mRNA_Ecto-sp13_S_contig6035.16661.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
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Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: Q8QNM2_ESV1K (EsV-1-42 n=2 Tax=root TaxID=1 RepID=Q8QNM2_ESV1K) HSP 1 Score: 321 bits (822), Expect = 1.460e-110 Identity = 160/171 (93.57%), Postives = 166/171 (97.08%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVENGELTESQAQDPMIILQELVQNTELMSALSTKK 513
MTTYKAFNSMLSEFF DLADTFDEY IIMDAKVMLDGVISTDDCSTVPMETFV VFKPHA+L+MAKDP LFDVCEIPMITGG FDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELL+SIEQLANGCMKKVENGELTESQAQDPMIILQE++QNTELMSAL+TKK
Sbjct: 1 MTTYKAFNSMLSEFFRDLADTFDEYTIIMDAKVMLDGVISTDDCSTVPMETFVDVFKPHAELIMAKDPSLFDVCEIPMITGGDFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLNSIEQLANGCMKKVENGELTESQAQDPMIILQEIMQNTELMSALNTKK 171
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: A0A6H5KJD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJD3_9PHAE) HSP 1 Score: 242 bits (618), Expect = 1.010e-73 Identity = 115/146 (78.77%), Postives = 130/146 (89.04%), Query Frame = 1
Query: 16 AFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVENGELTESQAQDPM 453
AFNSMLSEFFCDLADTFDEY +I DAK ML+G+++ D+C+ +PM TFV VFKPHADL+M KDP+LFDVCEI +ITGG FDMAKEW LE+DNREAIWNYIQQLF GTTILSMSG++LSSI+ LA GCMKKVENGELTESQAQDPM
Sbjct: 269 AFNSMLSEFFCDLADTFDEYTVITDAKTMLEGLMAADECTEIPMGTFVEVFKPHADLIMTKDPKLFDVCEILLITGGEFDMAKEWTALEDDNREAIWNYIQQLFPAGTTILSMSGKVLSSIQSLAQGCMKKVENGELTESQAQDPM 414
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: A0A2E0RC34_9RHOB (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A2E0RC34_9RHOB) HSP 1 Score: 72.4 bits (176), Expect = 6.850e-13 Identity = 51/153 (33.33%), Postives = 72/153 (47.06%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVENG--ELTESQAQDPM 453
MT+ AFN M+ +F +L TF E + + + ST+ + + F+ PH + V ++D F M ++ W E R AIW YIQ LF+ GTTI S+ E LS IE +A C K+EN EL E+Q M
Sbjct: 1 MTSVTAFNDMMGQFLTELHKTFPEEKGVKKYIAAFEMMRSTN--GKLIVTGFMDSVSPHIEKVNSRDESFFLENANDMEFLKDVNLKNLWPKASEGTRNAIWQYIQTLFMLGTTITSIPPETLSMIENVAKQCADKMENDGDELDETQLMKSM 151
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: A0A2D6FRW8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6FRW8_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 7.150e-13 Identity = 48/142 (33.80%), Postives = 73/142 (51.41%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDG--VISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVENG 420
M++ AFN M+ +F +L TF E I K + G ++ T + V VGV P AD + AKD F + + ++W + + ++AIW YIQ L++ GTTI S+ + LS IE++A C K+ENG
Sbjct: 1 MSSVTAFNDMMGQFLAELHKTFPEEKGI---KKCMSGFEIMRTSNPRLVIDGFMVGV-APFADKISAKDDTFFINESKNLDFIKDIKLEEKWASVSQQTKDAIWQYIQTLYMLGTTISSIPEDTLSMIEKVAKECADKLENG 138
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: A0A7S6SXR1_9PHYC (Uncharacterized protein n=1 Tax=Bathycoccus sp. RCC716 virus 3 TaxID=2530040 RepID=A0A7S6SXR1_9PHYC) HSP 1 Score: 71.6 bits (174), Expect = 1.440e-12 Identity = 45/148 (30.41%), Postives = 72/148 (48.65%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKV---ENGELTES 435
M + AFN M+ +F +L TF E + D + + + ++ F+ P+ + + AKD F + G ++ K W E+ + AIW Y+Q L++ GTTI S+ + LS IE +A C K+ ENGEL E+
Sbjct: 1 MASVTAFNDMMGQFLVELHKTFPEEKGLKKCLSAFD--LMKEANPRLVVDGFMNGVAPYTEQISAKDDSFFIKESKNLDFMKGVNLEKHWGSCSENTKNAIWQYVQTLYMLGTTIKSIPEDTLSMIETVAKECADKLGSGENGELDEA 146
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: A0A7S6NYF1_9PHYC (Uncharacterized protein n=1 Tax=Bathycoccus sp. RCC716 virus 2 TaxID=2530039 RepID=A0A7S6NYF1_9PHYC) HSP 1 Score: 70.9 bits (172), Expect = 2.820e-12 Identity = 43/140 (30.71%), Postives = 68/140 (48.57%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVENG 420
M + AFN M+ +F +L TF E + D + T+ V + F+ P+AD + AKD F + G ++ W E+ + AIW Y+Q L++ GTTI S+ + LS IE++A C ++E G
