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Homology
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: D7FVV0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVV0_ECTSI) HSP 1 Score: 1487 bits (3850), Expect = 0.000e+0 Identity = 907/1149 (78.94%), Postives = 931/1149 (81.03%), Query Frame = 1
Query: 1 NPQRRQSREGYAIFLHFFSHFSAAFSALNAR*EASYQMTSTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD---NREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATPHVRRNISLSHKVLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITRRSSXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELPGGTGVSGSGAGGVATIRTKKSARSPKTATRAAETKEDSGDGRGSADNVVLPDWVDKSYGVLVLGFHELLDHVARVHLGLAVAAAPSEENKGDSGKTGDGRTNTDDSSSSAVGETRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAALLSQGQPSSEAPSLGKGSDGVDMPSSSRTDSTTDSRTSVHLPEVTEYQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVLAAAADKLGACLTFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRGQTKERIQLDLSRTAVRGSSRGGSNGSNASLGFDDDDDAGRSNVTKDKPRISKARGNGAQGRDKGKGHRGDEKQGSGAKKNASSHAPLHRNGSFDPSAIAENAGQAGASMSEFTRTRTRGRNASNALARTGSAAVLAEATTASKKLGVKNTKRKLSAATKRQASVRSTGKDDSEDTESQTEGSSEQISSNDGGPNEQRHDQKTRRRSRGRGTSESYLSNRGIGEGGEKSGARSKGERXXXXXXRASAAASSDLSEDEGSMTIDGQSGNKGGRSPTISTSVSKVCVSDRGKDKKKQDGKGKQLASADDGGEKVIRRSEKAKAEKKTSSSRRTLSRSHERSSQRDGDTRRETKQGTAKTQGTKSQRHASRGVKSRGSSGASSADDGREGSAETKAAPPTAAVSPIRRLFGGFGGLKKKA 3438
NPQRRQSR ++ LH FS FSAA SALN R EASYQM STASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD NREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPS+ RLDIWRLLLKHTA VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKAT NIPE F+HFLVPLCAVIT RSS XXXXXXXXXXXXXXXXXXSLREQEID+MIERLVEMFEGALEAGLEGLVD KELPGGTGVSGSGAGGV+T R KKSARSPKTATRAAETKE+SGDGRG ADN+VLPDWVDKSYGVLV GF LLDHV RVHLGLAVAA PSE NKGD+GKTGDGR NT D SSSAVGET A RRAALLSQGQPSSEAPSL LPEVTE QARVALWALLEPLVT+GLVGHLGADACLFAWDQAVIAGF VMLPRVAAMV+AAAADKLGACLTFAVMSEAL SH HLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEI GPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHR QTKERIQLDLSRTAVRGSSRG SN SNASLGFDDDDDAGRSN TKD+PR SKARGNGAQGRDKGK RGDEKQ SGAKKN SS+AP HRNGS PSA AENAG+AGAS S+FTRTRTRGRNASNALART S AV AEA TASKK GVKNTK+KLSAATKRQASVRST KDD+EDT GR TSESY SNRG GEGGEKS ARSKGERXXXXXX SSDLSEDEGSMT+DGQSGNKGG SPT+ST V+KV SDRGKDKKKQDGKG QLASADDGGEKVIRRSE+AKA+ KTSSSRRTLSRSHERSSQRDGD RRETKQGTAK QGTKSQRHASRGVK+RGSSGA SADD + SAETKAAPPTAAVSPIRRLFGGFGGLKKKA
Sbjct: 2 NPQRRQSR-ARSVVLHLFSQFSAAPSALNVREEASYQMASTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDSTANREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSRARLDIWRLLLKHTA-------------------------------------------VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATTNIPEPFVHFLVPLCAVITGRSSYSXXXXXXXXXXXXXXXXXXSLREQEIDIMIERLVEMFEGALEAGLEGLVDQKELPGGTGVSGSGAGGVSTTRAKKSARSPKTATRAAETKENSGDGRGGADNIVLPDWVDKSYGVLVPGFRGLLDHVTRVHLGLAVAAVPSEGNKGDNGKTGDGRINTADGSSSAVGETGASNAATDGQQQQPQENQQRGQDSATQPTSPRRTSSATSRRAALLSQGQPSSEAPSLXXXXXXXXXXXXXXXXXXXXXXXXXXLPEVTESQARVALWALLEPLVTVGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLGACLTFAVMSEALFSHAHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEITGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLSRTAVRGSSRGSSNDSNASLGFDDDDDAGRSNGTKDEPRASKARGNGAQGRDKGKAPRGDEKQSSGAKKNTSSNAPPHRNGSSGPSATAENAGKAGASKSDFTRTRTRGRNASNALARTSSTAVEAEAATASKKPGVKNTKQKLSAATKRQASVRSTRKDDNEDTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDTSESYSSNRGNGEGGEKSAARSKGERXXXXXXXXXXXESSDLSEDEGSMTVDGQSGNKGGSSPTMSTPVAKVHASDRGKDKKKQDGKGTQLASADDGGEKVIRRSERAKADNKTSSSRRTLSRSHERSSQRDGDRRRETKQGTAKAQGTKSQRHASRGVKTRGSSGAPSADDDSDRSAETKAAPPTAAVSPIRRLFGGFGGLKKKA 1106
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: A0A6H5KX11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX11_9PHAE) HSP 1 Score: 1355 bits (3507), Expect = 0.000e+0 Identity = 870/1080 (80.56%), Postives = 897/1080 (83.06%), Query Frame = 1
Query: 16 QSREGYAIFLHFFSHFSAAFSALNAR*EASYQMTSTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD---NREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATPHVRRNISLSHKVLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITRRSSXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELPGGTGVSGSGAGGVATIRTKKSARSPKTATRAAETKEDSGDGRGSADNVVLPDWVDKSYGVLVLGFHELLDHVARVHLGLAVAAAPSEENKGDSGKTGDGRTNTDDSSSSAVGETRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRAALLSQGQPSSEAPSLGKGSDGVDMPSSSRTDSTTDSRTSVHLPEVTEYQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVLAAAADKLGACLTFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRGQTKERIQLDLSRTAVRGSSRGGSNGSNASLGFDDDDDAGRSNVTKDKPRISKARGNGAQGRDKGKGHRGDEKQGSGAKKNASSHAPLHRNGSFDPSAIAENAGQAGASMSEFTRTRTRGRNASNALARTGSAAVLAEATTASKKLGVKNTKRKLSAATKRQASVRSTGKDDSEDTESQTEGSSEQISSNDGGPNEQRHDQKTRRRSRGRGTSESYLSNRGIGEGGEKSGARSKGERXXXXXXRASAAASSDLSEDEGSMTIDGQSGNKGGRSPTISTSVSKVCVSDRGKDKKKQDGKGKQLASADDGGEKVIRRSEKAKAEKKTSSSRRTLSRSHERSSQRDGDTRRETKQG 3246
+SR YAIFL FS FSAA SALN R EASYQM TAS MGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQD NREGTEEAQYLD ILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSK RLDIWRLLLKHTA VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVIT +S XXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKEL G T ETKE+SGDGRG ADN+VLPDWV+KSYGVLV GF LLDHVARVHLGL VAAAPSE NKGD+GKTGDGR NT DSSSSAVGE+ A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AALL QGQPSSEAPSLGKG+DGVDMPSSSRT LPEVTE QARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGF VMLPRVAAMV+AAAADKL ACLTFAVMSEAL+SH HLVST QLQELMEAHCMP IRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHR QTKERIQLDLSRTAVRGSSRG SN SNASLGFDDD RSN TKDKPR SKARGNGAQGR+KG R DE Q SGAKKN SS+AP HRNGS P+AIAEN G+AGAS SEFTR ASNALART SAAV AEATTASKKL VKNTK++LSAATK QA VRSTGKDD+ED ESQTEGSS+QISSNDGG +EQRHDQK+RRRSRGRGTSESY N EKS RSKGER RASAA SS+LSEDE SMT+DGQSGNKGGRSPT+STSV KV VSDRGKDKKKQDGKGKQLA ADDGGEKVI+ SE+AKA+ KTSSSRRT+SRSHERSSQRDG TRRET QG
