mRNA_Ecto-sp13_S_contig6026.16645.1 (mRNA) Ectocarpus species13 EcNAP12_S_4_19m
|
Overview
Homology
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: D8LKE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE8_ECTSI) HSP 1 Score: 696 bits (1795), Expect = 2.840e-250 Identity = 333/337 (98.81%), Postives = 336/337 (99.70%), Query Frame = 1
Query: 1 KVKEGLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEGLFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKRGITKVLDADGGGQHSAILGETAD 1011
+VKEGLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSL+VTRADADVYACGLNSYGQLGLGDTDNRKRLALV+DLAALNTMAVAGGGMHSLVLTTEGLFSFGRKDSGQLGCTAAINK DWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKRGITKVLDADGGGQHSAILGETAD
Sbjct: 194 EVKEGLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLLVTRADADVYACGLNSYGQLGLGDTDNRKRLALVRDLAALNTMAVAGGGMHSLVLTTEGLFSFGRKDSGQLGCTAAINKGDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKRGITKVLDADGGGQHSAILGETAD 530
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: A0A835YVE8_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVE8_9STRA) HSP 1 Score: 276 bits (705), Expect = 9.700e-86 Identity = 158/337 (46.88%), Postives = 199/337 (59.05%), Query Frame = 1
Query: 16 LEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDE-EPPYDFDGIQRDHLTPAGMYRAAEDGGARME--NVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKD-VDCNLPKKVDTAKRGIT----KVLDADGGGQHSAILG 999
+ G I +A+GDCQ++A+ LSGKVY WGC KDKEGKQW +G K K + P+V+ L VA+++C S +AL G + SWGIGE ELGR C +K+ E E YDF I +DHLTP MY + KAIGCG +H+L VT A A V+ CGLN+YGQLG GDTDNR+ L V L +V GG HSL L G + +FGR D GQLG ++ ++K G+ E P V +P AG P K+ G NH L ITD +YTWGY + GALGHG + D LPK +D AK G +V+DADGGG HSAI+G
Sbjct: 149 MRGEVIRQVAAGDCQSLAVTLSGKVYAWGCHKDKEGKQWQTPLPREGPKTAKRKQETPMVVVSLD-RVAEVRCCASANVALRQDGSLWSWGIGESSELGRPACDLKMKVRQADGEYEDVYDFKNIVKDHLTPGPMYAQGTSTPVHQKFGAFKAIGCGAYHALAVTAAGARVFTCGLNNYGQLGTGDTDNREFLTEVTALDGWAVSSVTGGTHHSLALCATGAVLAFGRSDYGQLG-SSEVDKGAGGS-EPLPRLVDVPKAAGKPVKIASGANHSLCITDACGVYTWGYSDEGALGHGSEGQDVWLPKAIDFAKAGAEVAGMRVVDADGGGSHSAIVG 482
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: A0A7S2WNI2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WNI2_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.520e-81 Identity = 147/343 (42.86%), Postives = 203/343 (59.18%), Query Frame = 1
Query: 13 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQA---PADKGSKACKGAAKR---PIVISGLPPH-VADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLG----DTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKRGITK--VLDADGGGQHSAILG 999
GL+G ++ ++ GDCQT+ + + G VYGWGC+KD+EGK+WF + P+ +A K ++ P+ I LP VAD+ CG SF AL G VL+WG+GE+GELGR +MK P E YD G+ RDH+TP A+ G + +K++GCG +H VV+ + + VY+ GLN YGQLGLG N+ +L VQ L GG HS+ LT +G +F++GR D GQLG A G ++ SP+EV P+GA S +V CG NH LV+T K ++Y+WG+G+ GALGH D D P+ +D K + VL GGGQHSA+LG
Sbjct: 242 GLQGEQVVHVSCGDCQTLVVTVDGNVYGWGCYKDREGKKWFDSSLPPSASPQEAVKTIKRQQDVPMKILALPETMVADLCCGASFNAALLKDGRVLTWGLGEVGELGRPAAAMK----PDGAE---YDKTGVFRDHVTPGAPVLAS---GEALPAMKSVGCGMYHLFVVSASGSSVYSAGLNVYGQLGLGYVGDGLSNKDKLEAVQSLDGQGVACCTGGNHHSMALTGDGRVFTWGRADYGQLGIARADTAA--GGYQASPIEVEFPAGAASVTRVSCGNNHNLVLTSKKQVYSWGFGDSGALGHASDEDEMCPRMIDFKKAKLEHIDVLQLAGGGQHSALLG 572
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: H3GSC6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GSC6_PHYRM) HSP 1 Score: 263 bits (672), Expect = 1.650e-80 Identity = 144/341 (42.23%), Postives = 205/341 (60.12%), Query Frame = 1
Query: 13 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREV-CSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPS----GAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKR--GITKVLDADGGGQHSAILGETAD 1011
G + AT + + GDC T + L+GKVY WGC++DKEGKQW + + K ++ K P +I L +V D++CG++F LA T G V SWG+GE+G+LGR+V MK D + Y + + R+HL P + + + VKAIGCG FHSL T ++ +Y+CGLN+YGQLG+G T+N L LV+DL++ N V GG HS+VLT +G ++SFGR DSGQLG N G F+ P +V P+ G+ R + G+NH L +T+ L++WGYG+M ALGHG + D N P+++D K G +L + GGQHSA+L A+
Sbjct: 191 GPDQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDSASPK--ESFKKKQVEPFLIKALD-NVVDVRCGSAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMK-------DSKGDYKVEMVFREHLAPKPVMLGKDP----LPVVKAIGCGSFHSLFATSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTNDGDVYSFGRADSGQLGTLETCNT---GEFKDRPQKVTTPTPKDGGSSVVRMIATGSNHVLSLTESGALFSWGYGDMLALGHGAEHDENKPRQLDWTKAEFGEADILQIEAGGQHSAVLARAAE 514
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: A0A0P1AXU7_PLAHL (FOG: RCC1 domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AXU7_PLAHL) HSP 1 Score: 260 bits (665), Expect = 2.470e-79 Identity = 147/347 (42.36%), Postives = 205/347 (59.08%), Query Frame = 1
Query: 13 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREV-CSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEV----HLPSGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKR-------------GITKVLDADGGGQHSAIL 996
G + A I + GDC T + L+G+VY WGC++DKEGKQW A + K A K RP +I L ++AD++CG+SF L T G V SWG+GE+G+LGREV MK D + Y D + RDHL P + + + VKAIGCG +HSL A+ +Y+CGLN+YGQLG+G+TDN L LV+DL++ N V GG HS+VLT +G +++FGR DSGQLG + G F+ P +V H S + R V G+NH L +T+ +E+++WGYG+M ALG+G D D N P+++D +K G ++L + GGQHSA+L
Sbjct: 192 GPQDAIAIQVVGGDCHTAVVTLAGEVYTWGCYRDKEGKQWCDARSAK--DAFKRKQTRPFLIKALD-NIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGREVDAEMK-------DAKGDYKVDMVYRDHLQPKPVMLGKDP----LPVVKAIGCGSYHSLFAVSANGYLYSCGLNNYGQLGIGNTDNSSELQLVEDLSSKNVAFVDGGTHHSVVLTNDGDVYTFGRADSGQLG---VLESCCTGEFKDRPQKVTISSHNKSSSSVVRMVTSGSNHVLALTESNEIFSWGYGDMFALGNGVDRDENKPRQLDWSKAISGKDKEGKDQQFGKAEILLVEAGGQHSAVL 521
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: G4YWG2_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YWG2_PHYSP) HSP 1 Score: 260 bits (664), Expect = 3.570e-79 Identity = 143/345 (41.45%), Postives = 206/345 (59.71%), Query Frame = 1
Query: 13 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREV-CSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLP----SGAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTA-----------KRGITKVLDADGGGQHSAIL 996
G E AT + + GDC T + L+G+VY WGC++DKEGKQW AP+ K A K RP +I L ++AD+KCGN+F LA T G V SWG+GE+G+LGR+V MK D + Y + + ++HL P + +D ++ VK+IGCG +HS+ ++ +Y CGLN+YGQLG+G TDN L LV+DL+ N V GG HS+VLT +G +++FGR DSGQLG + D F+ P +V +P SG+ R + G+NH L +T+ +++WGYG+M LGHG D D N P++++ + K G ++L + GGQHSA+L
