mRNA_Ecto-sp13_S_contig6037.16666.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig6037.16666.1
Unique NamemRNA_Ecto-sp13_S_contig6037.16666.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI)

HSP 1 Score: 282 bits (722), Expect = 6.130e-84
Identity = 190/233 (81.55%), Postives = 193/233 (82.83%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDG+     XXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXX                  VGEACLESSGEPV                 XXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQ+RCPRGTFGEETNLVNATMCSTC
Sbjct: 2447 TGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGNXXXXXXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXAGTAEATLQCS-------VGEACLESSGEPVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQHRCPRGTFGEETNLVNATMCSTC 2672          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: A0A6G0S9T2_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0S9T2_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.280e-25
Identity = 91/233 (39.06%), Postives = 122/233 (52.36%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GGPC+ G  CPEGS     C  G+YC+  +      C+ G+YCVQG+ T +P  + +  G ++GDV                CP GTYS +T N +++ CLPC+PGF+C  ++   P +                            G  C E S EP  C  GT+ +E G   C XXXXXXXXXXXXXXXXXXXXX YCP  T  AT+Y C  G+FG++  L ++  C+ C
Sbjct: 1262 TGGPCLPGTNCPEGSAVPIVCDAGAYCSSTNTDAALPCHEGFYCVQGSYTATPTGQNNSLG-IIGDVCTSGHYCPQGTSNPIPCPPGTYSETTQNVDASYCLPCSPGFVCNTSALVTPFDKCPGGYVCAGGASTATQLCPK-------GFECPEGSFEPRACPAGTFADEEGLARCXXXXXXXXXXXXXXXXXXXXXXYYCPLQTPSATKYPCLAGSFGDQRALASSKECAPC 1486          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: A0A6G0M0R9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0M0R9_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.280e-25
Identity = 91/233 (39.06%), Postives = 122/233 (52.36%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GGPC+ G  CPEGS     C  G+YC+  +      C+ G+YCVQG+ T +P  + +  G ++GDV                CP GTYS +T N +++ CLPC+PGF+C  ++   P +                            G  C E S EP  C  GT+ +E G   C XXXXXXXXXXXXXXXXXXXXX YCP  T  AT+Y C  G+FG++  L ++  C+ C
Sbjct: 2692 TGGPCLPGTNCPEGSAVPIVCDAGAYCSSTNTDAALPCHEGFYCVQGSYTATPTGQNNSLG-IIGDVCTSGHYCPQGTSNPIPCPPGTYSETTQNVDASYCLPCSPGFVCNTSALVTPFDKCPGGYVCAGGASTATQLCPK-------GFECPEGSFEPRACPAGTFADEEGLARCXXXXXXXXXXXXXXXXXXXXXXYYCPLQTPSATKYPCLAGSFGDQRALASSKECAPC 2916          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: A0A6A3NX77_9STRA (Ephrin_rec_like domain-containing protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NX77_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.740e-25
Identity = 91/233 (39.06%), Postives = 121/233 (51.93%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GGPC+ G  CPEGS     C  G+YC+  +      C+ G+YCVQG+ T +P  + +  G ++GDV                CP GTYS +T N ++  CLPC+PGF+C  ++   P +                            G  C E S EP  C  GT+ +E G   C XXXXXXXXXXXXXXXXXXXXX YCP  T  AT+Y C  G+FG++  L ++  C+ C
