prot_Ecto-sp13_S_contig6035.16663.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig6035.16663.1
Unique Nameprot_Ecto-sp13_S_contig6035.16663.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length316
Homology
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: D8LP78_ECTSI (EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI)

HSP 1 Score: 599 bits (1544), Expect = 4.930e-212
Identity = 289/316 (91.46%), Postives = 303/316 (95.89%), Query Frame = 0
Query:    1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 316
            MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFL LYAEEV+SKNKTLSFSELRSDPVFCMYFDVDML TGVLGA  S RIFSVIQSV++SYYTGD+NDDRFRCVVCDTSVK+VPSADGET LTKNGYH I+PNLRI+LSQALQLRYSVVYELEKTLGPRT  LN WSDVIDKAPYT GLKMCGSFKRVKCTDCKKTDPTFKDKKKALLS MA++R+KI+PR+PG+DYTDL+DIHSDEFKDAVFGD YGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ
Sbjct:    1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLQLYAEEVRSKNKTLSFSELRSDPVFCMYFDVDMLGTGVLGAAESSRIFSVIQSVIRSYYTGDQNDDRFRCVVCDTSVKKVPSADGETMLTKNGYHAIFPNLRINLSQALQLRYSVVYELEKTLGPRTGSLNPWSDVIDKAPYTGGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSEMAKLRKKIYPRQPGFDYTDLSDIHSDEFKDAVFGDKYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 316          
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A6H5KIA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA7_9PHAE)

HSP 1 Score: 477 bits (1227), Expect = 5.160e-164
Identity = 226/317 (71.29%), Postives = 267/317 (84.23%), Query Frame = 0
Query:    1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDD-RFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 316
            +LKWLRD DFINNS+  TT T+MTGGVV VP E YDEFL LYA EV+SKNKT+SFSELRS+P FCMYFD+D+LD+  L  E   RI+S+IQ V++S+Y G   D  RF+CVVC T  KRV    GE +LTK+GYHI  PNLR+++ QALQ+RY VVYELEKTLGPR+DGLNAWSDVIDKAPYT+GLKMCGSFKRVKCTD KKTDPTFKDKKKALLSS+A++RRKI+PR  G++Y+DLAD+  DEFKDA+FGD YG+YL+LTGFNSCK CLNTGK +E+RTYMP L LDG GD D SL+D+LR+D F+VMKYTSIRC+
Sbjct:    2 LLKWLRDNDFINNSERRTTHTLMTGGVVGVPHEQYDEFLRLYATEVESKNKTISFSELRSNPAFCMYFDIDLLDSKELSTEVGLRIYSLIQGVVRSFYPGSSGDTGRFQCVVCGTPPKRVDGEAGEKSLTKSGYHITLPNLRVTVEQALQIRYCVVYELEKTLGPRSDGLNAWSDVIDKAPYTNGLKMCGSFKRVKCTDYKKTDPTFKDKKKALLSSIARLRRKIYPRDRGFEYSDLADVQDDEFKDAMFGDMYGRYLELTGFNSCKTCLNTGKRIEERTYMPVLALDGSGDTDASLIDLLRDDLFKVMKYTSIRCK 318          
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: Q6XM41_9PHYC (FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM41_9PHYC)

HSP 1 Score: 249 bits (636), Expect = 9.140e-75
Identity = 132/319 (41.38%), Postives = 192/319 (60.19%), Query Frame = 0
Query:    3 KWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDCKKTDP--TFKDKKKALLSSMAQMRRKIFPRKPG--YDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEK-RTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 316
            ++LR     +N  +  T T+M+GGV+ VP+ENYDEFL +YA E+ S N+ L+FSEL+S  VF MYFD+DML+T  L       +   +   M+ YYT D  +D F+CVVC T     P    +    KNG H+I+P+LR++L  ALQLR+ +V  LE T G R  G+N W D+IDKAPY +GLKMCGS K + C +CK  +   T + +   ++  +  +RRK +PR     +DY+++ +I  DEFK     + + +Y + TG+  C  C N G  +E  R YMP +VL+G G      L+ L ++  E M++TSIRC+
Sbjct:    9 QFLRAHGCFHNKTIPRTHTIMSGGVLYVPEENYDEFLGVYAREIDSGNRGLTFSELKSGDVFRMYFDIDMLETRELDLSYFVHLCRDMVRAMRQYYT-DVEEDTFKCVVCTTK----PKKRTQDEYIKNGCHVIFPSLRVNLETALQLRFFIVQALENTRGVRKIGINPWCDIIDKAPYYNGLKMCGSVKTIPCLECKGANRNITHRPEVVEIVRQIRNVRRKYYPRNDNLAFDYSNVFNIEKDEFKHETLAELFARYQEETGYLMCVACGNRGWYLEHDRFYMPAMVLNGDGSSSEGELEYLHDNPHEAMRWTSIRCR 322          
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: B5LWL0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL0_9PHYC)