Sbjct: 195 GPEQATAVQIVGGDCHTAVVTLAGRVYMWGCYRDKEGKQWCDAPSAKA--AFKQKQTRPFLIKALD-NIADVKCGNAFNLARTNDGRVYSWGLGEMGQLGRKVDAEMK-------DADGEYKVEMVYKEHLQPK-LVMLGKD---QLPVVKSIGCGSYHSMFALSSNGYLYTCGLNNYGQLGIGSTDNCSELQLVEDLSFKNVAFVDGGEHHSVVLTNDGDVYTFGRADSGQLGMLDTCSTGD---FKDRPQKVTIPKPKNSGSNVVRMIATGSNHALALTESDAIFSWGYGDMLQLGHGLDQDENKPRQLNWSNATYGKEGKNKKFGEAEILQIEAGGQHSAVL 522
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: F0WVH1_9STRA (Regulator of chromosome condensation (RCC1)like protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WVH1_9STRA) HSP 1 Score: 258 bits (658), Expect = 2.860e-78 Identity = 143/333 (42.94%), Postives = 203/333 (60.96%), Query Frame = 1
Query: 16 LEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREV-CSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPSGAGSP--RKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAK--RGITKVLDADGGGQHSAIL 996
LE I +GDC T+AL SG+V+ WGC+KDKEGK W AP KA K P++I GL ++D++CG+ F LA T G V SWG+GE G+LGR+ +MK +E YD + HLTPA + E + +VK +GCG +HSL V + +YACGLN+YGQLG+G+T N LALV+DL A N M V GG HS VLT G +++FGR DSGQLG +++ G ++ P +V + A + + CG+NH + ++ +++++WGYG+M ALG+G+D D PKK+D++K G ++ A+ GGQHSA+L
Sbjct: 202 LEKHQAIQAVAGDCHTLALTSSGEVFTWGCYKDKEGKLWCDAP--NAGKAFKNKQTEPVLIHGLE-DISDVRCGSCFNLARTSCGTVFSWGLGEQGQLGRKADLNMK-------NEHDKYDTKLVFDQHLTPARVTLGTES----LSDVKTMGCGAYHSLFVVGGNGYLYACGLNNYGQLGIGNTCNSSDLALVEDLVAHNVMQVEGGTHHSAVLTVGGEVYTFGRGDSGQLGM---LDECTSGNYKDRPQKVVMDPKAKNTYITSISCGSNHAIALSKDNQVFSWGYGDMMALGNGRDEDELKPKKIDSSKFDSGGMNIIQAEAGGQHSALL 517
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: A0A0W8D136_PHYNI (Regulator of chromosome condensation n=8 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D136_PHYNI) HSP 1 Score: 256 bits (654), Expect = 1.070e-77 Identity = 143/346 (41.33%), Postives = 199/346 (57.51%), Query Frame = 1
Query: 13 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPS----GAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKR-------------GITKVLDADGGGQHSAIL 996
G + AT + + GDC T + L+GKVY WGC++DKEGKQW AP+ K A K P +I L ++AD++CG+SF L T G V SWG+GE+G+LGR V D + Y D + +HL P + G + VKAIGCG +HSL ++ +Y+CGLN+YGQLG+G T+N L LV+DL++ N V GG HS+VLT +G +++FGR DSGQLG N G F+ P +V +P G+ R V G+NH L +T+ + +++WGYG+M ALG+G D D N P +VD +K G + L + GGQHSA+L
Sbjct: 192 GPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAK--DAFKKKQPEPFLIKSLD-NIADVRCGSSFNLVRTNDGRVYSWGLGEMGQLGRIVDDKM------KDSKGDYKVDMVYTEHLQPKPVML----GNNPLPAVKAIGCGSYHSLFSLSSNGYLYSCGLNNYGQLGIGSTENCTELQLVEDLSSKNVAYVDGGAHHSVVLTNDGDVYTFGRADSGQLGTLETCNT---GEFKDRPQKVTIPKPKNGGSSEVRMVASGSNHALALTESNAIFSWGYGDMLALGNGVDRDENKPYQVDWSKAILGKDKEGEEEEFGKAEFLQVEAGGQHSAVL 521
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: D0N6R7_PHYIT (Regulator of chromosome condensation (RCC1)-like protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N6R7_PHYIT) HSP 1 Score: 256 bits (653), Expect = 1.470e-77 Identity = 143/351 (40.74%), Postives = 201/351 (57.26%), Query Frame = 1
Query: 13 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPS----GAGSPRKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKR-------------GITKVLDADGGGQHSAILGETAD 1011