Sbjct: 78 RSRARYAIFLPLFSQFSAALSALNVREEASYQMIPTASGMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDSAANREGTEEAQYLDHILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKARLDIWRLLLKHTA-------------------------------------------VLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKATANIPESFLHFLVPLCAVITTKSXXXXXXXXXXXXXXXXXXXXXSLREQEIDVMIERLVEMFEGALEAGLEGLVDPKELSGVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETKENSGDGRGGADNIVLPDWVNKSYGVLVPGFRGLLDHVARVHLGLTVAAAPSEGNKGDNGKTGDGRVNTADSSSSAVGESGASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAALLPQGQPSSEAPSLGKGADGVDMPSSSRTXXXXXXXXXAPLPEVTESQARVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFGVMLPRVAAMVVAAAADKLEACLTFAVMSEALLSHAHLVSTPQLQELMEAHCMPLIRKEMRVSHKLCPEIIGPTLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRSQTKERIQLDLSRTAVRGSSRGSSNDSNASLGFDDDXXX-RSNDTKDKPRASKARGNGAQGREKGTRQRRDESQSSGAKKNMSSNAPPHRNGSPGPNAIAENDGKAGASRSEFTRXXXXXXXASNALARTSSAAVEAEATTASKKLDVKNTKKELSAATKWQARVRSTGKDDNEDYESQTEGSSQQISSNDGGHSEQRHDQKSRRRSRGRGTSESYSLNXXXXXXSEKSAVRSKGERRNSRSRRASAAESSNLSEDERSMTVDGQSGNKGGRSPTMSTSVVKVRVSDRGKDKKKQDGKGKQLAPADDGGEKVIQLSERAKADNKTSSSRRTVSRSHERSSQRDGYTRRETNQG 1113
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: UPI001EE520DF (uncharacterized protein LOC124253527 n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EE520DF) HSP 1 Score: 86.7 bits (213), Expect = 1.610e-13 Identity = 68/243 (27.98%), Postives = 114/243 (46.91%), Query Frame = 1
Query: 151 PAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGLGHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEARARVVQDNREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQAVPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATPHVRRNISLSHKVLLE-SGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKRGQKAT 876
P W+++ +E+I +S W +L + + L + +F+DLS E+ +E A + I E V+ A + S D + ++ +++ D T+ D ++DSA EGA+SLLR P E L + NQ +P R WRL L + R+EY ++ ++ + IS D+ I+ +C+ + S + GSV + MK VLSYHHA + T + + T
Sbjct: 7 PKWLLDCKEDITKSKEWNAFLHELHDAIQQQLTESHVQYFTDLSEAEKELFMERATKAI--EGGSVFAALSRKVSSMTDQHLNEDVAKQLMDDFPLSTKS----DLVIDSAEEGALSLLRRWP-EMKAKLHVCFNQPLPEAIRQLAWRLYLNNPKLRKEYIDILNRDPRAAISPDDLEISQKCE-------QLLASESTFADIQGSVGA----------FYAMKAVLSYHHARQKTHKRLQDT 225
BLAST of mRNA_Ecto-sp13_S_contig6024.16641.1 vs. uniprot
Match: A0A7S1C4T7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C4T7_9STRA) HSP 1 Score: 57.4 bits (137), Expect = 4.530e-5 Identity = 51/148 (34.46%), Postives = 65/148 (43.92%), Query Frame = 1
Query: 1708 PEVTEYQA------RVALWALLEPLVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVL-AAAADKLGACLTFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGPTLKTATD--ILDSAYSKRTREAQ 2124
P+ TE+ VAL AL P LVG L DA LFAWDQ V+ GFDV +PRV A VL + L A VM H V +L+ M A MP +R+ + V + P D + D + T+E Q
Sbjct: 63 PQPTEWDVVPNPDTEVALAALFAPHFNRALVGTLPMDALLFAWDQCVMVGFDVAVPRVLACVLHLLRREVLDATSVEGVMRVFKERAPH-VPADELRGAMHALFMPGLRRRLGVDVAAYVADVAPPFPAPLDKFLADPPPEQTTQETQ 209
