mRNA_Ecto-sp13_S_contig603.16649.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp13_S_contig603.16649.1
Unique NamemRNA_Ecto-sp13_S_contig603.16649.1
TypemRNA
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Homology
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: D8LNZ4_ECTSI (Pyridoxal phosphate homeostasis protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNZ4_ECTSI)

HSP 1 Score: 492 bits (1267), Expect = 2.480e-174
Identity = 248/251 (98.80%), Postives = 249/251 (99.20%), Query Frame = 1
Query:  253 MSEAELKSEPKATGASPIADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 1005
            MSEAELKSEPKATGASPIADNLEAVRKRVEEV GEGE GKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDA+AGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK
Sbjct:    1 MSEAELKSEPKATGASPIADNLEAVRKRVEEVTGEGEAGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAVAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 251          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A0A835YW12_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW12_9STRA)

HSP 1 Score: 283 bits (724), Expect = 5.760e-92
Identity = 149/244 (61.07%), Postives = 183/244 (75.00%), Query Frame = 1
Query:  274 SEPKATGASPIADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 1005
            +E   T    I   LE+V++RV   + E  +     RLVAVSKTKP+ +L  AYDAGQRIFGENY QELIDK+PQMP+DV WHFIGHLQS KA  LVA VPNL  +ET+D  K+A+KL SAC ++ R   L VYLQ+DTSGE++K+G+   D +   +LA+H+ ++CP LELKGLMTIGAP D ECF+RL ACR  +A  LG++A +LELSMGMSGD+EEAI RGST+VRVGSTIFGAR Y NK
Sbjct:    2 AESAGTDDGHIKAALESVKQRVAAASAERGSAHAT-RLVAVSKTKPVSDLMAAYDAGQRIFGENYVQELIDKAPQMPEDVQWHFIGHLQSKKANGLVAKVPNLVAVETVDDDKIASKLNSACAAAGRASKLQVYLQVDTSGEETKSGV---DPEGAPTLAKHVVEDCPNLELKGLMTIGAPDDFECFNRLAACRHEVAEALGVDAASLELSMGMSGDFEEAIARGSTSVRVGSTIFGARNYANK 241          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A8HP79_CHLRE (Pyridoxal phosphate homeostasis protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A8HP79_CHLRE)

HSP 1 Score: 254 bits (650), Expect = 1.260e-80
Identity = 138/243 (56.79%), Postives = 174/243 (71.60%), Query Frame = 1
Query:  301 PIADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQ---ELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVS-SERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAP---GDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNKA 1008
            PIA  L+ V  R+++         PV RLVAVSKTKP E LQ+AYDAGQR+FGENY Q   E++DK+P +P DV WHFIGHLQSNK KA++ GVPNLA++ET+D+ KLA+KL     + S R  PL V +Q++TSGE+SK G+  ++   C+SLA+H+  NCP L L GLMTIG P      ECF  L+ CRDA+A  LG+  + LELSMGMSGD+E+AI  GSTN+RVGSTIFGAR Y  K+
Sbjct:    5 PIAAALQDVLSRMKQATERANRTHPV-RLVAVSKTKPAEALQEAYDAGQRVFGENYVQARCEMLDKAPALPGDVQWHFIGHLQSNKVKAVLEGVPNLAMVETVDSAKLADKLNKTLETVSGRTAPLAVMVQVNTSGEESKYGVEPTE---CVSLAKHIAQNCPKLRLAGLMTIGMPDYSSRPECFICLSGCRDAVATELGLRPEQLELSMGMSGDFEQAIEMGSTNIRVGSTIFGAREYKPKS 243          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A0A0M0JUN8_9EUKA (Pyridoxal phosphate homeostasis protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JUN8_9EUKA)