HSP 1 Score: 238 bits (607), Expect = 9.890e-71
Identity = 128/300 (42.67%), Postives = 187/300 (62.33%), Query Frame = 0
Query:   19 TQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDC--KKTDPTFKDKKKALLSSMAQMRRKIFPRK--PGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIR 314
            T T+M+GGV+ V +E YDEFL +YA E+   N+TL+FSEL+S+ VF MYFD+DM+D+  L A+    +   +   ++ +Y  D + D F+CVVC T  K  P +D +T   KNG H+I+P L ++L  ALQLR++ V +LE   G R+   N W DVIDKAPY +GLKMCGS K + C++C  KK +   K +  A+L  +  +RRK +PR+  PG+DY+++  I  DEFK+    + +  Y D TG   C  C + G  +E R YMP  VL G G +  + ++ L ++  E M++TSIR
Sbjct:   25 THTIMSGGVLYVAEEYYDEFLGVYAREIDEGNRTLTFSELKSEGVFRMYFDIDMVDSRELSADDFVSLSQCVLETLRKFYI-DIDQDLFKCVVCTTKPK--PLSDKDTF--KNGCHLIFPFLNVTLEMALQLRFAAVRDLETRFGRRSRDANPWCDVIDKAPYFNGLKMCGSVKTLTCSECGGKKKNVRKKPEVAAILRDIRNIRRKTYPRRDDPGFDYSNVMSIEKDEFKNEDLAELFSAYQDETGTLICPACGDKGWHLEDRFYMPAKVLHGDGSLAEADMEYLADNPHETMRWTSIR 319          
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A6C0AYT9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AYT9_9ZZZZ)

HSP 1 Score: 95.5 bits (236), Expect = 2.530e-18
Identity = 64/205 (31.22%), Postives = 105/205 (51.22%), Query Frame = 0
Query:    3 KWLRDKD-FINNSDM-----TTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYT-SGLKMCGSFKRVKCTDCK 200
            KW+  K  FI  +D      T T  ++ GG   +  ++Y EFL L A ++++  K     E R+ PVF    D+DM +T  +  E   ++  ++  +++ YY        F+ ++C    K+V     ET L K G+H+++P++ I++  A +LR   + +L  T G R +  N W DV+D A Y  +GL+M G  K V C  CK
Sbjct:   25 KWVFSKKYFIKTTDSKERKATATHFLLDGGTWGIAKDDYPEFLNLLAIDLQNGEKHY-ICENRT-PVFKFICDIDMYETETVTLEYISKLVELLNGIVEEYYGS------FKVIICGADTKKVLL--NETELIKCGFHLVWPDIWITVETAKKLRVKFIEKLISTFGER-ESYNTWEDVVDLAVYEDNGLRMVGCRKMVICKSCK 218          
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A2U7UEU5_9VIRU (Uncharacterized protein n=1 Tax=Pandoravirus macleodensis TaxID=2107707 RepID=A0A2U7UEU5_9VIRU)

HSP 1 Score: 85.1 bits (209), Expect = 1.230e-14
Identity = 88/318 (27.67%), Postives = 124/318 (38.99%), Query Frame = 0
Query:   25 GGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDR---FRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGP---------------------RTDGLNA-WSDVIDKAPYT-SGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 316
            GGVVSVPD++Y+ FL  YA++V       +  E RS  VF MY D+D+         A   +  ++Q +  S++       R      VV     K++P+  G     K G HI+ PNL ++  QAL +R + +  L++  GP                      TD  +  W  VID   YT +GL+M  S   +KC  CK   P                       +PG                          L   G      C  TGK  E R Y P + LDG G  D   LD + ++    +K TSIRC+
Sbjct:  124 GGVVSVPDDDYNAFLEAYADDV-DHGLAHAVCEQRS-AVFRMYLDIDLTVPRAASRRAVLTLARLLQHITGSFFPDADAVARRTLLMMVVFAAQEKQLPNGRG----VKQGIHIVMPNLFVTWRQALDMRETYLTLLKRAYGPDARAWAAGKKKRDKARKAAEAETDVADCTWEKVIDHNVYTFNGLRMPFSHNVLKCPVCKGAKP-----------------------RPGM-------------------------LPCVG-----PCNGTGKCWEARWYEPVMCLDGAGAEDRLTLDSMAKNARYCLKRTSIRCR 382          
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A2U7UC15_9VIRU (Uncharacterized protein n=1 Tax=Pandoravirus neocaledonia TaxID=2107708 RepID=A0A2U7UC15_9VIRU)