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Stop | 1 |
| Start | 1 |
| Seed ortholog score | 97.8 |
| Seed ortholog evalue | 3.3e-17 |
| Seed eggNOG ortholog | 157072.XP_008877317.1 |
| Model size | 3441 |
| Hectar predicted targeting category | other localisation |
| Exons | 9 |
| EggNOG OGs | 2CN9E@1,2QUN2@2759 |
| Ec32 ortholog description | conserved unknown protein |
| Ec32 ortholog | Ec-01_002240.1 |
| Cds size | 3330 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681463838.867321-UTR-Ecto-sp13_S_contig6024:1052..1163 | 1681463838.867321-UTR-Ecto-sp13_S_contig6024:1052..1163 | Ectocarpus species13 EcNAP12_S_4_19m | UTR | Ecto-sp13_S_contig6024 1053..1163 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1681463838.8822587-CDS-Ecto-sp13_S_contig6024:1163..1256 | 1681463838.8822587-CDS-Ecto-sp13_S_contig6024:1163..1256 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 1164..1256 + |
| 1681463838.8958578-CDS-Ecto-sp13_S_contig6024:1601..1742 | 1681463838.8958578-CDS-Ecto-sp13_S_contig6024:1601..1742 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 1602..1742 + |
| 1681463838.9065487-CDS-Ecto-sp13_S_contig6024:2029..2094 | 1681463838.9065487-CDS-Ecto-sp13_S_contig6024:2029..2094 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 2030..2094 + |
| 1681463838.9176667-CDS-Ecto-sp13_S_contig6024:2585..2790 | 1681463838.9176667-CDS-Ecto-sp13_S_contig6024:2585..2790 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 2586..2790 + |
| 1681463838.9290376-CDS-Ecto-sp13_S_contig6024:3180..3271 | 1681463838.9290376-CDS-Ecto-sp13_S_contig6024:3180..3271 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 3181..3271 + |
| 1681463838.942176-CDS-Ecto-sp13_S_contig6024:3746..5002 | 1681463838.942176-CDS-Ecto-sp13_S_contig6024:3746..5002 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 3747..5002 + |
| 1681463838.9535203-CDS-Ecto-sp13_S_contig6024:5304..5469 | 1681463838.9535203-CDS-Ecto-sp13_S_contig6024:5304..5469 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 5305..5469 + |
| 1681463838.9645278-CDS-Ecto-sp13_S_contig6024:5779..6895 | 1681463838.9645278-CDS-Ecto-sp13_S_contig6024:5779..6895 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 5780..6895 + |
| 1681463838.9757388-CDS-Ecto-sp13_S_contig6024:7135..7333 | 1681463838.9757388-CDS-Ecto-sp13_S_contig6024:7135..7333 | Ectocarpus species13 EcNAP12_S_4_19m | CDS | Ecto-sp13_S_contig6024 7136..7333 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_Ecto-sp13_S_contig6024.16641.1 >prot_Ecto-sp13_S_contig6024.16641.1 ID=prot_Ecto-sp13_S_contig6024.16641.1|Name=mRNA_Ecto-sp13_S_contig6024.16641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=polypeptide|length=1110bp