HSP 1 Score: 254 bits (648), Expect = 2.360e-80
Identity = 138/234 (58.97%), Postives = 173/234 (73.93%), Query Frame = 1
Query:  298 SPIADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSAC--VSSERKRPLGVYLQIDTSG-EDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGAR 990
            S IA  L  VR+++ E A   +  +P PRLVAVSKTKP+E L++AYDAG R FGENY QEL+ K+P+MPDDV W FIG LQSNKAK LV GVP+LA +ETLD+VKLA++LQ A   +S  R  PLGV +Q++TS  E SK G+   +  A   LA H+   CP+L L GLMTIG PG++ CFD L +CRDA+A  LG+EA +LELSMGMSGD+E A+ +GS +VRVGS+IFGAR
Sbjct:   17 SSIASALGNVRQKLAEAASAAK--RPAPRLVAVSKTKPVELLREAYDAGVRDFGENYVQELVSKAPEMPDDVAWRFIGSLQSNKAKTLVHGVPSLACIETLDSVKLADRLQKAMDDLSPRRATPLGVMIQVNTSPWEGSKNGVLAEEAQA---LAMHVVVKCPSLRLCGLMTIGEPGNLACFDTLRSCRDAVAAQLGVEAGSLELSMGMSGDFEAAVAKGSDSVRVGSSIFGAR 245          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A0A7S2V490_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V490_9STRA)

HSP 1 Score: 253 bits (647), Expect = 2.570e-80
Identity = 130/242 (53.72%), Postives = 176/242 (72.73%), Query Frame = 1
Query:  289 TGASPIADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDA-GQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDM--ECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 1005
            +G SPI   +E++R+++ +V     +G    RLVAVSKTKP  ++++AY+  GQ  FGENY QE+++K+PQ+PDD+ WHFIGH+QSNKA+ LV GVPNL  +ET+D+VKLAN L  AC++  R+ PLGV +Q++TSGE  K+G+   D   CL LARH+ ++CP+L+ +GLMTIG  GD   +CF  L  CR  ++  LG+  + LE+SMGMSGD E A+  GSTNVRVGSTIFGAR Y NK
Sbjct:    5 SGNSPIVSAIESIREQISDVCQR--SGLKEARLVAVSKTKPSSDIEEAYNGCGQLHFGENYVQEIVEKAPQLPDDICWHFIGHVQSNKARPLVEGVPNLWSVETVDSVKLANALNKACMAIGREAPLGVMVQVNTSGETQKSGVAPED---CLDLARHISESCPSLKFQGLMTIGRLGDPSPDCFQCLLDCRKQVSEALGLGEEELEMSMGMSGDLELALEMGSTNVRVGSTIFGARTYANK 241          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A0A0D2JXI3_9CHLO (Pyridoxal phosphate homeostasis protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2JXI3_9CHLO)

HSP 1 Score: 253 bits (646), Expect = 4.150e-80
Identity = 135/241 (56.02%), Postives = 168/241 (69.71%), Query Frame = 1
Query:  292 GASPIADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAP---GDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 1005
            G   +AD L+ V +RVE    +    KP PRLVAVSKTKP E +++AYDAG R FGENY QEL+DK+P +P D+ WHFIGHLQSNK KALV GVPNL+++ET+D+ KLA+++      + RK PL V +Q++TSGE+SK G+  +D+   ++LA H+   CP L L GLMTIG P      E F+ L  CRD +A  LGM    LELSMGMSGD+E AI  GSTNVRVGSTIFGAR Y  K
Sbjct:    8 GQRSVADALQDVAQRVEAAGSKAGRAKP-PRLVAVSKTKPAEAVREAYDAGHRTFGENYVQELLDKAPLLPSDIQWHFIGHLQSNKVKALVEGVPNLSMIETVDSAKLADRIDRCVAGAGRKEPLAVAVQVNTSGEESKYGVEPADV---VALATHVAKACPHLRLAGLMTIGMPDYSSRPENFECLAKCRDEVAAALGMSPDDLELSMGMSGDFEAAIAMGSTNVRVGSTIFGARDYSAK 244          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A0A7R9Y898_9VIRI (Pyridoxal phosphate homeostasis protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y898_9VIRI)

HSP 1 Score: 251 bits (642), Expect = 6.390e-80
Identity = 130/218 (59.63%), Postives = 165/218 (75.69%), Query Frame = 1
Query:  367 GKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHL-KDNCPALELKGLMTIGAP---GDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNKA 1008
            G   PRLVAVSKTKP+E L++AY AGQR+FGENY QE+ +K+PQMP+DV WH+IGHLQSNKA ALV GVP+LA +E++D+ K+A KL +AC ++ R   LGV +Q++TSGE+SKAG+   +  A + LA+H+  + CP LEL GLMTIG P      E F+ L  CR  +A  L ++  AL+LSMGMSGD+E A+R GSTNVRVGSTIFGAR YPNKA
Sbjct:    1 GGRAPRLVAVSKTKPVELLREAYAAGQRVFGENYVQEITEKAPQMPEDVQWHYIGHLQSNKANALVKGVPSLACVESVDSAKIATKLSNACENAGRADKLGVMVQVNTSGEESKAGVEPGE--AAVELAKHIVSEACPNLELLGLMTIGMPDYTSKPENFECLARCRAEVAAALALDEDALDLSMGMSGDFEAAVRMGSTNVRVGSTIFGARSYPNKA 216          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: W7TMB7_9STRA (Pyridoxal phosphate homeostasis protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMB7_9STRA)

HSP 1 Score: 255 bits (651), Expect = 9.720e-80
Identity = 136/238 (57.14%), Postives = 175/238 (73.53%), Query Frame = 1
Query:  304 IADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLG----VYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 1005
            + +NL  VR RV+EVA   E   P PRLVAVSKTKP+  L++AYDAGQR FGENY+ E+++K+P++PDDV WHFIGHLQSNKAKALV  VPNL ++E +D++KLA++LQ+A       R  G    + +QIDTSGE +K+G    D      +A+H+   CPAL+  G+MTIGA GDM CFD+L   R+A+A   G++A +LELSMGMS D+EEAI RGSTN+RVGSTIFGAR Y +K
Sbjct:   79 VGENLARVRHRVKEVAKGLE---PPPRLVAVSKTKPVAALKEAYDAGQRHFGENYSHEVLEKAPELPDDVKWHFIGHLQSNKAKALVEQVPNLWMVEAVDSIKLADRLQAATAGVLETRRKGERLKILVQIDTSGEATKSGKRTEDAAV---IAQHVTAQCPALQFAGVMTIGASGDMTCFDKLVDAREAIARATGLDAASLELSMGMSNDFEEAIARGSTNIRVGSTIFGARQYRSK 310          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A0A150G956_GONPE (Pyridoxal phosphate homeostasis protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G956_GONPE)

HSP 1 Score: 251 bits (642), Expect = 1.780e-79
Identity = 130/233 (55.79%), Postives = 169/233 (72.53%), Query Frame = 1
Query:  316 LEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAP---GDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 1005
            L+ V  R+++ +      +P+ RLVAVSKTKP+E LQ+AYDAGQR+FGENY QE++DK P +P D+ WHFIGHLQSNK KA+V GVPNL+++ET+D+ KLA++L  A   + R  PL V +Q++TSGE+SK G+   + D C+ +ARH+  NCP L L GLMTIG P      E F  L  CR  +A  LG+  ++LELSMGMSGD+E+AI  GSTN+RVGSTIFGAR YP K
Sbjct:   10 LKDVMSRMKQASERAGRTQPI-RLVAVSKTKPVEALQEAYDAGQRVFGENYVQEMLDKVPALPADIQWHFIGHLQSNKVKAVVEGVPNLSMVETVDSTKLADRLNRAVEQAGRPEPLAVMVQVNTSGEESKYGV---EPDGCVDVARHIAKNCPRLRLAGLMTIGQPDYSSRPENFSCLADCRRRVAAELGLPDESLELSMGMSGDFEQAIEMGSTNIRVGSTIFGAREYPAK 238          
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Match: A0A7S2HHW6_9EUKA (Pyridoxal phosphate homeostasis protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HHW6_9EUKA)

HSP 1 Score: 251 bits (642), Expect = 2.630e-79
Identity = 142/264 (53.79%), Postives = 180/264 (68.18%), Query Frame = 1
Query:  229 RISTTRRAMSEAELKSEPKATGASP--IADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQRIFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETLDTVKLANKLQSAC--VSSERKRPLGVYLQIDTSG-EDSKAGIYHSDLDACLSLARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAMAGGLGMEAQALELSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNK 1005
            R + T      A +++ P    A    +A  L +V+ ++ + AG   T  P PRLVAVSKTKP+E L++AY+AGQR FGENY QEL+ K+P+MPD V W FIG LQSNKAK LV GVP+LAV+ETLD+VKLA++LQ AC  +S  R  PLGV +Q++TS  E SK G+   +      LA H+   CP L L GLMTIGAPGD  CF+ L  CR+A+A  + M  + LELSMGMSGD+E AI  GS++VRVGS+IFGAR YP K
Sbjct:    1 RSAATTWPYRNAPIRARPVCNAADELSVAARLRSVQDKIADAAG---TADP-PRLVAVSKTKPVELLREAYEAGQRDFGENYVQELVAKAPEMPDSVTWRFIGKLQSNKAKTLVHGVPSLAVVETLDSVKLADRLQKACQEMSPPRLAPLGVMVQVNTSPWEGSKNGVAAEE---AAELATHVVSACPDLRLVGLMTIGAPGDASCFETLRTCREAVAAAVNMSPEDLELSMGMSGDFEAAIAAGSSSVRVGSSIFGARDYPPK 257          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig603.16649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNZ4_ECTSI2.480e-17498.80Pyridoxal phosphate homeostasis protein n=1 Tax=Ec... [more]
A0A835YW12_9STRA5.760e-9261.07Pyridoxal phosphate homeostasis protein n=1 Tax=Tr... [more]
A8HP79_CHLRE1.260e-8056.79Pyridoxal phosphate homeostasis protein n=3 Tax=Ch... [more]
A0A0M0JUN8_9EUKA2.360e-8058.97Pyridoxal phosphate homeostasis protein n=1 Tax=Ch... [more]
A0A7S2V490_9STRA2.570e-8053.72Pyridoxal phosphate homeostasis protein n=1 Tax=Fi... [more]
A0A0D2JXI3_9CHLO4.150e-8056.02Pyridoxal phosphate homeostasis protein n=1 Tax=Mo... [more]
A0A7R9Y898_9VIRI6.390e-8059.63Pyridoxal phosphate homeostasis protein n=1 Tax=Pr... [more]
W7TMB7_9STRA9.720e-8057.14Pyridoxal phosphate homeostasis protein n=1 Tax=Na... [more]
A0A150G956_GONPE1.780e-7955.79Pyridoxal phosphate homeostasis protein n=1 Tax=Go... [more]
A0A7S2HHW6_9EUKA2.630e-7953.79Pyridoxal phosphate homeostasis protein n=1 Tax=Ha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig603contigEcto-sp13_S_contig603:2530..4154 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score493.8
Seed ortholog evalue6.3e-137
Seed eggNOG ortholog2880.D8LNZ4
Preferred namePROSC
Model size1011
KEGG rclassRC00553
KEGG koko:K01469,ko:K06997
KEGG ReactionR00251
KEGG Pathwayko00480,map00480
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006522,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009078,GO:0009987,GO:0010467,GO:0019538,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0051604,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901605
Exons3
EggNOG free text desc.pyridoxal phosphate binding
EggNOG OGsCOG0325@1,KOG3157@2759
Ec32 ortholog descriptionUncharacterised protein family UPF0001
Ec32 orthologEc-01_000520.1
EC3.5.2.9
Cds size1011
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1681463839.5626607-CDS-Ecto-sp13_S_contig603:2529..29971681463839.5626607-CDS-Ecto-sp13_S_contig603:2529..2997Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig603 2530..2997 +
1681463839.5755923-CDS-Ecto-sp13_S_contig603:3254..34161681463839.5755923-CDS-Ecto-sp13_S_contig603:3254..3416Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig603 3255..3416 +
1681463839.5856025-CDS-Ecto-sp13_S_contig603:3773..41541681463839.5856025-CDS-Ecto-sp13_S_contig603:3773..4154Ectocarpus species13 EcNAP12_S_4_19mCDSEcto-sp13_S_contig603 3774..4154 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig603.16649.1prot_Ecto-sp13_S_contig603.16649.1Ectocarpus species13 EcNAP12_S_4_19mpolypeptideEcto-sp13_S_contig603 2530..4154 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp13_S_contig603.16649.1

>prot_Ecto-sp13_S_contig603.16649.1 ID=prot_Ecto-sp13_S_contig603.16649.1|Name=mRNA_Ecto-sp13_S_contig603.16649.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=337bp
MNSRSLFERSVASFASFSRAPHPAWLATTPGSSSSSSSSSFNKKLDNAPL
RTKTTLAFQAQPRPLALYSLPLGPFRRISTTRRAMSEAELKSEPKATGAS
PIADNLEAVRKRVEEVAGEGETGKPVPRLVAVSKTKPLENLQDAYDAGQR
IFGENYAQELIDKSPQMPDDVVWHFIGHLQSNKAKALVAGVPNLAVLETL
DTVKLANKLQSACVSSERKRPLGVYLQIDTSGEDSKAGIYHSDLDACLSL
ARHLKDNCPALELKGLMTIGAPGDMECFDRLNACRDAMAGGLGMEAQALE
LSMGMSGDYEEAIRRGSTNVRVGSTIFGARFYPNKA*
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mRNA from alignment at Ecto-sp13_S_contig603:2530..4154+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp13_S_contig603.16649.1 ID=mRNA_Ecto-sp13_S_contig603.16649.1|Name=mRNA_Ecto-sp13_S_contig603.16649.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=1625bp|location=Sequence derived from alignment at Ecto-sp13_S_contig603:2530..4154+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACTCACGCTCCCTCTTTGAACGCTCGGTGGCATCCTTTGCTTCCTT CTCAAGAGCGCCTCACCCAGCGTGGCTCGCAACAACACCCGGCAGCAGCA GCAGCAGCAGCAGCAGCAGCTTCAACAAGAAACTCGACAACGCACCCCTT CGAACCAAGACCACTCTCGCGTTTCAAGCGCAGCCTAGACCTCTAGCCCT CTACTCGCTCCCTCTTGGCCCTTTCAGACGAATCAGCACTACGCGCAGAG CCATGTCGGAGGCAGAGTTAAAATCGGAGCCAAAGGCGACCGGTGCATCA CCTATCGCTGACAACTTGGAAGCCGTCCGCAAGCGAGTTGAGGAGGTTGC AGGGGAGGGAGAGACAGGCAAGCCCGTTCCACGCTTGGTCGCCGTCAGCA AGACGAAGCCTTTGGAGAACCTCCAAGACGCCTACGACGCAGGGCAGCGG ATTTTCGGAGAAAACTACGTGAGGGGTTGTGTCCAGGGGTTCGAGAGGTT ACCTGTGTGTTGCCATTCGGTGTGTGGCAGAAAATACAGACAACATGACG GACGAAACGTATGGCACGTTGCAGGAAGGTACTAGCAACGATTTCCCTGT TCTCGTAGAGATACCTCCAATACACGGCCATGCCGGTTGTTGACACAGGC GTTCATCGACCGCGAACCACTACTGTTCCCACTTCTTCTCTCATTCACCC CCCTTTGAAACACTTTTTCTTTCAGGCCCAAGAGTTGATCGACAAGTCGC CGCAAATGCCGGACGACGTCGTCTGGCACTTCATCGGACACCTGCAGTCC AACAAGGCTAAGGCTCTAGTGGCGGGGGTGCCCAACCTCGCTGTTCTGGA GACACTCGACACTGTGAAGCTCGCCAACAAGTTACAGGTTGGCTGCGTGT GGGATTAGCGGGAATATGTGCGGGCTGGGGCGAAGGAACCAATCGCGCTC GTGTTGCCTACTCGAACTAGAGGGCTGTTGTGCATGAAAACAGTTGGCAG ATAATTGAAACTGTTCCTGCTGCTCAAGTCTCAAGTACTTCGAGGGTTGG GGTACCTCCTCGGGAACGATGCTCCTCTCGCGGTAAAGCGCACGGACAAA CTCGAGCTTGACAGGGGTCCAAATGTTTTGTCCTTTTGAGCATGTTGCAC AGTGGAAGCCGTCTGAATCGCAACCTTTTCCCGCCCACCAATCAACTTTT CAACCTTCCTCTCTTCCCCCCAAACCCACCCTACCAATCCGCAGTCGGCA TGCGTTTCGTCGGAAAGGAAGCGACCGCTCGGCGTGTACCTCCAGATCGA TACCAGCGGGGAGGACTCCAAAGCAGGAATATACCACTCCGACCTCGATG CATGTCTGTCCCTGGCGCGACACCTCAAGGACAATTGCCCGGCGCTCGAG CTGAAGGGGCTCATGACCATCGGGGCGCCGGGGGACATGGAGTGCTTTGA TAGGCTGAACGCCTGTCGCGACGCGATGGCTGGTGGGTTGGGGATGGAGG CGCAAGCTTTGGAGCTCAGCATGGGCATGTCGGGCGACTACGAGGAGGCG ATTCGAAGGGGCAGTACCAATGTACGCGTAGGGAGCACGATCTTTGGGGC TAGATTTTACCCGAACAAGGCTTGA
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Coding sequence (CDS) from alignment at Ecto-sp13_S_contig603:2530..4154+

>mRNA_Ecto-sp13_S_contig603.16649.1 ID=mRNA_Ecto-sp13_S_contig603.16649.1|Name=mRNA_Ecto-sp13_S_contig603.16649.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1011bp|location=Sequence derived from alignment at Ecto-sp13_S_contig603:2530..4154+ (Ectocarpus species13 EcNAP12_S_4_19m)
ATGAACTCACGCTCCCTCTTTGAACGCTCGGTGGCATCCTTTGCTTCCTT
CTCAAGAGCGCCTCACCCAGCGTGGCTCGCAACAACACCCGGCAGCAGCA
GCAGCAGCAGCAGCAGCAGCTTCAACAAGAAACTCGACAACGCACCCCTT
CGAACCAAGACCACTCTCGCGTTTCAAGCGCAGCCTAGACCTCTAGCCCT
CTACTCGCTCCCTCTTGGCCCTTTCAGACGAATCAGCACTACGCGCAGAG
CCATGTCGGAGGCAGAGTTAAAATCGGAGCCAAAGGCGACCGGTGCATCA
CCTATCGCTGACAACTTGGAAGCCGTCCGCAAGCGAGTTGAGGAGGTTGC
AGGGGAGGGAGAGACAGGCAAGCCCGTTCCACGCTTGGTCGCCGTCAGCA
AGACGAAGCCTTTGGAGAACCTCCAAGACGCCTACGACGCAGGGCAGCGG
ATTTTCGGAGAAAACTACGCCCAAGAGTTGATCGACAAGTCGCCGCAAAT
GCCGGACGACGTCGTCTGGCACTTCATCGGACACCTGCAGTCCAACAAGG
CTAAGGCTCTAGTGGCGGGGGTGCCCAACCTCGCTGTTCTGGAGACACTC
GACACTGTGAAGCTCGCCAACAAGTTACAGTCGGCATGCGTTTCGTCGGA
AAGGAAGCGACCGCTCGGCGTGTACCTCCAGATCGATACCAGCGGGGAGG
ACTCCAAAGCAGGAATATACCACTCCGACCTCGATGCATGTCTGTCCCTG
GCGCGACACCTCAAGGACAATTGCCCGGCGCTCGAGCTGAAGGGGCTCAT
GACCATCGGGGCGCCGGGGGACATGGAGTGCTTTGATAGGCTGAACGCCT
GTCGCGACGCGATGGCTGGTGGGTTGGGGATGGAGGCGCAAGCTTTGGAG
CTCAGCATGGGCATGTCGGGCGACTACGAGGAGGCGATTCGAAGGGGCAG
TACCAATGTACGCGTAGGGAGCACGATCTTTGGGGCTAGATTTTACCCGA
ACAAGGCTTGA
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