mRNA_Ecto-sp13_S_contig604.16673.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig604.16673.1
Unique NamemRNA_Ecto-sp13_S_contig604.16673.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A6H5L0B8_9PHAE (Nfu_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0B8_9PHAE)

HSP 1 Score: 814 bits (2103), Expect = 2.170e-292
Identity = 462/517 (89.36%), Postives = 468/517 (90.52%), Query Frame = 2
Query:  236 MMQARLVALAATALPAGAFXXXXXXXXXXXXXXXXXXAWPMAPPMMRVSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQHAGVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLDPLTLLMASGGEGGSAWKRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDDXXXHGXXPAGATXXXXAAESAEEALAAAVDEVELAYHESRLRGAVHAALILLQKNAEAAEASAAAP-----AAAESTAEVRAATAVLQRSPAADKGEVVAAVDTLCALAGDGSKDALDALVGFAASGEGPVPARRAAVAYIGGAADAAGSAGLEAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGELATREQDAVSLDEAREGEVEFEVAFEMSDAARKIRGRVAATGEEEVVTPAGVGPVWKQIQERDSNK 1771
            MMQA +VALAA ALP GAF     XXXXXX       AWPMAPP MRVSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQ A VPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAV+ALGGAASSLDPLTLLMASGGEGGSAWKRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDD+   HG    GAT    AAE AEEALAAAVDEVELAYHESRLRGAVHAAL LLQKNAEAAEAS          + ESTAEVRAAT VLQRSPAADKGEVVAAVDTLCALAGDGSKDALDALVGFAASGEGPVPARRAAVAYIGGA DAAGSAGL+AVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAAR VGELATREQDAVSLDEAREGEVEFEVAFEM+DAARKIR RVAA GEEEV T AGVGPVWKQIQERDSNK
Sbjct:    1 MMQAHVVALAAMALPVGAFFVMSPXXXXXXARGSAAAAWPMAPPTMRVSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQQAEVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVKALGGAASSLDPLTLLMASGGEGGSAWKRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDEDG-HGEELTGATSKKTAAEFAEEALAAAVDEVELAYHESRLRGAVHAALNLLQKNAEAAEASXXXXXXXXXTSGESTAEVRAATTVLQRSPAADKGEVVAAVDTLCALAGDGSKDALDALVGFAASGEGPVPARRAAVAYIGGAGDAAGSAGLKAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARVVGELATREQDAVSLDEAREGEVEFEVAFEMADAARKIRARVAAPGEEEVATAAGVGPVWKQIQERDSNK 516          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A1E7EQX7_9STRA (Nfu_N domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EQX7_9STRA)

HSP 1 Score: 197 bits (501), Expect = 1.010e-51
Identity = 190/538 (35.32%), Postives = 259/538 (48.14%), Query Frame = 2
Query:  377 VSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQHAGVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEAL-----GGAASSLDPLTL---LMASGGEGGSAW--KRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRY--PAEEG---GDDDXXXHGXXPAGATXXXXAAESAEEA--------LAAAVDEVELAY---------HESRLRGA-----VHAALILLQKNAEAAEASAAAPAAAESTAEVRAATAVLQRSPAADKGEVVAAVDTLCALA------GDGSKD-----ALDALVGF-AASGEGPVPARRAAVAYIGGAADAAGSAGLE-----------------AVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLR-DKSKLVRWRAARAVGELATREQDAVSLDEAR---EGEVEFEVAFEMSDAARKIRGRVAATGEE----EVVTPAGVGPVWKQIQERDSN 1768