MTSTASSMGAVGTPAWVVNVREEIGRSPAWEVLSDQLFERVSTVLKSHGL GHFSDLSSPEQITLLEEAHRDIMSENNKVYQAFESQFSKSMDAEIAKEAR ARVVQDNREGTEEAQYLDRILDSAAEGAVSLLRELPREHLGSLRLMLNQA VPSKTRLDIWRLLLKHTAAREEYELLVRQNRNSTISGQDIYITHRCQATP HVRRNISLSHKVLLESGSVASRRILPLSSRNVVLMKTVLSYHHACKMTKR GQKATANIPESFLHFLVPLCAVITRRSSYSSSSSSSSASATTTTAAASSL REQEIDVMIERLVEMFEGALEAGLEGLVDPKELPGGTGVSGSGAGGVATI RTKKSARSPKTATRAAETKEDSGDGRGSADNVVLPDWVDKSYGVLVLGFH ELLDHVARVHLGLAVAAAPSEENKGDSGKTGDGRTNTDDSSSSAVGETRA SNAATDEQQHQPQENQQQGQDRATQPPSPRRTSAATSRRAALLSQGQPSS EAPSLGKGSDGVDMPSSSRTDSTTDSRTSVHLPEVTEYQARVALWALLEP LVTMGLVGHLGADACLFAWDQAVIAGFDVMLPRVAAMVLAAAADKLGACL TFAVMSEALISHTHLVSTSQLQELMEAHCMPSIRKEMRVSHKLCPEIIGP TLKTATDILDSAYSKRTREAQEARKAHVEHTLGPSRGGSVHRGQTKERIQ LDLSRTAVRGSSRGGSNGSNASLGFDDDDDAGRSNVTKDKPRISKARGNG AQGRDKGKGHRGDEKQGSGAKKNASSHAPLHRNGSFDPSAIAENAGQAGA SMSEFTRTRTRGRNASNALARTGSAAVLAEATTASKKLGVKNTKRKLSAA TKRQASVRSTGKDDSEDTESQTEGSSEQISSNDGGPNEQRHDQKTRRRSR GRGTSESYLSNRGIGEGGEKSGARSKGERRNSRSRRASAAASSDLSEDEG SMTIDGQSGNKGGRSPTISTSVSKVCVSDRGKDKKKQDGKGKQLASADDG GEKVIRRSEKAKAEKKTSSSRRTLSRSHERSSQRDGDTRRETKQGTAKTQ GTKSQRHASRGVKSRGSSGASSADDGREGSAETKAAPPTAAVSPIRRLFG GFGGLKKKA* back to topmRNA from alignment at Ecto-sp13_S_contig6024:1053..7333+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_Ecto-sp13_S_contig6024.16641.1 ID=mRNA_Ecto-sp13_S_contig6024.16641.1|Name=mRNA_Ecto-sp13_S_contig6024.16641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=mRNA|length=6281bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6024:1053..7333+ (Ectocarpus species13 EcNAP12_S_4_19m) AACCCCCAAAGACGACAGTCCCGCGAGGGGTATGCAATCTTCCTCCATTT
TTTCTCGCATTTCTCGGCGGCGTTCAGCGCCCTGAACGCCCGCTAGGAGG
CCTCGTACCAGATGACATCGACAGCCTCTAGCATGGGCGCTGTCGGTACG
CCGGCTTGGGTCGTTAACGTCAGAGAGGAGATCGGTCGTTCGCCGGCGTG
GGAGGTGCGCGGTGAAACCTGTCTCTTTTGGATACTGCTGTCGAAGGTCG
GAACGAAAGATCCTGTACCCTGAGAAAGCGCAGCAGACTTGGATGCGGTA
TGCACATGTCTTTCATCGGCACTCCAATACTCAAAGGCGGTGCTGTGCTG
ACTTGTCCAACTGGACGCGACTGCCGGCGAATCTGCAACAAGAACGCAAG
TTTTGGCGCTGAGATAAAACATGTTTAGGGTTTGTCGGAGGCGGCGGTAT
GGTATCTACAGTACATGTAGACTACATTCTACTGCTGTCATCAGACACAC
GCACCGCTCCTCTACCTGTTAGCGCGCACCGTTTTTCAATGTAAAACAGG
TCCTTTCTGATCAGCTATTTGAGCGGGTGTCTACCGTGCTCAAGTCGCAT
GGCTTGGGACATTTTTCGGACCTGTCTTCGCCGGAGCAGATCACACTTCT
TGAAGAAGCGCACCGCGACATCATGTCCGAGAACAACAAAGTGAGCTGCC
GGAAATAGTGTGGTTTACGCATTCCATCACGCGCATATCTGCGTCGCCCT
AAACCAGGATGTGGTGCTTTTGAGGGTAACTTTTCAGCCGTATGATACCA
GCCACCCCTATGGCCTTGTTCCTTTGAAGCCTAGTCTAAACGGTTAGGTT
CGATTAAGAATTGACAAGGATCGGGACACTTTTTACCGTACATGCCATTG
AGGTCAGCCCTACCTAATAGAGTCCAGAGGGGTGACTCCGGATCCTTGAT
CTGGACAGCTCTGTTCGCTCTACGCAGGTGTATCAGGCATTCGAGTCGCA
GTTCAGCAAGTCCATGGACGCAGAGATCGCTAAGGAAGCCAGGTACGACC
AGAGACAGCCCGAGTGGAGTGCCGAGTTGGCTGTCGAATGCAGCTTTGTT
CGGAGCGAAGTTCAAGCATTGTGTACCACATGGAGGCAAACGCTCCCTTG
ATCAGAATGGTGTCAGATTTTCGCCTGAACCTTTTTAAACGACTGCCTTA
GGGCATCCCGAAACATCCCGCGCCACCGCGTCACGAGCACCAACTTACCC
CATAGTACTGCCAGTTCCGAGGAGGAGATCGTACTGAGAAAATACCGCCC
AGCTTACATGCGTCTCCCTCAGAAATGCACTGACGCACAGACATGGTCGA
ACACCTAGTTGGAAGCACACGCGTAGATGTCGGTGTGTATCGGCTTTCAA
ATGTGTACACACCTAGTTCCCAAATGTGTACATAAAGTCTACATATAAGT
GCCACACATTTTCTGCACACAGCGCTCGCTCTGCCAGCAACCACACAAAC
