mRNA_Ecto-sp13_S_contig6035.16663.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: D8LP78_ECTSI (EsV-1-45 n=2 Tax=root TaxID=1 RepID=D8LP78_ECTSI) HSP 1 Score: 599 bits (1544), Expect = 4.930e-212 Identity = 289/316 (91.46%), Postives = 303/316 (95.89%), Query Frame = 1
Query: 1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 948
MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFL LYAEEV+SKNKTLSFSELRSDPVFCMYFDVDML TGVLGA S RIFSVIQSV++SYYTGD+NDDRFRCVVCDTSVK+VPSADGET LTKNGYH I+PNLRI+LSQALQLRYSVVYELEKTLGPRT LN WSDVIDKAPYT GLKMCGSFKRVKCTDCKKTDPTFKDKKKALLS MA++R+KI+PR+PG+DYTDL+DIHSDEFKDAVFGD YGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ
Sbjct: 1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLQLYAEEVRSKNKTLSFSELRSDPVFCMYFDVDMLGTGVLGAAESSRIFSVIQSVIRSYYTGDQNDDRFRCVVCDTSVKKVPSADGETMLTKNGYHAIFPNLRINLSQALQLRYSVVYELEKTLGPRTGSLNPWSDVIDKAPYTGGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSEMAKLRKKIYPRQPGFDYTDLSDIHSDEFKDAVFGDKYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 316
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A6H5KIA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIA7_9PHAE) HSP 1 Score: 477 bits (1227), Expect = 5.160e-164 Identity = 226/317 (71.29%), Postives = 267/317 (84.23%), Query Frame = 1
Query: 1 MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDD-RFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 948
+LKWLRD DFINNS+ TT T+MTGGVV VP E YDEFL LYA EV+SKNKT+SFSELRS+P FCMYFD+D+LD+ L E RI+S+IQ V++S+Y G D RF+CVVC T KRV GE +LTK+GYHI PNLR+++ QALQ+RY VVYELEKTLGPR+DGLNAWSDVIDKAPYT+GLKMCGSFKRVKCTD KKTDPTFKDKKKALLSS+A++RRKI+PR G++Y+DLAD+ DEFKDA+FGD YG+YL+LTGFNSCK CLNTGK +E+RTYMP L LDG GD D SL+D+LR+D F+VMKYTSIRC+
Sbjct: 2 LLKWLRDNDFINNSERRTTHTLMTGGVVGVPHEQYDEFLRLYATEVESKNKTISFSELRSNPAFCMYFDIDLLDSKELSTEVGLRIYSLIQGVVRSFYPGSSGDTGRFQCVVCGTPPKRVDGEAGEKSLTKSGYHITLPNLRVTVEQALQIRYCVVYELEKTLGPRSDGLNAWSDVIDKAPYTNGLKMCGSFKRVKCTDYKKTDPTFKDKKKALLSSIARLRRKIYPRDRGFEYSDLADVQDDEFKDAMFGDMYGRYLELTGFNSCKTCLNTGKRIEERTYMPVLALDGSGDTDASLIDLLRDDLFKVMKYTSIRCK 318
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: Q6XM41_9PHYC (FirrV-1-A46 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM41_9PHYC) HSP 1 Score: 249 bits (636), Expect = 9.140e-75 Identity = 132/319 (41.38%), Postives = 192/319 (60.19%), Query Frame = 1
Query: 7 KWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDCKKTDP--TFKDKKKALLSSMAQMRRKIFPRKPG--YDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEK-RTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 948
++LR +N + T T+M+GGV+ VP+ENYDEFL +YA E+ S N+ L+FSEL+S VF MYFD+DML+T L + + M+ YYT D +D F+CVVC T P + KNG H+I+P+LR++L ALQLR+ +V LE T G R G+N W D+IDKAPY +GLKMCGS K + C +CK + T + + ++ + +RRK +PR +DY+++ +I DEFK + + +Y + TG+ C C N G +E R YMP +VL+G G L+ L ++ E M++TSIRC+
Sbjct: 9 QFLRAHGCFHNKTIPRTHTIMSGGVLYVPEENYDEFLGVYAREIDSGNRGLTFSELKSGDVFRMYFDIDMLETRELDLSYFVHLCRDMVRAMRQYYT-DVEEDTFKCVVCTTK----PKKRTQDEYIKNGCHVIFPSLRVNLETALQLRFFIVQALENTRGVRKIGINPWCDIIDKAPYYNGLKMCGSVKTIPCLECKGANRNITHRPEVVEIVRQIRNVRRKYYPRNDNLAFDYSNVFNIEKDEFKHETLAELFARYQEETGYLMCVACGNRGWYLEHDRFYMPAMVLNGDGSSSEGELEYLHDNPHEAMRWTSIRCR 322