            + GIESTPNPSSF   L + L G  S A + RG TYS        +  P+ I  +L+I G+DSVY +A  L +NKK SAKW++++P  +E+L     G +A  +  L L   L AS          + + M  + +R+Q+SN IPIQ+E     GT  R KL  +F E M E      D + FF GR+W+ RG+RY  P ++G   GDD     G           ++ + EE         L     EV+ AY          ESRL G      VH    +   + E                       V   SP +     +  VD  C LA      GD ++D     AL+ LV F ++S +G + ARR A+AY+GG A  A   G++                 AVS  F+ + N  +RRTAGDA SDLGD  A+P AV  L  D+SKLV+WRAAR +GELA   + A  L +      G+  FEVAFE+ DA RK++ R+          + V PA  GP+WKQIQER ++
Sbjct:   69 ILGIESTPNPSSFLIKLSRPLPGLTSLAGSLRGNTYSATAA----SAAPDEICSILQIDGIDSVYTMATILTVNKKASAKWESVLPLVLESLLEGDDGDSAQQVQELLLPGLLQASSSSSNLNQNDQTTTMGQVRMRIQLSNKIPIQIEGTGSLGTVQRLKLVPKFQEYMEELQ--QDDTIDFFAGRKWMDRGIRYYLPEDDGNDKGDDSHETFGNGSNSIDSFTYSSSTEEEKELLGLQFILQTEAKEVDDAYPPQRLARIVSESRLDGKGRSKDVHPTKKVTPLSVE-----------------------VESCSPQSPFDLTLEDVDRYCNLADGDYGNGDINQDSTHLEALNVLVEFVSSSNQGLLAARRNAIAYLGGTA--AAGPGIDNTQTDSTANVMNDRVFHAVSLAFQNEKNPMMRRTAGDAFSDLGDQRAVPYAVTALEGDRSKLVQWRAARILGELADSTEIAGFLKQQTFDGSGKYAFEVAFEIKDALRKVQARLRQNDNSNDGNKKVAPAPKGPIWKQIQERGAS 575          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A7S3VDY6_9STRA (Hypothetical protein n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDY6_9STRA)

HSP 1 Score: 182 bits (461), Expect = 3.710e-46
Identity = 173/517 (33.46%), Postives = 248/517 (47.97%), Query Frame = 2
Query:  368 MMRVSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQ--QHAGVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLDPLTLLM------ASGGEGGSAWKRSEMDG-IAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFV----------AGSGDEMAFFKGREWLPRGVRYPAEEGGDDDXXXHGXXPAGATXXXXAAESA---EEALAAAVDEVELAYHESRLRGAVHAA--------LILLQKNAEAAEASAAAPAAAESTAEVRAATAVLQRSPAADKGEVVAAVDTLCALAGDGSKDALDALVGFAASGEGPVPARRAAVAYIGGAADAA--------GSAGLE--AVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLR-DKSKLVRWRAARAVGELATREQDAVSLDEAR--EGEVEFEVAFEMSDAARKIRGRVAATGEEEVV---TPAGV--------GPVWKQIQE 1756
            M  +SGIESTPNPSSF   +     G    A + RG T++     +   H  +PE I  +L++ GV SV+A+A  L +NKK SAKW+ ++P    AL G  +  +   +L+       S    GS    S   G + +R+Q SN IPIQVE     GT  RRKLS +F E+M   +          + + +++ FF GR+W+ RG+RY  E   DD         A A+      +     E  L    DE++ AY   RL G V  +          L  +N E        P+      +V     +L           + AVD  C LA  G + AL  L  F +S +G +PARR A+A++GG  D           S+ L   A+ +  + + +  +RRTAGDALSDLGDP AIP A+  +  D+S+LV+WRAAR +GE     +    L +A     +  F++AFE+ DA RK++ RV    E +       A +        GP+WKQIQE
Sbjct:   62 MAVISGIESTPNPSSFLIRVAAPPTGLEDLAGSLRGKTFASGSFTRVSDHDRLPE-IASILDVDGVVSVFAMATALTINKKASAKWEVVLPLVTTALIGNDNDQNDQDILLQGLLALTSAANAGSPQSASASAGQVRMRMQFSNKIPIQVEGTGYLGTVQRRKLSPKFQESMESMMQMQEGDSNSNSATSNKLDFFGGRKWVDRGIRYLPESHDDDGDGSRDSASATASSITPEEQELLELEAVLQTESDEIDAAYSTRRLAGIVANSNDGSPLTLTPLEDRNPEN-------PSNNXXXVDVEHQNQILILD--------LEAVDRSCDLAEKGDEQALQVLATFVSSRQGSLPARRNALAFLGGTGDIGLTTEHMNVNSSDLVFMAIVSALQHEKSPIMRRTAGDALSDLGDPRAIPYAITAMEEDRSRLVQWRAARILGEFGDAPETLAVLKQASFSSDKYAFDIAFEIKDALRKVKARVVQAQERQQNGNGNDANIDANKAPRKGPMWKQIQE 562          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A7S3YPQ0_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YPQ0_9EUKA)

