prot_Ecto-sp13_S_contig60346.16657.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60346.16657.1
Unique Nameprot_Ecto-sp13_S_contig60346.16657.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length50
Homology
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BLAST of mRNA_Ecto-sp13_S_contig60346.16657.1 vs. uniprot
Match: D7G613_ECTSI (PUB domain, zinc finger protein Thioredoxin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G613_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.590e-17
Identity = 46/50 (92.00%), Postives = 48/50 (96.00%), Query Frame = 0 
Query:    1 QTSHGNFSESTDAVKALTPEEKEAKLARMKAIIAERRAARGEEEKVDHVK 50
            +TSH NFSEST+ VKALTPEEKEAKLARMKAIIAERRAARGEEEKVDHVK
Sbjct:  318 KTSHDNFSESTEEVKALTPEEKEAKLARMKAIIAERRAARGEEEKVDHVK 367
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BLAST of mRNA_Ecto-sp13_S_contig60346.16657.1 vs. uniprot
Match: A0A7S2V754_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V754_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 5.310e-9
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0 
Query:    1 QTSHGNFSESTDAVKALTPEEKEAKLARMKAIIAERRAARGEEEKVDHV 49
            +T H NF EST+A+K L+PEEK  K+  +KA IA RRAAR EEEKVDHV
Sbjct:   77 KTGHANFEESTEAIKPLSPEEKAKKIEELKAKIAARRAAREEEEKVDHV 125
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60346.16657.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G613_ECTSI1.590e-1792.00PUB domain, zinc finger protein Thioredoxin n=1 Ta... [more]
A0A7S2V754_9STRA5.310e-965.31Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60346contigEcto-sp13_S_contig60346:629..778 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60346.16657.1mRNA_Ecto-sp13_S_contig60346.16657.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60346 629..778 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60346.16657.1 ID=prot_Ecto-sp13_S_contig60346.16657.1|Name=mRNA_Ecto-sp13_S_contig60346.16657.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=50bp
QTSHGNFSESTDAVKALTPEEKEAKLARMKAIIAERRAARGEEEKVDHVK
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