prot_Ecto-sp13_S_contig60257.16644.1 (polypeptide) Ectocarpus species13 EcNAP12_S_4_19m

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp13_S_contig60257.16644.1
Unique Nameprot_Ecto-sp13_S_contig60257.16644.1
Typepolypeptide
OrganismEctocarpus species13 EcNAP12_S_4_19m (Ectocarpus species13 EcNAP12_S_4_19m)
Sequence length86
Homology
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: D7FX60_ECTSI (WD40 repeat-containing protein SMU1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX60_ECTSI)

HSP 1 Score: 158 bits (400), Expect = 2.260e-44
Identity = 82/85 (96.47%), Postives = 83/85 (97.65%), Query Frame = 0
Query:    2 QVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            +VSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFG K SHPEVARFSPDGQYLASGSV
Sbjct:  153 EVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGTK-SHPEVARFSPDGQYLASGSV 236          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: A0A446NF76_TRITD (Uncharacterized protein n=1 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446NF76_TRITD)

HSP 1 Score: 106 bits (264), Expect = 4.700e-27
Identity = 58/86 (67.44%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            ++VSVVPP+RL+AL+ QALKWQQ QGLLP G +FDLFRG A A K+D EE  P  ++ QIKFG+K +HPE ARFSPDGQYL S SV
Sbjct:    6 SEVSVVPPARLMALITQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEEAYPTTLSHQIKFGKK-THPECARFSPDGQYLVSCSV 89          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: A0A804N302_MAIZE (LisH domain-containing protein n=1 Tax=Zea mays TaxID=4577 RepID=A0A804N302_MAIZE)

HSP 1 Score: 107 bits (268), Expect = 1.700e-26
Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            ++VSVVPPSRL+AL+ QALKWQQ QGLLP G +FDLFRG A A K+D EE  P  ++ QIKFG+K +HPE ARFSPDGQYL S SV
Sbjct:  128 SEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEETYPTSLSHQIKFGKK-THPECARFSPDGQYLVSCSV 211          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: A0A1D6MS79_MAIZE (Suppressor of mec-8 and unc-52 protein homolog 1 n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6MS79_MAIZE)

HSP 1 Score: 107 bits (268), Expect = 1.950e-26
Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            ++VSVVPPSRL+AL+ QALKWQQ QGLLP G +FDLFRG A A K+D EE  P  ++ QIKFG+K +HPE ARFSPDGQYL S SV
Sbjct:  155 SEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEETYPTSLSHQIKFGKK-THPECARFSPDGQYLVSCSV 238          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: A0A453ESF9_AEGTS (Uncharacterized protein n=2 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453ESF9_AEGTS)

HSP 1 Score: 106 bits (264), Expect = 2.210e-26
Identity = 58/86 (67.44%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            ++VSVVPP+RL+AL+ QALKWQQ QGLLP G +FDLFRG A A K+D EE  P  ++ QIKFG+K +HPE ARFSPDGQYL S SV
Sbjct:  155 SEVSVVPPARLMALITQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEEAYPTTLSHQIKFGKK-THPECARFSPDGQYLVSCSV 238          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: K8YWD5_NANGC (WD40 repeat-containing protein SMU1 (Fragment) n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YWD5_NANGC)

HSP 1 Score: 110 bits (274), Expect = 2.830e-26
Identity = 55/85 (64.71%), Postives = 71/85 (83.53%), Query Frame = 0
Query:    2 QVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            +VSVVPPSRLLAL+ QAL++QQ+QG LP+ +++DLFRG AR++ KD  E+PP+K AGQIKFG K +HPE ARFSPDG  L +GS+
Sbjct:  211 EVSVVPPSRLLALLQQALRYQQLQGNLPKDRRYDLFRGSARSAGKDEAERPPKKQAGQIKFGSK-THPECARFSPDGLQLVTGSL 294          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: A0A804N305_MAIZE (WD40 repeat-containing protein SMU1 n=3 Tax=Poaceae TaxID=4479 RepID=A0A804N305_MAIZE)

HSP 1 Score: 107 bits (268), Expect = 6.690e-26
Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            ++VSVVPPSRL+AL+ QALKWQQ QGLLP G +FDLFRG A A K+D EE  P  ++ QIKFG+K +HPE ARFSPDGQYL S SV
Sbjct:  155 SEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEETYPTSLSHQIKFGKK-THPECARFSPDGQYLVSCSV 238          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: A0A7R8XD53_9CRUS (WD40 repeat-containing protein SMU1 n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R8XD53_9CRUS)