Sbjct: 1 MASVSAFNEMMGQFLMELHKTFPEEKGLKKCMSAFDLMKETNPKLVV--DGFMVGVTPYADKISAKDDTFFLEESKNLDFMKGVNLKDHWDSCSENTKNAIWQYVQTLYMLGTTIKSIPEDTLSMIEKVAKQCADQMEEG 138
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: A0A800EGI3_9CHLR (Uncharacterized protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A800EGI3_9CHLR) HSP 1 Score: 68.9 bits (167), Expect = 1.430e-11 Identity = 43/138 (31.16%), Postives = 67/138 (48.55%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVE 414
MT+ AFN M+ +F +L TF E I K M I + ++ F+ P AD + AKD F + + ++W + ++AIW Y+Q L++ GTTI S+ + LS IE++A C K+E
Sbjct: 1 MTSVTAFNDMMGQFLAELHKTFPEEKGIK--KCMSGFEIMRTSNPRLVIDGFMTSVTPFADKISAKDETFFLTEAKNLEFLKDVKLEEKWASVSTKTKDAIWQYVQTLYMLGTTISSIPADTLSMIEKVAKECADKLE 136
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: E5ESA4_9PHYC (Uncharacterized protein n=3 Tax=unclassified Prasinovirus TaxID=880158 RepID=E5ESA4_9PHYC) HSP 1 Score: 68.9 bits (167), Expect = 1.430e-11 Identity = 45/147 (30.61%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKV--ENGELTES 435
MT+ AFN M+ +F +L TF E + D + +++ V + F+ P+AD + +KD F + G ++ K W E+ + AIW Y+Q L++ GTTI S+ + LS IE +A C K+ + EL E+
Sbjct: 1 MTSVTAFNDMMGQFLVELHKTFPEEKGLKKCLSAFDLMKASNPRLVV--DGFMQGVTPYADKISSKDESFFIEESKNLDFMKGVNLEKHWGTASENTKSAIWQYVQTLYMLGTTISSIPEDTLSMIETVAKQCADKMGEDGSELDEA 145
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: G9E601_MPSP1 (Uncharacterized protein n=1 Tax=Micromonas pusilla virus SP1 TaxID=373996 RepID=G9E601_MPSP1) HSP 1 Score: 68.6 bits (166), Expect = 2.040e-11 Identity = 41/142 (28.87%), Postives = 72/142 (50.70%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPR--LFDVCEIPMITGGGFDMAKEWKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVENG 420
M + AFN M+ +F +L TF + I D + S + V + F+ P++D + +KD L ++ I M+ D+ W + ++ ++ W Y+Q L++ GTTI S+S + LS IE++A G ++E G
Sbjct: 1 MASVTAFNDMMGQFLVELHKTFPDEKGIKKMLTSFDLLKSANPRLVV--DGFMSGVSPYSDKISSKDETFLLKEIETIDMLKD--LDIKSYWNRMSQNTKDVTWQYLQTLYMLGTTITSISADTLSQIEEIAKGVASQMEGG 138
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Match: G8DDD4_9PHYC (Uncharacterized protein n=1 Tax=Micromonas pusilla virus PL1 TaxID=373997 RepID=G8DDD4_9PHYC) HSP 1 Score: 67.4 bits (163), Expect = 5.490e-11 Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 1
Query: 1 MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMETFVGVFKPHADLVMAKDPRLFDVCEIPMITGGGFDMAKE------WKDLEEDNREAIWNYIQQLFLTGTTILSMSGELLSSIEQLANGCMKKVENGE 423
M + AFN M+S+F +L TF + I D + ST+ V + F+ P+AD + KD F + EI I D K+ W+ + + R+ W Y+Q L++ GTTI S+ + LS IE +A C K+++G+
Sbjct: 1 MASVTAFNDMMSQFLVELHKTFPDEKGIKKMLTSFDLLKSTNPRLVV--DAFMKGVSPYADKISTKD-ETFLLTEIETI-----DFLKDLNIKGYWERMTTNTRDVTWQYLQTLYMLGTTITSIPEDTLSMIEGIAKECADKMQDGD 139 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6035.16661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6035.16661.1 >prot_Ecto-sp13_S_contig6035.16661.1 ID=prot_Ecto-sp13_S_contig6035.16661.1|Name=mRNA_Ecto-sp13_S_contig6035.16661.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=173bp MTTYKAFNSMLSEFFCDLADTFDEYAIIMDAKVMLDGVISTDDCSTVPMEback to top mRNA from alignment at Ecto-sp13_S_contig6035:5843..6361- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6035.16661.1 ID=mRNA_Ecto-sp13_S_contig6035.16661.1|Name=mRNA_Ecto-sp13_S_contig6035.16661.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=519bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6035:5843..6361- (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6035:5843..6361- >mRNA_Ecto-sp13_S_contig6035.16661.1 ID=mRNA_Ecto-sp13_S_contig6035.16661.1|Name=mRNA_Ecto-sp13_S_contig6035.16661.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=519bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6035:5843..6361- (Ectocarpus species13 EcNAP12_S_4_19m)back to top |