ACCGTCAACTTCATACCCTACGCCGACTCGCAGAGCGAGAGTTGTCCAGG
ACAATCGCGAAGGCACCGAGGAAGCCCAGTACCTCGATCGCATCCTAGAC
TCGGCGGCTGAAGGGGCGGTGTCCCTGCTGAGAGAGCTCCCCCGGGAACA
CCTAGGAAGCCTGCGCCTGATGCTCAACCAAGCGGTCCCGTCAAAGACGA
GGCTGGACATCTGGCGTCTGCTCCTGAAGCACACGGCGGTGAGTTGTGCC
AGCGCAAAGGATTTCGTTTACGAGGTTTCCTTCCCCACACCGGGGCGGAT
GGTCTGGCAGTCGAGGGTTATTGGCACCTGGCCAGGTAGCGGTTGAAATA
TGTCCTGTCTTGAATGCATTTCTGAAATCTCTTCTGTGGTCAAGCCAAGC
GCGCTGTTTCCGGGGTATGCCGCAGTTCTGGTGTAGACGAACTCCCGGTA
AGCCTCGTCCTCTAAAAACGCCCACTCGTTTGGTCATGGAATGGAGCTGA
ATCGTCTCTCTAGGCCGAGTGGTGCCCGTGTGAAATCGGTGCGAGCTTTA
CGTCGAGCCTTTTCCTCAACTGTAGGCTAGTAGCCCCGTGAAGCTCACAG
CGATCAGGCCCGCATTTGACGAATGCAGGCGCGGGAAGAGTACGAGCTGC
TGGTGAGGCAGAACCGAAACAGCACCATATCGGGGCAGGACATCTACATC
ACTCACCGCTGCCAGGCAAGTGGTCGCACGAGATTCTTGACATCATCGAC
GAGGCCATTGGTCGTCACGCCGTAGATATGAAGGGGCCTCCACACGATTG
GCAGTGATATTTTCAAAGGAACACTCTCCAAGCTTATGATGTCATGTCGC
AAAAACTCCACGGTATCATCCGGCTTCCCAGCTTGACTTCTACAAAACCA
CGTATTAGCCCAACATAATGTCACAAGGCAAGAGACACGAGACAACACGA
ACAAAGTGAGGACGTTTAAAATTGTGCGCTCTAAGCGGTGGTCCCCCATT
GCTTGCCGAGTAAGGGGCGTGCCAAAGAAAACGATAAGGGACAGCGCCAA
GCATGCCCATCACGCGCCCCGCGGCTGTGCTTCATACCGTACGTTTCCCA
CGCCCCTCCGAAAGACGTTTCCACATGTCGGTCACCTCCACTGTACATCT
CGCAACGTTACGACCTCAATCAGTTCTCATGAACATCTTGGAAGCACCGC
ACGTGCGCCGAAACATTTCTCTGTCGCACAAGGTCCTCCTCGAGTCTGGG
AGCGTCGCTTCGCGCCGCATCCTCCCTCTCTCAAGCCGCAATGTGGTGCT
CATGAAGACGGTGCTCAGCTACCACCACGCGTGCAAGATGACCAAGCGGG
GACAGAAGGCCACGGCCAACATCCCTGAGTCCTTCTTGCACTTCCTGGTA
CCGTTGTGCGCCGTCATCACGAGACGATCGTCGTACTCCTCCTCCTCCAG
CAGCTCCAGCGCATCAGCAACGACCACAACAGCAGCAGCGTCGAGCCTGA
GAGAGCAAGAGATCGATGTAATGATCGAGAGGTTGGTTGAGATGTTCGAG
GGCGCCTTGGAGGCGGGGCTGGAAGGCTTGGTTGACCCGAAAGAGTTACC
GGGCGGCACCGGGGTGTCAGGCAGTGGCGCTGGAGGCGTCGCAACAATTC
GAACCAAGAAATCAGCGAGGTCGCCCAAGACAGCGACCCGTGCTGCGGAA
ACCAAGGAGGACAGCGGGGACGGGCGTGGCAGCGCGGACAACGTTGTCCT
CCCCGACTGGGTCGACAAAAGCTACGGCGTGCTTGTGCTGGGGTTCCATG
AACTGCTCGATCACGTGGCTCGCGTTCACCTGGGGCTGGCCGTAGCAGCA
GCTCCATCGGAGGAAAACAAAGGTGACAGCGGTAAGACGGGGGACGGTCG
AACAAACACCGACGATAGTAGTTCTTCCGCCGTCGGGGAAACCAGAGCCT
CGAATGCTGCGACCGATGAGCAGCAGCATCAACCGCAGGAAAACCAGCAA
CAAGGACAGGACAGGGCGACACAGCCACCATCGCCCCGGCGGACCAGCGC
AGCAACAAGTCGACGCGCAGCGCTCCTGTCGCAAGGCCAACCGAGTTCCG
AGGCGCCGTCACTGGGGAAAGGTTCAGATGGTGTCGATATGCCATCCTCC
AGCCGGACCGACTCCACCACAGACAGCCGCACCTCCGTCCACCTGCCCGA
AGTCACCGAGTACCAAGCGCGCGTTGCGTTGTGGGCCCTCTTGGAGCCCT
TGGTGACCATGGGCCTCGTTGGACACCTCGGGGCAGATGCGTGTCTGTTC
GCGTGGGACCAGGCGGTGATCGCCGGGTTTGACGTGATGCTGCCCCGGGT
AGCCGCGATGGTGTTGGCCGCGGCTGCGGATAAGCTCGGAGCGTGCTTGA
CGTTCGCGGTGATGTCAGAGGCCTTGATTTCGCATACGCACCTCGTTTCG
GTGAGGTGACAGGAGGCGGGCGAGAGAGAGAGAGGGAGAGAGGGAGAGAG
AGAGTGCTGGGGACGGGCAGATCAAGGGACAATCCTGGACAGGGAGAGAC
AAAAGAGCCACGTGTTCTTAAAGCCCACGAAAGTATTCACCTAAGCCTTG
GTTTCGACAAAAGTTGGCTGACGAGGGTCATCTATCGTGCTATGTGCGTA
TTCGGTTGGCAAACGAACGTGGTGCACGGAAGATTGACGCCTACGTTGCT
CAGTTTCCGGCGCCTTCTTTCGCCGTGTTGAAATCGATCCCCACACCGAC
AGACCTCCCAGCTGCAGGAGCTCATGGAAGCACACTGCATGCCCTCAATT
CGCAAGGAGATGCGGGTGTCTCACAAACTGTGTCCGGAGATAATCGGACC
AACCCTCAAGACTGCCACCGACATACTTGACAGCGCGTACTCCAAGAGGA
CGAGAGAGGCGCAGGAGGTGAGAGTCGATTTGTCCGGAGGGATCCGCCGA
GAGTCTCACTTGCTTGTTGTTTGCCGTCGGCATGTAGGGCGACGACGTTG
TGCCGAATGAGTGAAGCACGCATAATTTTCCCCCTGAGCACCTCTTACCC
CCTTTTTTAGCACCTCCAATGAAGTAGCAGTTGAGCAAAACCTGTCATCC
CTGCCACAGATGTCCAGTCTGCATTAGGGAGATTTTATCTTCTTGAGTTT
GGGGACTGCAAGGCTGACTGAATTGGATTGAGGTACACTCCTCCGTATGT
CTCGTGCGTTGCACGGGCATACACTAGGCTCGAAAGGCGCACGTGGAGCA
CACCCTAGGCCCATCCAGGGGCGGCTCCGTGCACCGGGGTCAAACCAAGG
AGCGTATCCAGCTCGATCTGTCCCGAACAGCCGTGAGAGGGTCTTCTCGT
GGTGGCAGCAACGGCAGCAATGCCAGTCTTGGGTTCGACGACGACGACGA
CGCCGGTCGTAGTAATGTCACGAAGGACAAGCCCAGGATCTCGAAAGCCC
GGGGAAACGGAGCACAAGGACGGGACAAAGGAAAGGGGCACCGTGGCGAC
GAAAAACAAGGCAGCGGTGCCAAGAAAAATGCGTCGAGTCATGCCCCCCT
CCACCGAAACGGGTCATTCGATCCCTCTGCTATCGCCGAAAATGCTGGGC
AGGCGGGGGCCTCAATGAGCGAATTCACCCGCACCCGCACCCGCGGTAGG
AATGCCAGCAACGCGTTGGCGAGGACTGGTTCTGCTGCTGTTTTAGCCGA
AGCCACAACCGCATCGAAGAAACTAGGCGTCAAGAACACCAAGCGAAAGC
TCTCGGCCGCCACCAAACGGCAGGCGAGTGTTCGCAGTACGGGAAAGGAC
GACAGCGAAGATACTGAGAGCCAAACCGAAGGTAGCAGCGAGCAGATTTC
GAGCAACGACGGCGGCCCCAACGAACAGCGTCATGATCAGAAGACCCGAA
GGAGATCGAGAGGAAGGGGCACATCGGAAAGCTACTTGTCAAACAGGGGA
ATCGGCGAGGGTGGCGAGAAGTCAGGGGCACGCTCGAAAGGCGAGCGCCG
AAACTCTCGGTCGAGACGAGCGTCTGCCGCTGCAAGTAGCGATCTTTCTG
AGGACGAGGGGAGCATGACGATTGACGGCCAGTCCGGAAACAAAGGTGGA
AGGTCTCCGACGATATCTACGTCAGTTTCAAAGGTTTGCGTCAGCGACCG
TGGCAAAGACAAGAAGAAACAAGACGGAAAAGGAAAACAGTTGGCATCTG
CCGATGATGGAGGGGAAAAAGTGATACGGCGGTCCGAAAAGGCAAAGGCG
GAAAAGAAGACCAGCAGTAGCAGGAGGACATTATCGCGTTCCCACGAGAG
AAGCAGCCAACGAGACGGAGACACGAGGAGGGAGACAAAACAGGTAAACA
GCAATATGTGTAGTTCGTTGCGTCTTCTTGCTGGCACTGGTGTTTCCCGC
GCTTCGTGGAAGTTGTCCCGCTGTACGCAAATATCTTTTCGCCTCAACTG
CCCTTGCTTTCGGGAAATCGCACATACAGTTTCTTATGCTGGAATATTAC
CGATCACGGCTTCGAAGAGCAAAGTTAGTTGTTATGAGAATTGACCTTCG
ACCCTCTCTCCGCCAAAAACAACTTTACGAAAGGGCACGGCGAAGACCCA
AGGGACCAAGTCGCAGAGGCACGCCAGCAGGGGTGTGAAATCCAGGGGTA
GCTCCGGTGCGTCAAGTGCCGATGACGGCAGGGAAGGTTCTGCCGAGACG
AAAGCAGCCCCGCCTACCGCCGCCGTGTCTCCGATCAGGAGATTGTTTGG
CGGCTTCGGAGGACTCAAGAAGAAGGCGTGA back to topCoding sequence (CDS) from alignment at Ecto-sp13_S_contig6024:1053..7333+ >mRNA_Ecto-sp13_S_contig6024.16641.1 ID=mRNA_Ecto-sp13_S_contig6024.16641.1|Name=mRNA_Ecto-sp13_S_contig6024.16641.1|organism=Ectocarpus species13 EcNAP12_S_4_19m|type=CDS|length=3330bp|location=Sequence derived from alignment at Ecto-sp13_S_contig6024:1053..7333+ (Ectocarpus species13 EcNAP12_S_4_19m) ATGACATCGACAGCCTCTAGCATGGGCGCTGTCGGTACGCCGGCTTGGGT CGTTAACGTCAGAGAGGAGATCGGTCGTTCGCCGGCGTGGGAGGTCCTTT CTGATCAGCTATTTGAGCGGGTGTCTACCGTGCTCAAGTCGCATGGCTTG GGACATTTTTCGGACCTGTCTTCGCCGGAGCAGATCACACTTCTTGAAGA AGCGCACCGCGACATCATGTCCGAGAACAACAAAGTGTATCAGGCATTCG AGTCGCAGTTCAGCAAGTCCATGGACGCAGAGATCGCTAAGGAAGCCAGA GCGAGAGTTGTCCAGGACAATCGCGAAGGCACCGAGGAAGCCCAGTACCT CGATCGCATCCTAGACTCGGCGGCTGAAGGGGCGGTGTCCCTGCTGAGAG AGCTCCCCCGGGAACACCTAGGAAGCCTGCGCCTGATGCTCAACCAAGCG GTCCCGTCAAAGACGAGGCTGGACATCTGGCGTCTGCTCCTGAAGCACAC GGCGGCGCGGGAAGAGTACGAGCTGCTGGTGAGGCAGAACCGAAACAGCA