Sbjct: 1954 TGGPCLPGTNCPEGSAVPIVCDAGAYCSSTNTDAALPCHEGFYCVQGSYTATPTGQNNSLG-IIGDVCTSGHYCPQGTSNPIPCPPGTYSETTQNVDANYCLPCSPGFVCNTSALVTPFDKCPGGYVCAGGASTATQLCPK-------GFECPEGSFEPRACPAGTFADEEGLARCXXXXXXXXXXXXXXXXXXXXXXYYCPLQTPSATKYPCLAGSFGDQRALASSKECAPC 2178          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: A0A6A3PAM2_9STRA (Ephrin_rec_like domain-containing protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3PAM2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.740e-25
Identity = 91/233 (39.06%), Postives = 121/233 (51.93%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GGPC+ G  CPEGS     C  G+YC+  +      C+ G+YCVQG+ T +P  + +  G ++GDV                CP GTYS +T N ++  CLPC+PGF+C  ++   P +                            G  C E S EP  C  GT+ +E G   C XXXXXXXXXXXXXXXXXXXXX YCP  T  AT+Y C  G+FG++  L ++  C+ C
Sbjct: 2026 TGGPCLPGTNCPEGSAVPIVCDAGAYCSSTNTDAALPCHEGFYCVQGSYTATPTGQNNSLG-IIGDVCTSGHYCPQGTSNPIPCPPGTYSETTQNVDANYCLPCSPGFVCNTSALVTPFDKCPGGYVCAGGASTATQLCPK-------GFECPEGSFEPRACPAGTFADEEGLARCXXXXXXXXXXXXXXXXXXXXXXYYCPLQTPSATKYPCLAGSFGDQRALASSKECAPC 2250          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: UPI0014257123 (uncharacterized protein LOC117111255 n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI0014257123)

HSP 1 Score: 112 bits (280), Expect = 1.100e-24
Identity = 82/240 (34.17%), Postives = 102/240 (42.50%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCN-DASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAG------TMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +G  C AG YCPEGS +  ACPGG YC  D    I+G+C AGYYC   A  P+PE     DG+  GD                 C SGTY  ST N +   CL C PG+ C     ++PT+                     XXXXX    A +E    P+ C  GTYQ+++GQ  C                      SYCP G      T +A ++ CPRGTF   T+      C  C
Sbjct: 2619 AGDQCSAGTYCPEGSTFPTACPGGHYCAVDRLANISGECDAGYYCYLMAVVPNPE-----DGNATGDHCPMGAFCPAASDSPTLCQSGTYLNSTHNDDELDCLLCVPGWYCAGGGNALPTDKCSRGYYCPAAQDEATPAEYNXXXXXXXXXASIE----PLRCESGTYQDQVGQWAC-KDCPAGYYCDNVIEPVVLYNDSYCPTGHYCPQDTKYANEFPCPRGTFNNLTHRTEEYDCQPC 2848          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: UPI001459053E (LOW QUALITY PROTEIN: uncharacterized protein LOC117334493 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001459053E)

HSP 1 Score: 107 bits (268), Expect = 4.370e-23
Identity = 84/245 (34.29%), Postives = 107/245 (43.67%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVIT--GDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXX----------SYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GG C  G++CP GS     C  G YC D  G+ T  G C AGY    GA    P+N+        G  XXXXXXXXXXX   + CPSGT+S + GNT S+ C PCT G+ C N+  S PT                             G  C   S     CA GTYQNE GQ +C                                ++CP GT +AT+Y+CP GT+   + L ++  C+ C
Sbjct: 3297 TGGQCQPGEFCPTGSSQPTPCTTGKYC-DVVGLSTEAGPCRAGYXXTLGANREDPQNDT------TGXXXXXXXXXXXXXGTPEPCPSGTFSNTLGNTASSDCQPCTLGWYCDNSGLSAPTGQCSAGYYCPAGQNVSSPADYICTP----GHFCEVGSAMLTSCASGTYQNEFGQSVCKECPEGYFCDGSTQNDTFCSTGVQNPAICEPGNFCPNGTKYATEYKCPNGTYSNSSGLKSSAECTPC 3530          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: UPI0009E3911A (uncharacterized protein LOC110042058 isoform X3 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E3911A)