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: B5LWL0_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWL0_9PHYC) HSP 1 Score: 238 bits (607), Expect = 9.890e-71 Identity = 128/300 (42.67%), Postives = 187/300 (62.33%), Query Frame = 1
Query: 55 TQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYTSGLKMCGSFKRVKCTDC--KKTDPTFKDKKKALLSSMAQMRRKIFPRK--PGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIR 942
T T+M+GGV+ V +E YDEFL +YA E+ N+TL+FSEL+S+ VF MYFD+DM+D+ L A+ + + ++ +Y D + D F+CVVC T K P +D +T KNG H+I+P L ++L ALQLR++ V +LE G R+ N W DVIDKAPY +GLKMCGS K + C++C KK + K + A+L + +RRK +PR+ PG+DY+++ I DEFK+ + + Y D TG C C + G +E R YMP VL G G + + ++ L ++ E M++TSIR
Sbjct: 25 THTIMSGGVLYVAEEYYDEFLGVYAREIDEGNRTLTFSELKSEGVFRMYFDIDMVDSRELSADDFVSLSQCVLETLRKFYI-DIDQDLFKCVVCTTKPK--PLSDKDTF--KNGCHLIFPFLNVTLEMALQLRFAAVRDLETRFGRRSRDANPWCDVIDKAPYFNGLKMCGSVKTLTCSECGGKKKNVRKKPEVAAILRDIRNIRRKTYPRRDDPGFDYSNVMSIEKDEFKNEDLAELFSAYQDETGTLICPACGDKGWHLEDRFYMPAKVLHGDGSLAEADMEYLADNPHETMRWTSIR 319
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A6C0AYT9_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0AYT9_9ZZZZ) HSP 1 Score: 95.5 bits (236), Expect = 2.530e-18 Identity = 64/205 (31.22%), Postives = 105/205 (51.22%), Query Frame = 1
Query: 7 KWLRDKD-FINNSDM-----TTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGPRTDGLNAWSDVIDKAPYT-SGLKMCGSFKRVKCTDCK 600
KW+ K FI +D T T ++ GG + ++Y EFL L A ++++ K E R+ PVF D+DM +T + E ++ ++ +++ YY F+ ++C K+V ET L K G+H+++P++ I++ A +LR + +L T G R + N W DV+D A Y +GL+M G K V C CK
Sbjct: 25 KWVFSKKYFIKTTDSKERKATATHFLLDGGTWGIAKDDYPEFLNLLAIDLQNGEKHY-ICENRT-PVFKFICDIDMYETETVTLEYISKLVELLNGIVEEYYGS------FKVIICGADTKKVLL--NETELIKCGFHLVWPDIWITVETAKKLRVKFIEKLISTFGER-ESYNTWEDVVDLAVYEDNGLRMVGCRKMVICKSCK 218
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A2U7UEU5_9VIRU (Uncharacterized protein n=1 Tax=Pandoravirus macleodensis TaxID=2107707 RepID=A0A2U7UEU5_9VIRU) HSP 1 Score: 85.1 bits (209), Expect = 1.230e-14 Identity = 88/318 (27.67%), Postives = 124/318 (38.99%), Query Frame = 1
Query: 73 GGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDR---FRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGP---------------------RTDGLNA-WSDVIDKAPYT-SGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 948
GGVVSVPD++Y+ FL YA++V + E RS VF MY D+D+ A + ++Q + S++ R VV K++P+ G K G HI+ PNL ++ QAL +R + + L++ GP TD + W VID YT +GL+M S +KC CK P +PG L G C TGK E R Y P + LDG G D LD + ++ +K TSIRC+
Sbjct: 124 GGVVSVPDDDYNAFLEAYADDV-DHGLAHAVCEQRS-AVFRMYLDIDLTVPRAASRRAVLTLARLLQHITGSFFPDADAVARRTLLMMVVFAAQEKQLPNGRG----VKQGIHIVMPNLFVTWRQALDMRETYLTLLKRAYGPDARAWAAGKKKRDKARKAAEAETDVADCTWEKVIDHNVYTFNGLRMPFSHNVLKCPVCKGAKP-----------------------RPGM-------------------------LPCVG-----PCNGTGKCWEARWYEPVMCLDGAGAEDRLTLDSMAKNARYCLKRTSIRCR 382