HSP 1 Score: 177 bits (449), Expect = 4.440e-46
Identity = 151/428 (35.28%), Postives = 210/428 (49.07%), Query Frame = 2
Query:  521 PEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLD-PLTLLMASGGEGGSAWKR-SEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDDXXXHGXXPAGATXXXXAAESAEEALAAAVDEVELAYHESRLRGAVHAALILLQKNAEAAEASAAAPAAAESTAEVRAATAVLQRSPAADKGEVVAAVDTLCALAGD-----GSKDALDALVGFAASGEGPVPARRAAVAYIGGAADAAGSAGL-----EAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGEL-ATREQDAVSLDEAREGEVEFEVAFEMSDAARKIRGRVA--ATGEEEVVTPAGV-GPVWKQIQE 1756
            P A+  LL+I GV SVY L  W+ + K+  A W  ++   ++ALGGA+ SL  P  LL+             S+M+GI +RLQVSNGIPIQ+EA    G   RRKLS RF E+++ F++  G++ AFF GR+WL +G+RY                            S  EAL    DE+E  Y   RL+             AE AE +                  ++      +  + +A+VDT+  +A         K A++ALV F   G G +  RR AVA +G   +            + +S  F  +    +RRTAGDAL+DLGDP AIP A+  L D SKLVRWRAA  +GE+      +A  L EA E E  FEVAFEM  +  ++R  +     G++      GV GP+WKQ+Q+
Sbjct:    8 PAAVQALLDIPGVASVYVLPTWVTVTKEKKAAWGEMLMPCIDALGGASPSLSLPTNLLLTEXXXXXXXXXXXSDMEGIQMRLQVSNGIPIQIEAKAMDGMSERRKLSGRFEESISTFLSIPGNDQAFFDGRKWLNKGLRYGHV-------------------------SLSEALDTLADEIETMYPPQRLKALA----------AEEAEYT------------------LVDLQALLNDLDDLASVDTVAEVAQKHEDPMAQKAAVNALVRFVQRGTGSMATRRHAVASLGIMGEXXXXXXXXXXXXDCLSLCFENEPAPFLRRTAGDALNDLGDPRAIPAALRALNDPSKLVRWRAAHLLGEVEGAGAAEADILSEAAETETAFEVAFEMKSSEMRVRKTLGDGVGGDDXXXXXXGVKGPMWKQLQQ 382          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A7S2XB48_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XB48_9EUKA)

HSP 1 Score: 156 bits (394), Expect = 4.400e-39
Identity = 142/368 (38.59%), Postives = 179/368 (48.64%), Query Frame = 2
Query:  716 SAWKRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDDXXXHGXXPAGATXXXXAAESAEEALAAAVDEVELAYHESRLRGAVHAALILLQKNAEAAEASAAAPAAAESTAEVRAATAVLQRSPAADKGEVVAAVDTLCALAG-----DGSKDALDALVGFAASGEGPVPARRAAVAYIGGAADAAGSAGL-----EAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGELATREQDAVS-LDEAREGEVEFEVAFEMSDAARKIRGRVAAT---------GEEEVVTPAG--VGPVWKQIQ 1753
            S+   SEM GI +RLQVSNGIPIQ+EA    GT  RRKLS RF E++  F++  G++  FF GR+WL +G+RY            H               S  EAL    DE+E  Y   RL             NA A+E S               A A LQ  P       +A+VDT+  +A         K A+DALV F   G G +  RR AVA +G   DA    G+     + +S  F  +    +RRTAGDAL+DLGDP AIP A+  L+D SKLVRWRAA  +GE+      A   L EA   E  FEVAFEM  +  +IR  +AA          GE+     AG   GP+WKQ+Q
Sbjct:    4 SSSSSSEMQGIQMRLQVSNGIPIQIEAKSTDGTSDRRKLSGRFEESIMAFLSTPGNDQLFFDGRKWLNKGLRY-----------GHA--------------SLSEALDTLADEIETMYPPERL-------------NALASEDS-------------NQALADLQ--PLLKDLHDLASVDTVAEIAQKHEDPSARKAAIDALVRFVQRGSGNMATRRHAVASLGIMGDAIEELGVAGAVVDCLSFCFENEPAPFLRRTAGDALNDLGDPRAIPAALRALKDPSKLVRWRAAHLIGEVEGAGTTAADILAEAETNETAFEVAFEMKSSEMRIRKTLAARDGGGAAGDGGEDGASGEAGGIKGPMWKQLQ 318          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A7S2XS20_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XS20_9STRA)

HSP 1 Score: 119 bits (299), Expect = 2.110e-27