G + AT + + GDC T + L+GKVY WGC++DKEGKQW AP+ K A K P +I L ++AD++CG+SF LA T G V SWG+GE+G+LGR V D + Y D + DHL P + G + VKAIGCG +HSL ++ +Y CGLN+YGQLG+G+T+N L LV+DL++ N V GG HS+VLT +G +++FGR DSGQLG + D F+ P +V +P G+ + G+NH L +T+ + +++WGYG+M ALG+G D D N P +VD +K G + L + GGQHSA+L + D
Sbjct: 192 GPQQATAVQVVGGDCHTAVVTLAGKVYTWGCYRDKEGKQWCDAPSAK--DAFKKKQTEPFLIKALD-NIADVRCGSSFNLARTNDGRVYSWGLGEMGQLGRTVDDQM------KDFKGDYKVDMVYNDHLQPKPVTL----GNDPLPVVKAIGCGSYHSLFALSSNGYLYTCGLNNYGQLGIGNTENCTELQLVEDLSSKNVAYVDGGSHHSVVLTIDGDVYTFGRADSGQLGMLETCSTGD---FKDRPQKVTIPKPKDGGSRQVCMISSGSNHTLALTESNAIFSWGYGDMLALGNGVDRDENKPYQVDWSKATNGKDKKGKKMVFGKAEFLQVEAGGQHSAVLARSTD 526
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Match: K3WZG0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZG0_GLOUD) HSP 1 Score: 254 bits (650), Expect = 4.320e-77 Identity = 145/337 (43.03%), Postives = 196/337 (58.16%), Query Frame = 1
Query: 13 GLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADKGSKACKGAAKRPIVISGLPPHVADIKCGNSFCLALTMAGEVLSWGIGEIGELGREVCSMKVPPVPGSDEEPPYDFDGIQRDHLTPAGMYRAAEDGGARMENVKAIGCGDFHSLVVTRADADVYACGLNSYGQLGLGDTDNRKRLALVQDLAALNTMAVAGGGMHSLVLTTEG-LFSFGRKDSGQLGCTAAINKDDWGAFETSPMEVHLPSGAGSP---RKVECGTNHCLVITDKHELYTWGYGEMGALGHGKDVDCNLPKKVDTAKR--GITKVLDADGGGQHSAILGET 1005
G A + + GDC T + L+G+VY WG +KDKEGKQW A S + K RP +I G+ + D++CG+SF + T G V SWG+GE+G+LGREV + G Y D + DHLTPA M E + VKAIGCG +HSLV A+ +Y GLN+YGQLG+G T+N+ +L LV DLA N +V GG HS+VLT +G +++FGR DSGQLG D F+ P +V GA R + G+NH LV+T+++ +Y+WGYG+M ALG+G + D P+ VD K G ++L D GGQHSA+L T
Sbjct: 203 GPAAACAVQIVGGDCHTAVVTLTGQVYTWGSYKDKEGKQWCDAATP--SASFKQKQVRPFLIKGVN-NAVDVRCGSSFNVVRTNEGHVYSWGLGEMGQLGREVNAEMKDATTGD-----YLVDMVFHDHLTPARMMLGKEP----LPAVKAIGCGSYHSLVALAANGYLYTTGLNNYGQLGIGSTENQVKLQLVDDLATKNIASVEGGTHHSVVLTNDGDVYTFGRADSGQLGAQDTCQTGD---FKDRPQKVEF-LGAKEKIVVRAIAAGSNHALVLTEQNAIYSWGYGDMLALGNGVEQDETRPRLVDWRKTSFGNAEILQIDAGGQHSAVLART 523 The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig6026.16645.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6026.16645.1 >prot_Ecto-sp13_S_contig6026.16645.1 ID=prot_Ecto-sp13_S_contig6026.16645.1|Name=mRNA_Ecto-sp13_S_contig6026.16645.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=339bp KVKEGLEGATIIGLASGDCQTIALDLSGKVYGWGCFKDKEGKQWFQAPADback to top mRNA from alignment at Ecto-sp13_S_contig6026:513..8396+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_Ecto-sp13_S_contig6026.16645.1 ID=mRNA_Ecto-sp13_S_contig6026.16645.1|Name=mRNA_Ecto-sp13_S_contig6026.16645.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=7884bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6026:513..8396+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top Coding sequence (CDS) from alignment at Ecto-sp13_S_contig6026:513..8396+ >mRNA_Ecto-sp13_S_contig6026.16645.1 ID=mRNA_Ecto-sp13_S_contig6026.16645.1|Name=mRNA_Ecto-sp13_S_contig6026.16645.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=1017bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6026:513..8396+ (Ectocarpus species13 EcNAP12_S_4_19m)back to top |