CCATATCGGGGCAGGACATCTACATCACTCACCGCTGCCAGGCAACACCG CACGTGCGCCGAAACATTTCTCTGTCGCACAAGGTCCTCCTCGAGTCTGG GAGCGTCGCTTCGCGCCGCATCCTCCCTCTCTCAAGCCGCAATGTGGTGC TCATGAAGACGGTGCTCAGCTACCACCACGCGTGCAAGATGACCAAGCGG GGACAGAAGGCCACGGCCAACATCCCTGAGTCCTTCTTGCACTTCCTGGT ACCGTTGTGCGCCGTCATCACGAGACGATCGTCGTACTCCTCCTCCTCCA GCAGCTCCAGCGCATCAGCAACGACCACAACAGCAGCAGCGTCGAGCCTG AGAGAGCAAGAGATCGATGTAATGATCGAGAGGTTGGTTGAGATGTTCGA GGGCGCCTTGGAGGCGGGGCTGGAAGGCTTGGTTGACCCGAAAGAGTTAC CGGGCGGCACCGGGGTGTCAGGCAGTGGCGCTGGAGGCGTCGCAACAATT CGAACCAAGAAATCAGCGAGGTCGCCCAAGACAGCGACCCGTGCTGCGGA AACCAAGGAGGACAGCGGGGACGGGCGTGGCAGCGCGGACAACGTTGTCC TCCCCGACTGGGTCGACAAAAGCTACGGCGTGCTTGTGCTGGGGTTCCAT GAACTGCTCGATCACGTGGCTCGCGTTCACCTGGGGCTGGCCGTAGCAGC AGCTCCATCGGAGGAAAACAAAGGTGACAGCGGTAAGACGGGGGACGGTC GAACAAACACCGACGATAGTAGTTCTTCCGCCGTCGGGGAAACCAGAGCC TCGAATGCTGCGACCGATGAGCAGCAGCATCAACCGCAGGAAAACCAGCA ACAAGGACAGGACAGGGCGACACAGCCACCATCGCCCCGGCGGACCAGCG CAGCAACAAGTCGACGCGCAGCGCTCCTGTCGCAAGGCCAACCGAGTTCC GAGGCGCCGTCACTGGGGAAAGGTTCAGATGGTGTCGATATGCCATCCTC CAGCCGGACCGACTCCACCACAGACAGCCGCACCTCCGTCCACCTGCCCG AAGTCACCGAGTACCAAGCGCGCGTTGCGTTGTGGGCCCTCTTGGAGCCC TTGGTGACCATGGGCCTCGTTGGACACCTCGGGGCAGATGCGTGTCTGTT CGCGTGGGACCAGGCGGTGATCGCCGGGTTTGACGTGATGCTGCCCCGGG TAGCCGCGATGGTGTTGGCCGCGGCTGCGGATAAGCTCGGAGCGTGCTTG ACGTTCGCGGTGATGTCAGAGGCCTTGATTTCGCATACGCACCTCGTTTC GACCTCCCAGCTGCAGGAGCTCATGGAAGCACACTGCATGCCCTCAATTC GCAAGGAGATGCGGGTGTCTCACAAACTGTGTCCGGAGATAATCGGACCA ACCCTCAAGACTGCCACCGACATACTTGACAGCGCGTACTCCAAGAGGAC GAGAGAGGCGCAGGAGGCTCGAAAGGCGCACGTGGAGCACACCCTAGGCC CATCCAGGGGCGGCTCCGTGCACCGGGGTCAAACCAAGGAGCGTATCCAG CTCGATCTGTCCCGAACAGCCGTGAGAGGGTCTTCTCGTGGTGGCAGCAA CGGCAGCAATGCCAGTCTTGGGTTCGACGACGACGACGACGCCGGTCGTA GTAATGTCACGAAGGACAAGCCCAGGATCTCGAAAGCCCGGGGAAACGGA GCACAAGGACGGGACAAAGGAAAGGGGCACCGTGGCGACGAAAAACAAGG CAGCGGTGCCAAGAAAAATGCGTCGAGTCATGCCCCCCTCCACCGAAACG GGTCATTCGATCCCTCTGCTATCGCCGAAAATGCTGGGCAGGCGGGGGCC TCAATGAGCGAATTCACCCGCACCCGCACCCGCGGTAGGAATGCCAGCAA CGCGTTGGCGAGGACTGGTTCTGCTGCTGTTTTAGCCGAAGCCACAACCG CATCGAAGAAACTAGGCGTCAAGAACACCAAGCGAAAGCTCTCGGCCGCC ACCAAACGGCAGGCGAGTGTTCGCAGTACGGGAAAGGACGACAGCGAAGA TACTGAGAGCCAAACCGAAGGTAGCAGCGAGCAGATTTCGAGCAACGACG GCGGCCCCAACGAACAGCGTCATGATCAGAAGACCCGAAGGAGATCGAGA GGAAGGGGCACATCGGAAAGCTACTTGTCAAACAGGGGAATCGGCGAGGG TGGCGAGAAGTCAGGGGCACGCTCGAAAGGCGAGCGCCGAAACTCTCGGT CGAGACGAGCGTCTGCCGCTGCAAGTAGCGATCTTTCTGAGGACGAGGGG AGCATGACGATTGACGGCCAGTCCGGAAACAAAGGTGGAAGGTCTCCGAC GATATCTACGTCAGTTTCAAAGGTTTGCGTCAGCGACCGTGGCAAAGACA AGAAGAAACAAGACGGAAAAGGAAAACAGTTGGCATCTGCCGATGATGGA GGGGAAAAAGTGATACGGCGGTCCGAAAAGGCAAAGGCGGAAAAGAAGAC CAGCAGTAGCAGGAGGACATTATCGCGTTCCCACGAGAGAAGCAGCCAAC GAGACGGAGACACGAGGAGGGAGACAAAACAGGGCACGGCGAAGACCCAA GGGACCAAGTCGCAGAGGCACGCCAGCAGGGGTGTGAAATCCAGGGGTAG CTCCGGTGCGTCAAGTGCCGATGACGGCAGGGAAGGTTCTGCCGAGACGA AAGCAGCCCCGCCTACCGCCGCCGTGTCTCCGATCAGGAGATTGTTTGGC GGCTTCGGAGGACTCAAGAAGAAGGCGTGA back to top
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