Identity = 85/179 (47.49%), Postives = 107/179 (59.78%), Query Frame = 2
Query: 1250 VDTLCALAGDGSKDALDALVGFAASGEGPVPARRAAVAYIGGAA--DAAGSAG-----LEAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGELATREQDAVSLDEAR-EGEVEFEVAFEMSDAARKIRGRVAATGEEEVVTPAG--VGPVWKQIQE 1756
            VD  C LA  GS++AL  L  F AS EG + ARR A+AY+GG A  D+A +A       +A+++    + N  +RRTAGDALSDLGD  A+  AV  L DKSKLV+WRAAR +GEL         L +A    E  FEVAFE+ DA RK+R R+        V  +G   GP+WKQIQE
Sbjct:   11 VDRYCDLAELGSEEALTILATFVASHEGSMAARRNALAYLGGTAGTDSAANAVTTDLVFDAIASALENEKNPTMRRTAGDALSDLGDARAVTCAVSALGDKSKLVQWRAARILGELGDSMDVMAVLKQASFSSEYAFEVAFEIKDAMRKVRARLQNKESGVNVNGSGPATGPMWKQIQE 189          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A7S0H0H6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0H0H6_9EUKA)

HSP 1 Score: 119 bits (298), Expect = 4.050e-26
Identity = 76/191 (39.79%), Postives = 109/191 (57.07%), Query Frame = 2
Query:  374 RVSGIESTPNPSSFKFDLDQTL--YGPGSGATATRGITYSRAVVQQQHAGVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLDPLTLLMASGGEGGSAWKRSEMDG-IAIRLQVSNGIPIQVEA-CPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRY 934
            +V+ +ESTP+P +FK  LD+ L            RG T+ R          PEA+  +LE+ GV+SV    DW+ + K+  A W  ++   + ++GGA+ +L       A   E  S  K   ++G I +RLQVSNGIPIQVEA C   GT  R KLS RF EA+ +F+   G+E +FF+GR+WL +G+RY
Sbjct:   50 KVTLVESTPSPDAFKLSLDEVLPVRSEEEKEERKRGKTF-RGSQAFDLLVAPEAVKGVLELDGVESVLVSTDWITVTKRAKASWGDLLEKVITSIGGASPTLVLPDAPRAGNKE--SEGKEGGLEGGIKMRLQVSNGIPIQVEATCISDGTSKRYKLSGRFEEAIADFLKIPGNEQSFFQGRKWLNKGIRY 237          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: UPI001686EE8E (virulence factor n=1 Tax=Pseudanabaena sp. FACHB-2040 TaxID=2692859 RepID=UPI001686EE8E)

HSP 1 Score: 110 bits (275), Expect = 2.090e-22
Identity = 130/448 (29.02%), Postives = 193/448 (43.08%), Query Frame = 2
Query:  371 MRVSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQHAGVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLDPLTLLMAS----GGEGGSAWKRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDDXXXHGXXPAGATXXXXAAESAEEALAAAVDEVELAYHESRLRGAVHAALILLQKNAEAAEASAAAPAAAESTAEVRAATAVLQ------RSPAADKGEVVAAVDTLCALAGDGSKDALDALVGFAASGEGPVPARRAAVAYIGGAADAAGSAGLEAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGELATREQDAVS-LDEAREGEVEFEVAFEMSDAARKIRG 1681
            M++  IE+TP+P+  K +LD T+        + + +T  +          PE   RLL I+GV SV+ + D++ L +K ++ W  I+  A   +G  A + D   L   S      E   +   S +  + + +Q   GIP+QV      G   R  L  RF +A+   ++ +  +  +   R W P    Y A  G  D+                 A+   + + + +D  ELA  E+    A H      Q +A+  +           TA+ +A  A L       R  A  + EV            D  K  +                RR A A +G +      A +E +  V R D++A VRRTAGDALSDLG+P+A+P  +  L D SKLVRWRAAR + EL   +Q AV  L  A E E EF+V  EM  A  +I G
Sbjct:    1 MQLLSIETTPSPNCIKLNLDGTI--------SPKALTLQKG---SNSPDAPEVAQRLLAIEGVQSVFLIKDFITLTRKGNSDWQPILAKAANVIG-VADNADSKLLAQVSQPAQAAENNQSTPASNLGQLEVAVQTFRGIPVQVRVTAADGQQARVSLPERFSQALQRAISATAAD--YVAERRWEP----YQAPAGAPDEV----------------AQLVADEIDSLIDAEELAQIEA---AAAH------QSDAQPVD----------HTAQQQALVAQLSHLDWKHRLKALQQLEVTPETFPAVKALLDDEKSTI----------------RRWAAALLGASNL---EAAVEPLCRVVRQDSSAIVRRTAGDALSDLGNPSAMPTLIETLADASKLVRWRAARFLNELG--DQTAVEPLRRAAEQEAEFDVRVEMMAALERIEG 374          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A7S3BA81_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BA81_9EUKA)

HSP 1 Score: 101 bits (251), Expect = 6.450e-22
Identity = 59/115 (51.30%), Postives = 72/115 (62.61%), Query Frame = 2
Query: 1412 VSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGELATREQDAVSLDEAREGEVEFEVAFEMSDAARKIRGRVAATGEEEVVTPAGVGPVWKQIQE 1756
            V   F+ +  AG+RRTAGDALSDLG+  A P+AV  L D+S LVRWRAAR +GE+      A +L +A   E  FEVAFEM DAARK+  R A  G          GP+WKQIQ+
Sbjct:    1 VGVAFKSEKAAGLRRTAGDALSDLGNGRAAPLAVAALTDRSTLVRWRAARILGEVGEGGSVAAALKQASLEEAAFEVAFEMKDAARKVASRDAGEG-------GAKGPMWKQIQD 108          
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Match: A0A2K3CBC8_9CHRO (PBS lyase n=1 Tax=Euhalothece sp. KZN 001 TaxID=1884791 RepID=A0A2K3CBC8_9CHRO)

HSP 1 Score: 103 bits (258), Expect = 2.930e-20
Identity = 134/468 (28.63%), Postives = 202/468 (43.16%), Query Frame = 2
Query:  371 MRVSGIESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQHAGVPEAILRLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLDPLTLLMASGGEGGSAWKRS--EMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLSSRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDDXXXHGXXPAGATXXXXAAESAEEALAAAVDEVELAYHESRLRGAVHAALILLQKNAEAAEASAAAPAAAESTAEVRAATAVLQRSPAADKGEVVAAVDTLCALAGDGSKDALDALVGFAASGEGPVPARRAAVAYIGGAADAAGSAGLEAVSAVFRGDNNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGELATREQDAVSLDEAREGEVEFEVAFEMSDAARKIRGRVAATGEEEVVTPAGVGPVWKQIQERDSN 1768
            M++S +E+TPNP   K +LDQ        A A + +T+      ++    P  I +L+EI+GV   +   D++ L ++  A W+ I+  A + LG A    D     + S  E  S+ + S   +  + I +    GIP QV          R  +  RF EAM   V  +  E+ +   R W P G RY   E                      A    E +A+ +DE EL   E R +     A                      +T  ++ A  + Q + + +  E + A+  L     + + +   A+VG        +  RR A A +G + +   S  +E +S V   D++  VRRTAGDALSDLG+P  IP     L+D S LVRWRAAR + E    E    SL+ AR+ E  F+V  EMS A  +I       GEE  +      P+W ++ + DSN
Sbjct:    1 MKLSSLETTPNPHCMKLNLDQ--------AVAEKPMTFKSGESCEE---APSEIAQLIEIEGVKEAFISGDFVALIRQSQANWEPILSQAAKILGVA----DHADTELLSSSEFTSSQEESTKHLGEVEIAVLYFRGIPTQVRVIGEDAQK-RVAMPDRFNEAMQRVVEAT--EVNYVMERYWEPYGSRYGEPEA--------------------VANMVAEEVASLIDEEELQRIEKRAKAGDTRAT--------------------STTETLQTADLLHQLNHSENWKERLKAIQKL-----EMNTENFPAVVGALKDKRATI--RRWASALLGASEN---SKAVEPLSEVVLNDSSVIVRRTAGDALSDLGNPQGIPTMCHALQDSSPLVRWRAARFLYETGD-ESAIASLETARDQEQLFDVRLEMSAALNRIE-----RGEERQL------PMWMRLSQ-DSN 387          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig604.16673.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0B8_9PHAE2.170e-29289.36Nfu_N domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A1E7EQX7_9STRA1.010e-5135.32Nfu_N domain-containing protein n=1 Tax=Fragilario... [more]
A0A7S3VDY6_9STRA3.710e-4633.46Hypothetical protein n=2 Tax=Chaetoceros debilis T... [more]
A0A7S3YPQ0_9EUKA4.440e-4635.28Hypothetical protein n=1 Tax=Lotharella globosa Ta... [more]
A0A7S2XB48_9EUKA4.400e-3938.59Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A7S2XS20_9STRA2.110e-2747.49Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7S0H0H6_9EUKA4.050e-2639.79Hypothetical protein (Fragment) n=1 Tax=Amorphochl... [more]
UPI001686EE8E2.090e-2229.02virulence factor n=1 Tax=Pseudanabaena sp. FACHB-2... [more]
A0A7S3BA81_9EUKA6.450e-2251.30Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A2K3CBC8_9CHRO2.930e-2028.63PBS lyase n=1 Tax=Euhalothece sp. KZN 001 TaxID=18... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig604contigEcto-sp13_S_contig604:3937..7233 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeBacteria
Stop1
Start1
Seed ortholog score95.9
Seed ortholog evalue5.8e-17
Seed eggNOG ortholog102129.Lepto7375DRAFT_1486
Model size1897
Hectar predicted targeting categorychloroplast
Exons4
EggNOG free text desc.Scaffold protein Nfu/NifU N terminal
EggNOG OGs1G240@1117,COG1413@1,COG1413@2
Ec32 ortholog descriptionScaffold protein Nfu/NifU, N-terminal
Ec32 orthologEc-16_003800.1
Cds size1539
COG Functional cat.C
Best tax levelCyanobacteria
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig604.16673.1prot_Ecto-sp13_S_contig604.16673.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig604 4172..7110 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463841.438457-UTR-Ecto-sp13_S_contig604:3936..41711681463841.438457-UTR-Ecto-sp13_S_contig604:3936..4171Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig604 3937..4171 +
1681463841.4947698-UTR-Ecto-sp13_S_contig604:7110..72331681463841.4947698-UTR-Ecto-sp13_S_contig604:7110..7233Ectocarpus species13 EcNAP12_S_4_19mUTREcto-sp13_S_contig604 7111..7233 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463841.4487715-CDS-Ecto-sp13_S_contig604:4171..45641681463841.4487715-CDS-Ecto-sp13_S_contig604:4171..4564Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 4172..4564 +
1681463841.4599547-CDS-Ecto-sp13_S_contig604:5247..54061681463841.4599547-CDS-Ecto-sp13_S_contig604:5247..5406Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 5248..5406 +
1681463841.4709852-CDS-Ecto-sp13_S_contig604:5794..64831681463841.4709852-CDS-Ecto-sp13_S_contig604:5794..6483Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 5795..6483 +
1681463841.4821265-CDS-Ecto-sp13_S_contig604:6812..71101681463841.4821265-CDS-Ecto-sp13_S_contig604:6812..7110Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig604 6813..7110 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig604.16673.1

>prot_Ecto-sp13_S_contig604.16673.1 ID=prot_Ecto-sp13_S_contig604.16673.1|Name=mRNA_Ecto-sp13_S_contig604.16673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=513bp
MMQARLVALAATALPAGAFFVVSPPPATTTARRSAAAAWPMAPPMMRVSG
IESTPNPSSFKFDLDQTLYGPGSGATATRGITYSRAVVQQQHAGVPEAIL
RLLEIQGVDSVYALADWLCLNKKPSAKWDAIVPAAVEALGGAASSLDPLT
LLMASGGEGGSAWKRSEMDGIAIRLQVSNGIPIQVEACPPGGTPLRRKLS
SRFVEAMTEFVAGSGDEMAFFKGREWLPRGVRYPAEEGGDDDEDGHGEEP
