVG A  V
Sbjct:   37 FWQSRMQEINMIDPDQKDWSQPELPLARIKKIMKSEDEVKLELGGQRFMISAEAPVMFAKACEIFALELTMLAWNHTEENKRRTLQRNDIVMAVSKNDTYDFLIDIVPRDNVKPSKKDDVGSAMPV 162          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: A0A7S3YAQ4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAQ4_HETAK)

HSP 1 Score: 137 bits (345), Expect = 1.190e-35
Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = 0
Query:   14 EQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDI-AEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREE 130
            ++ R+  FWN+   E+  IDPEKEDFK  ELPLARIKKIMRLE+++ +E G  RFMI+AEAP+++AKA  +F  E+ +RA + T E KRRTLQR D+AMA++K+D YDFLIDIVPREE
Sbjct:   37 QEVRLQQFWNDHLVEIGGIDPEKEDFKTLELPLARIKKIMRLEEEVQSELGGFRFMISAEAPVLLAKAAALFTGELTIRAATHTEEAKRRTLQRQDLAMAMTKSDMYDFLIDIVPREE 154          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: T0Q5X3_SAPDV (CBFD_NFYB_HMF domain-containing protein n=7 Tax=Saprolegniaceae TaxID=4764 RepID=T0Q5X3_SAPDV)

HSP 1 Score: 139 bits (351), Expect = 1.350e-35
Identity = 70/115 (60.87%), Postives = 93/115 (80.87%), Query Frame = 0
Query:   18 INDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELK 132
            ++ FW     E++QIDPE +DFK H+LPLARIKKIM+ ++D+        MI+AEAP++ AKACE+F+LE+++RA   T ENKRRTLQRNDIAMA++KTDT+DFLIDIVPRE++K
Sbjct:   33 LHAFWQSQIHEISQIDPEVQDFKTHQLPLARIKKIMKSDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDTFDFLIDIVPREDIK 140          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: A0A2D4BX92_PYTIN (Nuclear transcription factor Y subunit C-4 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX92_PYTIN)

HSP 1 Score: 137 bits (346), Expect = 8.750e-35
Identity = 72/130 (55.38%), Postives = 98/130 (75.38%), Query Frame = 0
Query:    3 QLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELK 132
            QLQ Q+A +Q +  ++  FW     E++QIDP   DFK H+LPLARIKKIM+ +DD+        MI+AEAP++ AKACE+F+LE+++RA   T ENKRRTLQR+DIA A+SK+D +DFLIDIVPR+++K
Sbjct:   16 QLQSQRAQMQHQINQLAAFWQSQVQEISQIDPNTFDFKTHQLPLARIKKIMKTDDDVR-------MISAEAPVLFAKACEMFILELSLRAXYHTEENKRRTLQRSDIATAISKSDVFDFLIDIVPRDDVK 138          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: A0A662XQJ6_9STRA (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQJ6_9STRA)

HSP 1 Score: 134 bits (336), Expect = 3.230e-34
Identity = 67/115 (58.26%), Postives = 90/115 (78.26%), Query Frame = 0
Query:   18 INDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELK 132
            ++ FW     E++QIDP   DFK H+LPLARIKKIM+ ++D+        MI+AEAP++ AKACE+F+LE+++RA   T ENKRRTLQRNDIAMA++KTD +DFLIDIVPR+++K
Sbjct:   32 LHAFWQNQIQEISQIDPNAFDFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIK 139          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: M4BYU7_HYAAE (CBFD_NFYB_HMF domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYU7_HYAAE)

HSP 1 Score: 137 bits (344), Expect = 4.420e-34
Identity = 75/142 (52.82%), Postives = 100/142 (70.42%), Query Frame = 0
Query:   18 INDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELK---KDDVGHAAAVDQEAQQQMHLMAMQ 156
            ++ FW     +++QIDP   DFK H+LPLARIKKIM+ ++D+        MI+AEAP++ AKACE+F+LE+++RA   T ENKRRTLQRNDIAMA++KTD +DFLIDIVPR+++K   K  V   A   Q+ QQQ   M  Q
Sbjct:   46 LHAFWQHQIQDISQIDPNAFDFKTHQLPLARIKKIMKTDEDVR-------MISAEAPVLFAKACEMFILELSLRAWIHTEENKRRTLQRNDIAMAITKTDVFDFLIDIVPRDDIKPAKKGPVDPQAVYQQQLQQQQAAMLQQ 180          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: A0A8K1CIA2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIA2_PYTOL)

HSP 1 Score: 137 bits (344), Expect = 5.120e-34
Identity = 71/130 (54.62%), Postives = 98/130 (75.38%), Query Frame = 0
Query:    3 QLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELK 132
            QLQ Q+A +Q +  ++  FW     E++Q+DP   DFK H+LPLARIKKIM+ +DD+        MI+AEAP++ AKACE+F+LE+++RA   T ENKRRTLQR+DIA A+SK+D +DFLIDIVPR+++K
Sbjct:   55 QLQSQRAQMQHQMNQLAAFWQNQVQEISQVDPNTFDFKTHQLPLARIKKIMKTDDDVR-------MISAEAPVLFAKACEMFILEISLRAWYHTEENKRRTLQRSDIATAISKSDVFDFLIDIVPRDDVK 177          
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Match: A0A7S1TX78_9STRA (Hypothetical protein (Fragment) n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TX78_9STRA)

HSP 1 Score: 136 bits (343), Expect = 6.320e-34
Identity = 84/157 (53.50%), Postives = 109/157 (69.43%), Query Frame = 0
Query:   25 VETEMTQIDPEKEDFKNHELPLARIKKIMRLEDDIAE--AGAP--RFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENKRRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDD------VGHAAAVDQEAQQQMHLM--AMQHALGQHMQNTLLQ 169
            V  E+  I+P++EDFK+H LPLARIKKIM+ E++I      AP  RFMI+AEAPI+ AKACEIF+ E+  R+   T ENKRRTLQRNDI++AVSKTDT+DFLIDIVPREE+K  +      +  A+ +  + QQ  ++M   MQ A  Q MQ  + Q
Sbjct:    3 VMNEIQNINPDQEDFKSHALPLARIKKIMKSEEEILNDAPNAPNSRFMISAEAPIMFAKACEIFIAELTTRSWGHTEENKRRTLQRNDISVAVSKTDTFDFLIDIVPREEIKAGEEPVQRPINAASPLGAQQQQDPNVMYQQMQLAQAQQMQAQMAQ 159          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig604.16674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYW5_9PHAE9.110e-11280.69CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
D8LGF1_ECTSI1.830e-102100.00CBFD_NFYB_HMF domain-containing protein n=1 Tax=Ec... [more]
A0A7S2CAV2_9STRA5.910e-3762.70Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3YAQ4_HETAK1.190e-3561.02Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
T0Q5X3_SAPDV1.350e-3560.87CBFD_NFYB_HMF domain-containing protein n=7 Tax=Sa... [more]
A0A2D4BX92_PYTIN8.750e-3555.38Nuclear transcription factor Y subunit C-4 n=1 Tax... [more]
A0A662XQJ6_9STRA3.230e-3458.26CBFD_NFYB_HMF domain-containing protein n=1 Tax=No... [more]
M4BYU7_HYAAE4.420e-3452.82CBFD_NFYB_HMF domain-containing protein n=1 Tax=Hy... [more]
A0A8K1CIA2_PYTOL5.120e-3454.62Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1TX78_9STRA6.320e-3453.50Hypothetical protein (Fragment) n=4 Tax=Phaeomonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 318..380
NoneNo IPR availableCOILSCoilCoilcoord: 164..187
NoneNo IPR availablePANTHERPTHR10252:SF88NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-10-RELATEDcoord: 3..153
NoneNo IPR availablePANTHERPTHR10252HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATEDcoord: 3..153
IPR009072Histone-foldGENE3D1.10.20.10coord: 2..128
e-value: 2.5E-37
score: 129.6
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 18..122
IPR003958Transcription factor CBF/NF-Y/archaeal histone domainPFAMPF00808CBFD_NFYB_HMFcoord: 43..113
e-value: 3.1E-16
score: 59.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig604contigEcto-sp13_S_contig604:9237..13770 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig604.16674.1mRNA_Ecto-sp13_S_contig604.16674.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig604 9237..13788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig604.16674.1 ID=prot_Ecto-sp13_S_contig604.16674.1|Name=mRNA_Ecto-sp13_S_contig604.16674.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=392bp
MQQLQLQQAHIQREQARINDFWNEVETEMTQIDPEKEDFKNHELPLARIK
KIMRLEDDIAEAGAPRFMIAAEAPIIIAKACEIFVLEMAMRANSLTAENK
RRTLQRNDIAMAVSKTDTYDFLIDIVPREELKKDDVGHAAAVDQEAQQQM
HLMAMQHALGQHMQNTLLQEQQQQQQQQQQLQQQQAAGGGAEGNGAAGTT
PEALAAQAALQQQALMQADPQMAMQMQVLWQQQAQQALFLQQQQQQQQQQ
QQGVAAAGQGEADIEQANAMAAMQSAMMSNPAMLQQALANAGQPQQHQQE
QQQPQQQQQPQQQQPQQQQQQQQQLQNQQQLIHQHQQMLQAQQQQAQQAQ
QQLLQQQQAQQQQQAQLAQQAAQAQQQQHQAAMSQAPTNAQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003958CBFA_NFYB_domain