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A2U7UC15_9VIRU (Uncharacterized protein n=1 Tax=Pandoravirus neocaledonia TaxID=2107708 RepID=A0A2U7UC15_9VIRU) HSP 1 Score: 84.7 bits (208), Expect = 1.660e-14 Identity = 86/321 (26.79%), Postives = 125/321 (38.94%), Query Frame = 1
Query: 73 GGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDR---FRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEKTLGP---------------------RTDGLNA----WSDVIDKAPYT-SGLKMCGSFKRVKCTDCKKTDPTFKDKKKALLSSMAQMRRKIFPRKPGYDYTDLADIHSDEFKDAVFGDTYGKYLDLTGFNSCKMCLNTGKVMEKRTYMPCLVLDGGGDVDVSLLDVLREDYFEVMKYTSIRCQ 948
GGV+SVPD++YD FL YA++V K + E RS VF MY D+D+ A + ++Q + S++ + R VV K +P+ G K G HI+ PNL ++ QAL +R + + L++ GP R + +A W VID YT +GL+M S +KC CK A+ R + P C TGK E R Y P + LDG G D L+ + ++ +K TSIRC+
Sbjct: 125 GGVLSVPDDDYDAFLEAYADDVDHGIKH-AVCEQRS-AVFRMYLDIDLTVPRAASRRAVLTLARLLQHITGSFFPDADAEARRTLLAMVVFAAQEKALPNGRG----VKQGIHIVMPNLFVTWRQALDMRETYLTLLKRAYGPDARAWAAGKKGRDDAPPTDVNRAEAADAADCTWEKVIDHNVYTFNGLRMPFSHNVLKCPVCKG----------------ARTRPGVVP-------------------------------------CVGPCNGTGKCWEARWYEPAMCLDGAGAEDPLTLEHMGKNVRACLKRTSIRCR 386
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Match: A0A381VAQ2_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381VAQ2_9ZZZZ) HSP 1 Score: 79.0 bits (193), Expect = 1.160e-12 Identity = 63/202 (31.19%), Postives = 101/202 (50.00%), Query Frame = 1
Query: 10 WL-RDKDFINNS-DMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNKTLSFSELRSDPVFCMYFDVDMLDTGVLGAEASFRIFSVIQSVMKSYYTGDRNDDRFRCVVCDTSVKRVPSADGETTLTKNGYHIIYPNLRISLSQALQLRYSVVYELEK--TLGPRTDGLNAWSDVIDKAPYTS-GLKMCGSFKRVKCTDCK 600
WL ++K F+ D T ++ GG + +P E Y +F + + ++ N+ SE R++ +F D+D +D L + I IQ ++ + D + + +VC T + + G L K G HII+PN+ + + A LR ++ L + TL P N W +VID A Y+S GL+M GS K+VKC CK
Sbjct: 12 WLFKNKCFVKRGQDKEYTHLLLDGGKLHIPRELYTDFYNVLSMDICQGNRNC-ISENRTE-IFRFLTDIDYIDEQPLTNDDIEIIAKKIQIGLELFLRNDLSVYERKIIVCTTGEYKTVTDQGYK-LKKTGIHIIWPNVYVDVLHAKYLRSVIIQYLSQHHTLRPSH---NPWEEVIDYAVYSSSGLRMKGSSKKVKCPLCK 207 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6035.16663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6035.16663.1 >prot_Ecto-sp13_S_contig6035.16663.1 ID=prot_Ecto-sp13_S_contig6035.16663.1|Name=mRNA_Ecto-sp13_S_contig6035.16663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=316bp MLKWLRDKDFINNSDMTTTQTVMTGGVVSVPDENYDEFLALYAEEVKSKNback to top mRNA from alignment at Ecto-sp13_S_contig6035:7641..8588+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6035.16663.1 ID=mRNA_Ecto-sp13_S_contig6035.16663.1|Name=mRNA_Ecto-sp13_S_contig6035.16663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6035:7641..8588+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6035:7641..8588+ >mRNA_Ecto-sp13_S_contig6035.16663.1 ID=mRNA_Ecto-sp13_S_contig6035.16663.1|Name=mRNA_Ecto-sp13_S_contig6035.16663.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=948bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6035:7641..8588+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |