mRNA_Ecto-sp13_S_contig6036.16664.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: D8LT07_ECTSI (Beta-1,3-n-acetylglucosaminyltransferase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT07_ECTSI) HSP 1 Score: 685 bits (1768), Expect = 6.730e-242 Identity = 413/492 (83.94%), Postives = 423/492 (85.98%), Query Frame = 1
Query: 1 MDPNRRTSAVHLRDSSDAAAAGATAAAPTASEAGEETLSIPLLPSSYSAATPAGSLPPRRHKQRGSXXXXXXXETALEAPLLPSGGAQKRSGGSGGARPLASARTAPADASRGSRHYRARSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLLWAFWRRRRALATSLFGTHSENSGLSRLARHHPWGRRLATAGAVLLAAAFWFAVIVAVAGPATRGRADGDNNEGEDNATGSGRDGDKGAADVSRPYYRQIPGDFAVGPSQADPWMVRDIEIATAEWGLEGGGGGDASSEDDGHGGDAAETYSTEGGEGEAAGSLGLGRRSGKRGREWDGRVNSVVMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGNNPEPREFTVSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
MDPNRRTSAVHLRDSSDAAAAGATAA P LSI LLPSSYSAATPA SLPPRRHK+ GS ETALEAPLLPSGGAQKR GGSGGARPLASA TAPADA RGSRHYRA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX FW RALA SL G SE GLSRLARH P GRRLATAGAVLLAAAFWF+VIVAVAGPAT GRA GDNN+G N G GRDGDKGAADVSR YYR+IPG+FAVGPS ADPWMVRDIEIATA+WGLEGGGGGDASSEDDG EGEAAGSLGLGRRSGKRG EWDGRV+SVVMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEG NPEPREFTVSVVFV+SKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDF+FLLKADDDSFVCLTRIASMLHDLDPEI+GKVY
Sbjct: 1 MDPNRRTSAVHLRDSSDAAAAGATAAVPXXXXXXXXALSIHLLPSSYSAATPARSLPPRRHKRCGSSSAAAARETALEAPLLPSGGAQKRPGGSGGARPLASAPTAPADAPRGSRHYRASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFWXXXRALAASLLGARSEIGGLSRLARH-PLGRRLATAGAVLLAAAFWFSVIVAVAGPATGGRAAGDNNKGXXNPNGGGRDGDKGAADVSRSYYRRIPGEFAVGPSLADPWMVRDIEIATADWGLEGGGGGDASSEDDGRXXXXXXXXXXXXXEGEAAGSLGLGRRSGKRGTEWDGRVSSVVMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGKNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFDFLLKADDDSFVCLTRIASMLHDLDPEIRGKVY 491
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: A0A6H5KXB2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXB2_9PHAE) HSP 1 Score: 474 bits (1220), Expect = 1.330e-162 Identity = 311/371 (83.83%), Postives = 321/371 (86.52%), Query Frame = 1
Query: 1 MDPNRRTSAVHLRDSSDAAAAGATAAAPTASEAGEETLSIPLLPSSYSAATPAGSLPPRRHKQRGSXXXXXXXETALEAPLLPSGGAQKRSGGSGGARPLASARTAPADASRGSRHYRARSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRLLWAFWRRRRALATSLFGTHSENSGLSRLARHHPWGRRLATAGAVLLAAAFWFAVIVAVAGPATRGRADGDNNEGEDNATGSGRDGDKGAADVSRPYYRQIPGDFAVGPSQADPWMVRDIEIATAEWGLEGG--GGGDASSEDDGHGGDAAETYSTEGGEGEAAGSLGLGRRSGKRGREWDGRVNSVVMGELEPVGTAKTRPKVDLLLTIFSGTTE 1107
MDPNRRTSA+HLRDSSDAAAAGATAAAPTASEAGEE LSIPLLPSSYSA TPAGSLPPR XXXXXXX L+APLLPSGGAQKRSGGSGGARPL S+ TAPADASRGSRHYR RSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX WAFWRRRRALA SL G E GLSR ARHHPWGRRLATAGAVLLAAA WFAVIVAVAGPAT G+A G NN+G+DNA G GR DKGAAD SRPYYR+IPG+FAVGPSQADPWMVRDIEIATAEWG EGG GGGDASSEDDG STEGGE EAAGSLGLGRRSG+RG EWDGRVNSVV+GELEPVGTAKTRPKVDLLLTIFSGTTE
Sbjct: 1 MDPNRRTSAIHLRDSSDAAAAGATAAAPTASEAGEEALSIPLLPSSYSATTPAGSLPPRXXXXXXXXXXXXXXXXXLKAPLLPSGGAQKRSGGSGGARPLTSSPTAPADASRGSRHYRVRSASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-WAFWRRRRALAASLLGARLEIGGLSRRARHHPWGRRLATAGAVLLAAAIWFAVIVAVAGPATGGKAAGANNKGDDNANGGGRGEDKGAADASRPYYRRIPGEFAVGPSQADPWMVRDIEIATAEWGFEGGSGGGGDASSEDDGRXXXXXXXDSTEGGEDEAAGSLGLGRRSGRRGTEWDGRVNSVVLGELEPVGTAKTRPKVDLLLTIFSGTTE 370
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: A0A6H5KLW3_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLW3_9PHAE) HSP 1 Score: 249 bits (635), Expect = 1.300e-75 Identity = 121/129 (93.80%), Postives = 124/129 (96.12%), Query Frame = 1
Query: 1090 FSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGNNPEPREFTVSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
F ++ADAAKRELLRQIYDKYEGWVKVGGPNSLTEG NPEPREFTVSVVFV+SKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEI GKVY
Sbjct: 27 FPAASQADAAKRELLRQIYDKYEGWVKVGGPNSLTEGTNPEPREFTVSVVFVMSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEISGKVY 155
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: D7G6P0_ECTSI (Hexosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6P0_ECTSI) HSP 1 Score: 162 bits (410), Expect = 6.820e-41 Identity = 82/156 (52.56%), Postives = 108/156 (69.23%), Query Frame = 1
Query: 1009 VNSVVMGELEPVGTAKTRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGNNPEPREFTVSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
++S+ +G L G + P+ DLLL I SG +A KR+ +R++YDKY GWV VGG S + N E E V+FVV++ TAPP+GELVGD+LYV P+GYRNIV K K M+ LVRH DF+FLLKADDD+FVC+ R+A+ LH+ E K K+Y
Sbjct: 162 IHSMDVGPLTDEGD-QLLPRTDLLLAILSGDDKAARLKRDTIRELYDKYGGWVTVGGERS--QEQNEETVEMEFQVIFVVTRSTAPPDGELVGDVLYVNAPDGYRNIVYKVKHMMGLVRHIDFKFLLKADDDTFVCVERLANFLHNQPEESKDKIY 314
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: A0A835Z4X8_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4X8_9STRA) HSP 1 Score: 129 bits (324), Expect = 8.550e-30 Identity = 67/138 (48.55%), Postives = 90/138 (65.22%), Query Frame = 1
Query: 1063 PKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGNNPEPREFTVSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
P D +LTIFSG +E A KRE LR Y Y + V N L+ ++TV V+F+VS AP +G L GD+LYV PEGYRNIVLKTKAML +V HF+F++L+K+DDD+ VCL ++A + L P ++ +VY
Sbjct: 27 PYFDFVLTIFSGDSEQAAEKREQLRTSYSAYSKGLHVQDANGLSH-------DYTVKVLFLVSHPDAPEDGLLDGDVLYVRCPEGYRNIVLKTKAMLSVVAHFNFKYLMKSDDDTVVCLNKVAKRMAVLPPAVQDRVY 157
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: A0A835YWI3_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWI3_9STRA) HSP 1 Score: 119 bits (297), Expect = 8.400e-26 Identity = 60/138 (43.48%), Postives = 89/138 (64.49%), Query Frame = 1
Query: 1063 PKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGNNPEPREFTVSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
P D+LL +FSG +E DA +R+L+R+IY +Y G V L G +++ +VFV + AP +G L GD L + P+GYRNIV KTK M+ L++H +F++L+K+DDD+FVC+ ++ LH+L E K KVY
Sbjct: 111 PTYDMLLVVFSGDSEDDAKRRDLMRRIYGRYRGRVV------LNRGKKSR-KKYKFKLVFVRGRSDAPEDGVLNGDTLLINAPDGYRNIVHKTKGMVSLLKHVNFKYLMKSDDDTFVCVQQVFHRLHNLPEETKKKVY 241