HSP 1 Score: 107 bits (267), Expect = 5.910e-23
Identity = 96/238 (40.34%), Postives = 115/238 (48.32%), Query Frame = 1
Query:    4 GGPCVAGQYCPEGSPYWRACPGGSYCNDAS-GVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXX-----SYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            G  C    YCP GS   + C  G YC+         DC AGYYC  GAK  +P + V       G++              + CP GT+  STGN N T C+ CTPG+ C  +   VPT+ XXXXXXXXXXXXXXXXXXXXXXXXX       E S  PVPC  G YQNE  Q  C                            YCP GT +A +++CP GTF   T + + + C TC
Sbjct: 3949 GARCPVSHYCPNGSALPQVCDPGKYCSRPELSEPEFDCEAGYYCTSGAKEANPTDGV------TGNICPNGTFCPRGSDAPENCPVGTFLNSTGNRNVTDCIECTPGWYCGGSGLPVPTDLXXXXXXXXXXXXXXXXXXXXXXXXX------XEGSPNPVPCDAGQYQNETAQATCRICPPGFYCNDTYGPVISYGQFLCIEGHYCPEGTRYAEEFKCPPGTFNNRTGMDDKSDCRTC 4174          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: A0A5D6XKV9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKV9_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.440e-22
Identity = 67/233 (28.76%), Postives = 95/233 (40.77%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GGPC+ G  CPEGS     C  G YC+  +      C      VQG+ T +P  + +  G ++GDV                CP GTYSG+T N +   C PC PG++CP++ T++P+                             G  C E S     C+ G++ +E+G   C                       YCP  T  AT Y CP GT+   T+L +A  C+ C
Sbjct: 1821 TGGPCLPGTNCPEGSAVPIVCDAGYYCSSTNTDKALPCXXXXXXVQGSYTANPTGQNNSLG-IIGDVCTSGHYCPKGSSNPIPCPPGTYSGNTQNVDPEDCFPCPPGYLCPSSGTTLPSMKCPSGFICIGGEREASQQCPK-------GSECPEGSSYARACSAGSFSDEVGLAQCKLCPERHFCAKETVRPQECPPGFYCPLRTPSATSYPCPPGTYSNWTSLASAAECALC 2045          
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Match: D0MZ33_PHYIT (Ephrin_rec_like domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MZ33_PHYIT)

HSP 1 Score: 104 bits (260), Expect = 5.010e-22
Identity = 81/233 (34.76%), Postives = 108/233 (46.35%), Query Frame = 1
Query:    1 SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKTPSPENEVDEDGHVVGDVXXXXXXXXXXXXXXQACPSGTYSGSTGNTNSTACLPCTPGFICPNASTSVPTEXXXXXXXXXXXXXXXXXXXXXXXXXXGVGEACLESSGEPVPCAPGTYQNELGQELCLXXXXXXXXXXXXXXXXXXXXXSYCPAGTMWATQYRCPRGTFGEETNLVNATMCSTC 699
            +GGPC+ G  CPEGS     C  G+YC+  +      C  G+YCVQG+ T +P  + +  G ++GDV                C  G+YS +T N N++ CL C+PGFIC  +    P E                            G  C E S EP  C  GT+ +E G   C         XXXXXXXXXXXXX YCP  T    +Y C  G+FG++  L ++  C+ C
Sbjct: 1491 TGGPCLPGTNCPEGSAVPIVCDAGAYCSSTNTDAALPCKEGFYCVQGSYTATPTGQNNSLG-MIGDVCTRGHYCPQGTSNPIPCLPGSYSETTQNANASYCLSCSPGFICSTSGIVTPFEKCPAGFICPGGESSATQPCPK-------GSECPEGSFEPRSCPAGTFADEKGLASCKLCPERYYCXXXXXXXXXXXXXYYCPLQTPSPRKYPCLAGSFGDQIALASSKECAQC 1715          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6037.16666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LR26_ECTSI6.130e-8481.55Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0S9T2_9STRA1.280e-2539.06Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6G0M0R9_9STRA1.280e-2539.06Uncharacterized protein n=2 Tax=Phytophthora fraga... [more]