HSP 1 Score: 108 bits (270), Expect = 1.030e-25
Identity = 61/85 (71.76%), Postives = 68/85 (80.00%), Query Frame = 0
Query:    2 QVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            +VSVVPPSRLLAL+ QALKWQQ QGLLP G   DLFRG A A ++  EEK P +M+ QIKFG K SHPEVARFSPDGQYL +GSV
Sbjct:  223 EVSVVPPSRLLALLGQALKWQQHQGLLPPGTTIDLFRGKA-AIREQEEEKCPTQMSRQIKFGTK-SHPEVARFSPDGQYLITGSV 305          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: K3XHY1_SETIT (WD40 repeat-containing protein SMU1 n=1 Tax=Setaria italica TaxID=4555 RepID=K3XHY1_SETIT)

HSP 1 Score: 107 bits (267), Expect = 1.240e-25
Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            ++VSVVPPSRL+AL+ QALKWQQ QGLLP G +FDLFRG A A K+D EE  P  ++ QIKFG+K +HPE ARFSPDGQYL S SV
Sbjct:  155 SEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEETYPTTLSHQIKFGKK-THPECARFSPDGQYLVSCSV 238          
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Match: A0A1E5WM66_9POAL (Suppressor of mec-8 and unc-52 protein-like protein 1 n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5WM66_9POAL)

HSP 1 Score: 106 bits (265), Expect = 1.260e-25
Identity = 59/86 (68.60%), Postives = 69/86 (80.23%), Query Frame = 0
Query:    1 TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEEKPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV 86
            ++VSVVPPSRL+AL+ QALKWQQ QGLLP G +FDLFRG A A K+D EE  P  ++ QIKFG+K +HPE ARFSPDGQYL S SV
Sbjct:  155 SEVSVVPPSRLMALIGQALKWQQHQGLLPPGTQFDLFRGTA-AMKQDEEETYPITLSHQIKFGKK-THPECARFSPDGQYLVSCSV 238          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp13_S_contig60257.16644.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX60_ECTSI2.260e-4496.47WD40 repeat-containing protein SMU1 n=2 Tax=Ectoca... [more]
A0A446NF76_TRITD4.700e-2767.44Uncharacterized protein n=1 Tax=Triticum turgidum ... [more]
A0A804N302_MAIZE1.700e-2668.60LisH domain-containing protein n=1 Tax=Zea mays Ta... [more]
A0A1D6MS79_MAIZE1.950e-2668.60Suppressor of mec-8 and unc-52 protein homolog 1 n... [more]
A0A453ESF9_AEGTS2.210e-2667.44Uncharacterized protein n=2 Tax=Aegilops tauschii ... [more]
K8YWD5_NANGC2.830e-2664.71WD40 repeat-containing protein SMU1 (Fragment) n=3... [more]
A0A804N305_MAIZE6.690e-2668.60WD40 repeat-containing protein SMU1 n=3 Tax=Poacea... [more]
A0A7R8XD53_9CRUS1.030e-2571.76WD40 repeat-containing protein SMU1 n=1 Tax=Darwin... [more]
K3XHY1_SETIT1.240e-2568.60WD40 repeat-containing protein SMU1 n=1 Tax=Setari... [more]
A0A1E5WM66_9POAL1.260e-2568.60Suppressor of mec-8 and unc-52 protein-like protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR22848WD40 REPEAT PROTEINcoord: 2..86
NoneNo IPR availablePANTHERPTHR22848:SF2WD40 REPEAT-CONTAINING PROTEIN SMU1coord: 2..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp13_S_contig60257contigEcto-sp13_S_contig60257:9..829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ectocarpus species13 EcNAP12_S_4_19m OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp13_S_contig60257.16644.1mRNA_Ecto-sp13_S_contig60257.16644.1Ectocarpus species13 EcNAP12_S_4_19mmRNAEcto-sp13_S_contig60257 9..829 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp13_S_contig60257.16644.1 ID=prot_Ecto-sp13_S_contig60257.16644.1|Name=mRNA_Ecto-sp13_S_contig60257.16644.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=86bp
TQVSVVPPSRLLALVNQALKWQQVQGLLPRGQKFDLFRGGARASKKDMEE
KPPRKMAGQIKFGEKGSHPEVARFSPDGQYLASGSV
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