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: A0A6H5JHW0_9PHAE (Hexosyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHW0_9PHAE) HSP 1 Score: 107 bits (268), Expect = 9.210e-22 Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 1057 TRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGNNPEPREFTVSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
TRP D LL +FSG AKR+ +R++Y Y G + + + +T V++VV A G+L+ D+L+V V +GYRNI KTK ML V+H F++LLK DDD+FVCL R AS +H + IK KVY
Sbjct: 141 TRPYFDYLLVVFSGDDTDALAKRDYMREMYGTYGGQILITDERG-------QAFIYTFKVLYVVGHPGAVDMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKTDDDTFVCLRRTASQMHLVPAHIKPKVY 273
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: D7FQB9_ECTSI (Hexosyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQB9_ECTSI) HSP 1 Score: 106 bits (264), Expect = 4.570e-21 Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 1057 TRPKVDLLLTIFSGTTEADAAKRELLRQIYDKYEGWVKVGGPNSLTEGNNPEPREFTVSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
TR D LL +FSG AKR+ +R++Y Y G + + + +T V++VV A G+L+ D+L+V V +GYRNI KTK ML V+H F++LLKADDD+FVCL R AS +H + IK KVY
Sbjct: 181 TRAYFDYLLVVFSGDDTDALAKRDYMRKMYGTYGGQILITDERG-------QAFIYTFKVLYVVGHPGAADMGDLMDDVLFVKVEKGYRNIAAKTKKMLEAVKHVRFKYLLKADDDTFVCLRRTASQMHLVPAHIKPKVY 313
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Match: A0A835YNB7_9STRA (Hexosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNB7_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.420e-20 Identity = 48/83 (57.83%), Postives = 62/83 (74.70%), Query Frame = 1
Query: 1228 VSVVFVVSKETAPPEGELVGDILYVAVPEGYRNIVLKTKAMLCLVRHFDFEFLLKADDDSFVCLTRIASMLHDLDPEIKGKVY 1476
+ V+F+VS A EG+LVGDILYV P GYRNIV KTKAML +V HF+ ++L+K+DDD+FVCL R+A + L P +K KVY
Sbjct: 1 MQVLFLVSHIDASEEGDLVGDILYVQCPAGYRNIVQKTKAMLSIVTHFNHKYLMKSDDDTFVCLNRVAKRMFTLPPAVKEKVY 83 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6036.16664.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6036.16664.1 >prot_Ecto-sp13_S_contig6036.16664.1 ID=prot_Ecto-sp13_S_contig6036.16664.1|Name=mRNA_Ecto-sp13_S_contig6036.16664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=492bp MDPNRRTSAVHLRDSSDAAAAGATAAAPTASEAGEETLSIPLLPSSYSAAback to top mRNA from alignment at Ecto-sp13_S_contig6036:6..4486- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6036.16664.1 ID=mRNA_Ecto-sp13_S_contig6036.16664.1|Name=mRNA_Ecto-sp13_S_contig6036.16664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=4481bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6036:6..4486- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6036:6..4486- >mRNA_Ecto-sp13_S_contig6036.16664.1 ID=mRNA_Ecto-sp13_S_contig6036.16664.1|Name=mRNA_Ecto-sp13_S_contig6036.16664.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1476bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6036:6..4486- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |