prot_Ecto-sp13_S_contig60316.16654.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60316.16654.1
Unique Nameprot_Ecto-sp13_S_contig60316.16654.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length61
Homology
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BLAST of mRNA_Ecto-sp13_S_contig60316.16654.1 vs. uniprot
Match: D7FL28_ECTSI (Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL28_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 4.480e-11
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = 0 
Query:   24 SRNGGTRNAKVNGTDEVAADLLRRSERYYLRGVSEVSR 61
            S  GGTR A+VNGTDEVAADLLRRSERYYLRGVSEVSR
Sbjct: 3960 SGEGGTRKAEVNGTDEVAADLLRRSERYYLRGVSEVSR 3997
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BLAST of mRNA_Ecto-sp13_S_contig60316.16654.1 vs. uniprot
Match: A0A6H5JCJ9_9PHAE (Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCJ9_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 6.120e-11
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = 0 
Query:   24 SRNGGTRNAKVNGTDEVAADLLRRSERYYLRGVSEVSR 61
            S +GGTR AKVNGTD+VAADLLRRSERYYLRGVSE+SR
Sbjct: 3127 SGDGGTRKAKVNGTDDVAADLLRRSERYYLRGVSELSR 3164
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60316.16654.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FL28_ECTSI4.480e-1189.47Midasin n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
A0A6H5JCJ9_9PHAE6.120e-1186.84Midasin n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60316contigEcto-sp13_S_contig60316:128..310 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60316.16654.1mRNA_Ecto-sp13_S_contig60316.16654.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60316 128..312 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60316.16654.1 ID=prot_Ecto-sp13_S_contig60316.16654.1|Name=mRNA_Ecto-sp13_S_contig60316.16654.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=61bp
STSCRYRSPFAKTASPASTPPGSSRNGGTRNAKVNGTDEVAADLLRRSER
YYLRGVSEVSR
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