A0A6A3NX77_9STRA1.740e-2539.06Ephrin_rec_like domain-containing protein n=7 Tax=... [more]
A0A6A3PAM2_9STRA1.740e-2539.06Ephrin_rec_like domain-containing protein n=6 Tax=... [more]
UPI00142571231.100e-2434.17uncharacterized protein LOC117111255 n=1 Tax=Annei... [more]
UPI001459053E4.370e-2334.29LOW QUALITY PROTEIN: uncharacterized protein LOC11... [more]
UPI0009E3911A5.910e-2340.34uncharacterized protein LOC110042058 isoform X3 n=... [more]
A0A5D6XKV9_9STRA1.440e-2228.76Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
D0MZ33_PHYIT5.010e-2234.76Ephrin_rec_like domain-containing protein n=1 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6037contigEcto-sp13_S_contig6037:3332..5110 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score284.3
Seed ortholog evalue5.3e-74
Seed eggNOG ortholog2880.D8LR26
Model size699
KEGG koko:K16726,ko:K17751
KEGG Pathwayko04260,ko04261,ko05416,map04260,map04261,map05416
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.translation initiation factor activity
EggNOG OGsCOG5022@1,KOG0161@2759,KOG1217@1,KOG1217@2759,KOG3529@1,KOG3529@2759
Cds size699
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463840.899712-CDS-Ecto-sp13_S_contig6037:3331..34851681463840.899712-CDS-Ecto-sp13_S_contig6037:3331..3485Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6037 3332..3485 -
1681463840.912271-CDS-Ecto-sp13_S_contig6037:3657..37901681463840.912271-CDS-Ecto-sp13_S_contig6037:3657..3790Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6037 3658..3790 -
1681463840.9236326-CDS-Ecto-sp13_S_contig6037:4247..45211681463840.9236326-CDS-Ecto-sp13_S_contig6037:4247..4521Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6037 4248..4521 -
1681463840.9337604-CDS-Ecto-sp13_S_contig6037:4972..51101681463840.9337604-CDS-Ecto-sp13_S_contig6037:4972..5110Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig6037 4973..5110 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6037.16666.1prot_Ecto-sp13_S_contig6037.16666.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig6037 3332..5110 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig6037.16666.1

>prot_Ecto-sp13_S_contig6037.16666.1 ID=prot_Ecto-sp13_S_contig6037.16666.1|Name=mRNA_Ecto-sp13_S_contig6037.16666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=233bp
SGGPCVAGQYCPEGSPYWRACPGGSYCNDASGVITGDCYAGYYCVQGAKT
PSPENEVDEDGHVVGDVCPAGYYCPVGSETPQACPSGTYSGSTGNTNSTA
CLPCTPGFICPNASTSVPTEPCPAGFYCPAGTKLVTVSTAEATLQCGVGE
ACLESSGEPVPCAPGTYQNELGQELCLPCPEGYFCLQGTGTPTDCPLGSY
CPAGTMWATQYRCPRGTFGEETNLVNATMCSTC