HSP 1 Score: 84.7 bits (208), Expect = 1.660e-14
Identity = 86/321 (26.79%), Postives = 125/321 (38.94%), Query Frame = 0
Query:   25 GGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDR---FRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGP---------------------RTDGLNA----WSDVIDKAPYT-SGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 316
            GGV+SVPD++YD FL  YA++V    K  +  E RS  VF MY D+D+         A   +  ++Q +  S++     + R      VV     K +P+  G     K G HI+ PNL ++  QAL +R + +  L++  GP                     R +  +A    W  VID   YT +GL+M  S   +KC  CK                 A+ R  + P                                         C  TGK  E R Y P + LDG G  D   L+ + ++    +K TSIRC+
Sbjct:  125 GGVLSVPDDDYDAFLEAYADDVDHGIKH-AVCEQRS-AVFRMYLDIDLTVPRAASRRAVLTLARLLQHITGSFFPDADAEARRTLLAMVVFAAQEKALPNGRG----VKQGIHIVMPNLFVTWRQALDMRETYLTLLKRAYGPDARAWAAGKKGRDDAPPTDVNRAEAADAADCTWEKVIDHNVYTFNGLRMPFSHNVLKCPVCKG----------------ARTRPGVVP-------------------------------------CVGPCNGTGKCWEARWYEPAMCLDGAGAEDPLTLEHMGKNVRACLKRTSIRCR 386          
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A381VAQ2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381VAQ2_9ZZZZ)

HSP 1 Score: 79.0 bits (193), Expect = 1.160e-12
Identity = 63/202 (31.19%), Postives = 101/202 (50.00%), Query Frame = 0
Query:    4 WL-RDKDFINNS-DMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEK--TLGPRTDGLNAWSDVIDKAPYTS-GLKMCGSFKRVKCTDCK 200
            WL ++K F+    D   T  ++ GG + +P E Y +F  + + ++   N+    SE R++ +F    D+D +D   L  +    I   IQ  ++ +   D +    + +VC T   +  +  G   L K G HII+PN+ + +  A  LR  ++  L +  TL P     N W +VID A Y+S GL+M GS K+VKC  CK
Sbjct:   12 WLFKNKCFVKRGQDKEYTHLLLDGGKLHIPRELYTDFYNVLSMDICQGNRNC-ISENRTE-IFRFLTDIDYIDEQPLTNDDIEIIAKKIQIGLELFLRNDLSVYERKIIVCTTGEYKTVTDQGYK-LKKTGIHIIWPNVYVDVLHAKYLRSVIIQYLSQHHTLRPSH---NPWEEVIDYAVYSSSGLRMKGSSKKVKCPLCK 207          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LP78_ECTSI4.930e-21291.46EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI[more]
A0A6H5KIA7_9PHAE5.160e-16471.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q6XM41_9PHYC9.140e-7541.38FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a... [more]
B5LWL0_9PHYC9.890e-7142.67Uncharacterized protein n=1 Tax=Feldmannia species... [more]
A0A6C0AYT9_9ZZZZ2.530e-1831.22Uncharacterized protein n=1 Tax=viral metagenome T... [more]
A0A2U7UEU5_9VIRU1.230e-1427.67Uncharacterized protein n=1 Tax=Pandoravirus macle... [more]
A0A2U7UC15_9VIRU1.660e-1426.79Uncharacterized protein n=1 Tax=Pandoravirus neoca... [more]
A0A381VAQ2_9ZZZZ1.160e-1231.19Uncharacterized protein n=1 Tax=marine metagenome ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002755DNA primase, small subunitPFAMPF01896DNA_primase_Scoord: 68..316
e-value: 4.5E-26
score: 92.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig6035contigEcto-sp13_S_contig6035:7641..8588 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig6035.16663.1mRNA_Ecto-sp13_S_contig6035.16663.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig6035 7641..8588 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig6035.16663.1 ID=prot_Ecto-sp13_S_contig6035.16663.1|Name=mRNA_Ecto-sp13_S_contig6035.16663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp
MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKN
KTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTG
DRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQL
RYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDCK
KTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFG
DTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVL
REDYFEVMKYTSIRCQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002755DNA_primase_S