AGATSKKTAAESAEEALAAAVDEVELAYHESRLRGAVHAALILLQKNAEA
AEASAAAPAAAESTAEVRAATAVLQRSPAADKGEVVAAVDTLCALAGDGS
KDALDALVGFAASGEGPVPARRAAVAYIGGAADAAGSAGLEAVSAVFRGD
NNAGVRRTAGDALSDLGDPAAIPIAVGGLRDKSKLVRWRAARAVGELATR
EQDAVSLDEAREGEVEFEVAFEMSDAARKIRGRVAATGEEEVVTPAGVGP
VWKQIQERDSNK*
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mRNA from alignment at Ecto-sp13_S_contig604:3937..7233+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig604.16673.1 ID=mRNA_Ecto-sp13_S_contig604.16673.1|Name=mRNA_Ecto-sp13_S_contig604.16673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=3297bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:3937..7233+ (Ectocarpus species13 EcNAP12_S_4_19m)
CGAATAAAGGCGTTTTGCATGCATCCATTTTCGAGAATTTCAGCAGAGAG ACAGCAGCAGCCACAGCAGACAGCCACGTAGCAGTAGGAGAAAGCAGAAT CCCCCCCCCAAAAGTAGCAGCACTAGGCAGGAGTTTTAGTTCGCGTCTTC CGCACACAGCAGCATTGCGCTGCTCAGTTCTGCTGCTGTGGCCACAGCGC ATACCACGAACACGGGGAGAGCGCGCAGCAAGAACATGATGCAAGCTCGT CTTGTTGCCCTGGCAGCGACGGCTCTACCCGCCGGGGCCTTCTTTGTCGT GTCGCCACCGCCAGCAACAACGACCGCCAGAAGATCAGCAGCAGCGGCGT GGCCAATGGCGCCACCAATGATGCGCGTCTCCGGCATAGAGAGTACGCCA AACCCAAGCTCGTTCAAGTTTGACCTCGATCAGACCCTCTACGGTCCCGG CTCGGGCGCCACGGCAACCAGAGGCATCACCTACTCTCGCGCGGTGGTGC AGCAGCAGCACGCAGGGGTTCCCGAGGCTATCTTAAGACTCCTCGAGATC CAAGGCGTGGATTCCGTGTACGCCTTGGCGGACTGGCTGTGCCTCAACAA GAAGCCCTCCGCCAAGTGGGATGCGATCGTGAGTATGCACATGCATATTG GAGAGCGTGAATGTGACAGTCCCGCGAACGAATGAAAAATGAAACGTCAA GTACATGGCATAGTCTATGCAAACAAGTATGCTTGCAATGGCACCGGACT TGGCCTTTGTGTGGGCTTGCTGTTCGACGAGGATTCTTTCGAAGAACGTG GAGATTGCTGCACGCGGCAATAACATTGTGTCATCGTCTGATAGAAAAAC CACACGCCGAGTTCTGCAGATGGTGCACGGACAAACCGACACGTGGGCAC ACGCTTCTCTTGTGTGCAAGCTTACAGATACACTGCTGTTGGGTGGTGAT CGAGCGGATAACGGCAACCGCTGACTGGGGGTGGAGGATCTAACACGGAG GCTGTGGCGTGTGCGCGTCGTGACCAAGGGCACTTTGTCAGGCCGTCATG TTACACAACACCGGGACGTGGCATTGCCTCTCTCTCTCCCCCTTCCTCCC TCTCCCCCCCCGCCGGAGAGCGAAATATAGTCACTGAAGCGATGGAACAT AAAACAAGATTAATCCCATGCGTTCCTAGGTATTGCCTAGCAGTGATGCG TGATCGTGTACCCAAGAGACGAGTTCTAGGACGCAGTATTTGGTCGGAAG GTGAACAATTTTACGCCATGACGAAAATGTGGCGACGATGACAGCGACGA CTTGTGGGCAGGTTCCCGCGGCGGTGGAGGCCTTGGGCGGGGCGGCCTCG TCCCTAGATCCCCTGACGCTACTCATGGCGTCTGGGGGGGAGGGCGGGTC GGCTTGGAAAAGGTCGGAGATGGACGGAATCGCCATTCGCCTGCAGGTGT CCAACGGCATCCCGATCCAGGTGCGGCGGTACGTGAAAATTGCGACGTTG CCGGACAGCACGAATAGACGTGGGTGTGCACCTGTTCTTTTGGGCAGCGT CCGCGTTTGGGGGCCCTGTATGCATGCTACTTGTGACTTTCCTGCGTACT TGCCCAAAAAACGATTCATCCCAATTCGAATGGTTCCAGTATTCATCAGT TTGTCGTGCTTTCGCCTTCAACTAACCTGCCCTTGAGGGACAACACAGAT TTACGGCGCGTGTTTGCCTCTTTGGGCAGCGTCCGCGACAGAGGGGCGCA TGTTCCCGCATTGCCTCTGCCTCTTGACGGTAGAGCGTTAATAGTAACTT GCTCTCGTTCCATCTTTCGCCGACCACGTCTCTCGCTCTCAACCTAATAA CCCCGCAGGTGGAGGCCTGCCCCCCGGGCGGGACCCCTCTCCGCCGCAAG CTGTCCTCTCGCTTCGTCGAAGCCATGACGGAGTTCGTCGCCGGCTCCGG CGACGAGATGGCCTTCTTCAAGGGTCGCGAGTGGCTCCCCCGCGGCGTAC GGTATCCCGCGGAAGAGGGAGGGGATGATGATGAAGATGGTCACGGCGAG GAGCCGGCCGGGGCGACGAGTAAGAAGACGGCTGCCGAGTCCGCCGAGGA AGCGCTCGCTGCGGCGGTCGACGAGGTCGAGCTGGCCTACCACGAGTCCA GGCTACGCGGGGCGGTGCACGCGGCCCTGATCCTCCTGCAGAAGAATGCC GAGGCTGCTGAGGCTTCTGCTGCTGCCCCTGCTGCTGCCGAGAGCACCGC GGAGGTGAGGGCGGCGACCGCGGTGCTGCAGCGATCCCCGGCCGCCGACA