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mRNA from alignment at Ecto-sp13_S_contig6037:3332..5110-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig6037.16666.1 ID=mRNA_Ecto-sp13_S_contig6037.16666.1|Name=mRNA_Ecto-sp13_S_contig6037.16666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1779bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6037:3332..5110- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGGTGGCCCGTGCGTTGCGGGCCAGTACTGTCCCGAGGGTTCCCCGTA CTGGCGGGCCTGCCCCGGCGGATCCTACTGCAACGACGCCAGCGGAGTGA TCACCGGCGATTGCTACGCAGGGTACTACTGTGTACAGGTGTGCGAACCA TCGAGGCATTTGCACAACGTTGGGAAAGCACCACTGGTGGTTTATGCGAA CTTCGAACTATCAATTTATCATACGTTTCCTTGCCTTCGGGCTTTCGCTC CATGTTGTGCGACAGTCCTAGCCACGCCAACCGTGTGGAGAGGTGTTCGT ATTGTTTGTCCACCGCTCAACAGCAACGATGAAAACACTCTACCGCGGTG TGGACGACCGCTCGCATCATGACCTGAAAATACTCTTGGGCATAATGCGA GACTCGGCGCGTTATTTCAAAACCAGGAGTTTACCCCCAACCGCTTGCAC AGATAAACAGCTCGCTTACCAACCAGGACCTCGGCCGAAAAATATCTACG TCTTATGCTTAATAACAACGCGTTTGAGAATAACGCAGGTGCTTCTCCAA TCCCTCTCTCACAGCCGTTTCAATATATTCCGCTGACAGGGCGCAAAGAC ACCGTCTCCAGAGAACGAGGTCGACGAGGACGGCCACGTGGTAGGGGACG TCTGTCCGGCGGGGTACTACTGCCCCGTGGGATCCGAGACCCCGCAAGCC TGCCCCTCCGGGACCTACTCCGGTTCCACGGGAAATACCAACTCCACCGC GTGTCTGCCTTGCACCCCGGGATTCATCTGCCCCAACGCGAGCACCTCGG TTCCCACGGAGCCATGCCCAGCGGGCTTCTACTGCCCCGCAGGTACAAAA TTAGTTACCGTCAGTCTGGCTGAGTAGTGATGTTCGACTGTGTAGGTTTT CCTGTACCCGCCGACAAGTACCAAGGTGGATTTCGGGTTTGCATGGCCAC CAACAGACGGGAAATTTTTCCAGGGATCGGAAGGGAGGTATGTAAAAAAG TGGGTTTCATACGGAGGTCAACAGTGAATGACTTGCTTGTTTCCAGCTTC GCGGGGTTTGATTCACGCTTCTAGCAGCCATGTAGGCTTCCGCCCCTGCG GAGATTGTTCTCGTTTCGAGTGTCCGTAGTTGACAAGCAAACTTTGGCTT GGCTTGTGGAATACAAAAATCCCAATGACAGTGACAAAGCAACCCCACAA GCTGACGGTGTACGCATGCCTCCAGCGGTGTCTCTGCCTTTTCGAAAAAT ACGTTTACTAGCCCCTCCACGGTTGACGACCAAAACTGCGTATTGCCTCT TTCCCACGTACAATTCAAAGGTACCGCCGAGGCAACTCTCCAGTGCGGCG TCGGGGAGGCGTGTTTGGAATCTTCCGGGGAGCCGGTACCATGCGCCCCG GGAACCTACCAGAACGAGCTCGGTCAGGAGCTCTGCCTGCCGTGTCCTGA GGGGTGAGTGAGAGGGGGCAACGAACGGGGAATAGGAATGTCTGGGCGTG GCGTCGTATCGGCGTTGGAAGTTGGCCTTGATAACGGAACTGAAGTGCGG GAGGTGGTTCTTTGTCAGGCTTGCACGCAATTCTCTCATCTCGAGTTGTC TCAAATGAGTGGTGGATTTGGGCAGGTACTTCTGCCTCCAAGGGACGGGG ACGCCGACCGACTGCCCTCTGGGTAGCTACTGCCCGGCGGGAACAATGTG GGCAACTCAGTACCGGTGCCCGAGAGGAACGTTCGGGGAAGAAACCAACC TCGTCAACGCCACCATGTGCAGCACATGC
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6037:3332..5110-

>mRNA_Ecto-sp13_S_contig6037.16666.1 ID=mRNA_Ecto-sp13_S_contig6037.16666.1|Name=mRNA_Ecto-sp13_S_contig6037.16666.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=699bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6037:3332..5110- (Ectocarpus species13 EcNAP12_S_4_19m)
TCAGGTGGCCCGTGCGTTGCGGGCCAGTACTGTCCCGAGGGTTCCCCGTA
CTGGCGGGCCTGCCCCGGCGGATCCTACTGCAACGACGCCAGCGGAGTGA
TCACCGGCGATTGCTACGCAGGGTACTACTGTGTACAGGGCGCAAAGACA
CCGTCTCCAGAGAACGAGGTCGACGAGGACGGCCACGTGGTAGGGGACGT
CTGTCCGGCGGGGTACTACTGCCCCGTGGGATCCGAGACCCCGCAAGCCT
GCCCCTCCGGGACCTACTCCGGTTCCACGGGAAATACCAACTCCACCGCG
TGTCTGCCTTGCACCCCGGGATTCATCTGCCCCAACGCGAGCACCTCGGT
TCCCACGGAGCCATGCCCAGCGGGCTTCTACTGCCCCGCAGGTACAAAAT
TAGTTACCGTCAGTACCGCCGAGGCAACTCTCCAGTGCGGCGTCGGGGAG
GCGTGTTTGGAATCTTCCGGGGAGCCGGTACCATGCGCCCCGGGAACCTA
CCAGAACGAGCTCGGTCAGGAGCTCTGCCTGCCGTGTCCTGAGGGGTACT
TCTGCCTCCAAGGGACGGGGACGCCGACCGACTGCCCTCTGGGTAGCTAC
TGCCCGGCGGGAACAATGTGGGCAACTCAGTACCGGTGCCCGAGAGGAAC
GTTCGGGGAAGAAACCAACCTCGTCAACGCCACCATGTGCAGCACATGC
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