AGGGCGAGGTTGTCGCGGCCGTCGACACCCTCTGTGCCCTGGCGGGGGAT GGTTCCAAGGATGCCCTCGACGCGCTCGTCGGCTTCGCCGCATCCGGGGA AGGCCCGGTCCCCGCCCGACGCGCGGCGGTGGCGTACATCGGGGGCGCGG CGGACGCCGCGGGGTCTGCGGGCTTGGAGGCCGTGTCGGCGGTGTTTCGC GGGGACAATAACGCCGGGGTTCGGCGCACCGCGGGGGATGCGCTGAGGTT CGGCCGAGGGAGACGGTCTAGTGTGTGCCCTGTGTGAAGGCGAAGGTCTT TTTGTGTGTCGTGATATGCCCCACCCATGCCTCTCTCTAGGCCGACCGCA GCTCGCGCTTGCAGGCCAGTGGGGCATTCCCGGAGTATTTTTTTTTGTGC CCCGGCCTCCGCTGTAAGGGGCGTGGGGTTAAATCGGCCACTGGCGGACT TGATGCTGACCTCCTGCCCCCGGCCACCCTCTCGAGGACGCGTGGTCAAA CAATCAAGGGATGCAAAACATGTATACACCCCTCCCCTATTTGTGTGTGT GTTTTCTTACCTCTTGATAAAACCAGTGACCTTGGAGACCCTGCCGCGAT TCCAATCGCCGTCGGCGGCCTCCGCGACAAGAGCAAGCTCGTCCGCTGGA GGGCCGCGCGGGCCGTCGGCGAGCTGGCCACCCGGGAGCAGGACGCGGTG TCTCTCGACGAGGCCCGTGAGGGGGAGGTCGAGTTCGAGGTGGCGTTCGA AATGTCAGACGCCGCGCGCAAGATCAGGGGGAGGGTTGCCGCCACCGGGG AAGAGGAGGTGGTCACCCCCGCCGGGGTCGGCCCCGTTTGGAAGCAGATC CAAGAGAGGGATAGCAACAAGTAGGCGGGAGGGGTACTTCATTTGTCCTT CGGGGGATTCAGCAATCATAAAATGTTTGAGAGAAGGAGAGTCTGGCAAT CACGGCATGCGGGAGGCTCTTTGGCCTGCCGACTAAGCGGAAGGGGG
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig604:3937..7233+

>mRNA_Ecto-sp13_S_contig604.16673.1 ID=mRNA_Ecto-sp13_S_contig604.16673.1|Name=mRNA_Ecto-sp13_S_contig604.16673.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1539bp|location=Sequence derived from alignment at Ecto-sp13_S_contig604:3937..7233+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGATGCAAGCTCGTCTTGTTGCCCTGGCAGCGACGGCTCTACCCGCCGG
GGCCTTCTTTGTCGTGTCGCCACCGCCAGCAACAACGACCGCCAGAAGAT
CAGCAGCAGCGGCGTGGCCAATGGCGCCACCAATGATGCGCGTCTCCGGC
ATAGAGAGTACGCCAAACCCAAGCTCGTTCAAGTTTGACCTCGATCAGAC
CCTCTACGGTCCCGGCTCGGGCGCCACGGCAACCAGAGGCATCACCTACT
CTCGCGCGGTGGTGCAGCAGCAGCACGCAGGGGTTCCCGAGGCTATCTTA
AGACTCCTCGAGATCCAAGGCGTGGATTCCGTGTACGCCTTGGCGGACTG
GCTGTGCCTCAACAAGAAGCCCTCCGCCAAGTGGGATGCGATCGTTCCCG
CGGCGGTGGAGGCCTTGGGCGGGGCGGCCTCGTCCCTAGATCCCCTGACG
CTACTCATGGCGTCTGGGGGGGAGGGCGGGTCGGCTTGGAAAAGGTCGGA
GATGGACGGAATCGCCATTCGCCTGCAGGTGTCCAACGGCATCCCGATCC
AGGTGGAGGCCTGCCCCCCGGGCGGGACCCCTCTCCGCCGCAAGCTGTCC
TCTCGCTTCGTCGAAGCCATGACGGAGTTCGTCGCCGGCTCCGGCGACGA
GATGGCCTTCTTCAAGGGTCGCGAGTGGCTCCCCCGCGGCGTACGGTATC
CCGCGGAAGAGGGAGGGGATGATGATGAAGATGGTCACGGCGAGGAGCCG
GCCGGGGCGACGAGTAAGAAGACGGCTGCCGAGTCCGCCGAGGAAGCGCT
CGCTGCGGCGGTCGACGAGGTCGAGCTGGCCTACCACGAGTCCAGGCTAC
GCGGGGCGGTGCACGCGGCCCTGATCCTCCTGCAGAAGAATGCCGAGGCT
GCTGAGGCTTCTGCTGCTGCCCCTGCTGCTGCCGAGAGCACCGCGGAGGT
GAGGGCGGCGACCGCGGTGCTGCAGCGATCCCCGGCCGCCGACAAGGGCG
AGGTTGTCGCGGCCGTCGACACCCTCTGTGCCCTGGCGGGGGATGGTTCC
AAGGATGCCCTCGACGCGCTCGTCGGCTTCGCCGCATCCGGGGAAGGCCC
GGTCCCCGCCCGACGCGCGGCGGTGGCGTACATCGGGGGCGCGGCGGACG
CCGCGGGGTCTGCGGGCTTGGAGGCCGTGTCGGCGGTGTTTCGCGGGGAC
AATAACGCCGGGGTTCGGCGCACCGCGGGGGATGCGCTGAGTGACCTTGG
AGACCCTGCCGCGATTCCAATCGCCGTCGGCGGCCTCCGCGACAAGAGCA
AGCTCGTCCGCTGGAGGGCCGCGCGGGCCGTCGGCGAGCTGGCCACCCGG
GAGCAGGACGCGGTGTCTCTCGACGAGGCCCGTGAGGGGGAGGTCGAGTT
CGAGGTGGCGTTCGAAATGTCAGACGCCGCGCGCAAGATCAGGGGGAGGG
TTGCCGCCACCGGGGAAGAGGAGGTGGTCACCCCCGCCGGGGTCGGCCCC
GTTTGGAAGCAGATCCAAGAGAGGGATAGCAACAAGTAG
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